RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 TP53AIP1Q9HCN2 124 aa11.25□□□□□ -0.61
BRAT1-206ENST00000493232 FN1P02751 2386 aaKnown RBP11.23□□□□□ -0.61
BRAT1-206ENST00000493232 MOBPQ13875 183 aa11.21□□□□□ -0.61
BRAT1-206ENST00000493232 IGKV2D-30A0A075B6S6 120 aa11.21□□□□□ -0.61
BRAT1-206ENST00000493232 IGKV2-30P06310 120 aa11.21□□□□□ -0.61
BRAT1-206ENST00000493232 ELOF1P60002 83 aaKnown RBP11.21□□□□□ -0.61
BRAT1-206ENST00000493232 TLN2Q9Y4G6 2542 aa11.21□□□□□ -0.61
BRAT1-206ENST00000493232 PSPHP1O15172 72 aa11.2□□□□□ -0.62
BRAT1-206ENST00000493232 BCE1O60756 84 aa11.2□□□□□ -0.62
BRAT1-206ENST00000493232 SMIM29Q86T20 159 aa11.19□□□□□ -0.62
BRAT1-206ENST00000493232 CENPFP49454 3210 aa11.19□□□□□ -0.62
BRAT1-206ENST00000493232 CRYGAP11844 174 aa11.19□□□□□ -0.62
BRAT1-206ENST00000493232 KRTAP24-1Q3LI83 254 aa11.19□□□□□ -0.62
BRAT1-206ENST00000493232 SPACA4Q8TDM5 124 aa11.19□□□□□ -0.62
BRAT1-206ENST00000493232 CDIP1Q9H305 208 aa11.17□□□□□ -0.62
BRAT1-206ENST00000493232 Q6ZRX8 168 aa11.16□□□□□ -0.62
BRAT1-206ENST00000493232 NBDYA0A0U1RRE5 68 aa11.16□□□□□ -0.62
BRAT1-206ENST00000493232 COL4A2P08572 1712 aa11.16□□□□□ -0.62
BRAT1-206ENST00000493232 C7orf65Q6ZTY9 151 aa11.16□□□□□ -0.62
BRAT1-206ENST00000493232 Q8NBF4 154 aa11.16□□□□□ -0.62
BRAT1-206ENST00000493232 ZNF462Q96JM2 2506 aa11.14□□□□□ -0.63
BRAT1-206ENST00000493232 Q8NAQ8 132 aa11.14□□□□□ -0.63
BRAT1-206ENST00000493232 C16orf90A8MZG2 172 aa11.14□□□□□ -0.63
BRAT1-206ENST00000493232 RTL8CO15255 209 aa11.14□□□□□ -0.63
BRAT1-206ENST00000493232 KLK9Q2XQG4 91 aa11.13□□□□□ -0.63
BRAT1-206ENST00000493232 Q6ZRP5 223 aa11.13□□□□□ -0.63
BRAT1-206ENST00000493232 TET2Q6N021 2002 aaPredicted RBP11.13□□□□□ -0.63
BRAT1-206ENST00000493232 FAM229AH3BQW9 127 aa11.13□□□□□ -0.63
BRAT1-206ENST00000493232 GVQW2A0A096LPI5 108 aaPredicted RBP11.13□□□□□ -0.63
BRAT1-206ENST00000493232 LOC110117498A0A087WWA1 95 aa11.12□□□□□ -0.63
BRAT1-206ENST00000493232 PHF5AQ7RTV0 110 aaKnown RBP11.12□□□□□ -0.63
BRAT1-206ENST00000493232 H3BPC8 53 aa11.12□□□□□ -0.63
BRAT1-206ENST00000493232 ACYP2P14621 99 aa11.12□□□□□ -0.63
BRAT1-206ENST00000493232 LINC00476Q8WZB0 136 aa11.11□□□□□ -0.63
BRAT1-206ENST00000493232 FASNP49327 2511 aaKnown RBP11.11□□□□□ -0.63
BRAT1-206ENST00000493232 FAM218AQ96MZ4 157 aa11.11□□□□□ -0.63
BRAT1-206ENST00000493232 LINC00588Q9Y4M8 146 aa11.1□□□□□ -0.63
BRAT1-206ENST00000493232 USP9YO00507 2555 aaPredicted RBP11.1□□□□□ -0.63
BRAT1-206ENST00000493232 EPM2AB3EWF7 344 aa11.1□□□□□ -0.63
BRAT1-206ENST00000493232 Q6ZQT0 140 aa11.1□□□□□ -0.63
BRAT1-206ENST00000493232 Q9UF83 564 aa11.08□□□□□ -0.64
BRAT1-206ENST00000493232 A0A1B0GU69 56 aa11.08□□□□□ -0.64
BRAT1-206ENST00000493232 PTPRBP23467 1997 aa11.07□□□□□ -0.64
BRAT1-206ENST00000493232 SMCPP49901 116 aaPredicted RBP11.07□□□□□ -0.64
BRAT1-206ENST00000493232 TYMSOSQ8TAI1 123 aa11.06□□□□□ -0.64
BRAT1-206ENST00000493232 SETD2Q9BYW2 2564 aaPredicted RBP11.05□□□□□ -0.64
BRAT1-206ENST00000493232 DNAH10OSP0CZ25 163 aa11.05□□□□□ -0.64
BRAT1-206ENST00000493232 LINC00313P59037 77 aa11.05□□□□□ -0.64
BRAT1-206ENST00000493232 PRO0461Q9UI25 63 aa11.04□□□□□ -0.64
BRAT1-206ENST00000493232 PKD1L2Q7Z442 2459 aa11.03□□□□□ -0.64
BRAT1-206ENST00000493232 WWC2-AS2Q96NR7 200 aa11.03□□□□□ -0.64
BRAT1-206ENST00000493232 TRAV22A0A0B4J277 110 aa11.02□□□□□ -0.65
BRAT1-206ENST00000493232 DNAH12Q6ZR08 3092 aa11.01□□□□□ -0.65
BRAT1-206ENST00000493232 ST20-AS1Q8NBB2 130 aa11.01□□□□□ -0.65
BRAT1-206ENST00000493232 COL27A1Q8IZC6 1860 aaPredicted RBP11□□□□□ -0.65
BRAT1-206ENST00000493232 TRBV7-4A0A0J9YYF1 115 aa10.99□□□□□ -0.65
BRAT1-206ENST00000493232 CHTF8P0CG12 524 aa10.99□□□□□ -0.65
BRAT1-206ENST00000493232 VPREB1P12018 145 aa10.98□□□□□ -0.65
BRAT1-206ENST00000493232 MUC4Q99102 2169 aa10.98□□□□□ -0.65
BRAT1-206ENST00000493232 EPG5Q9HCE0 2579 aa10.98□□□□□ -0.65
BRAT1-206ENST00000493232 C8orf87E5RJ46 101 aa10.97□□□□□ -0.65
BRAT1-206ENST00000493232 IGLV6-57P01721 117 aa10.97□□□□□ -0.65
BRAT1-206ENST00000493232 PLA2G1BP04054 148 aaKnown RBP10.96□□□□□ -0.66
BRAT1-206ENST00000493232 LITAFQ99732 161 aa10.95□□□□□ -0.66
BRAT1-206ENST00000493232 LOC101927531A0A1B0GV80 90 aa10.94□□□□□ -0.66
BRAT1-206ENST00000493232 MTORP42345 2549 aa10.92□□□□□ -0.66
BRAT1-206ENST00000493232 A8MWP4 228 aa10.92□□□□□ -0.66
BRAT1-206ENST00000493232 CSNK1G2-AS1Q8NCQ2 148 aa10.92□□□□□ -0.66
BRAT1-206ENST00000493232 ATP11AUNQ6ZP68 121 aa10.91□□□□□ -0.66
BRAT1-206ENST00000493232 SPAG11AQ6PDA7 123 aa10.91□□□□□ -0.66
BRAT1-206ENST00000493232 PRO0628Q9UI54 55 aa10.91□□□□□ -0.66
BRAT1-206ENST00000493232 RPS28P62857 69 aaKnown RBP10.91□□□□□ -0.66
BRAT1-206ENST00000493232 Q96NJ1 140 aa10.91□□□□□ -0.66
BRAT1-206ENST00000493232 RPL37AP61513 92 aaKnown RBP10.9□□□□□ -0.66
BRAT1-206ENST00000493232 IGLV1-50A0A075B6I6 118 aa10.9□□□□□ -0.66
BRAT1-206ENST00000493232 KCNQ1DNQ9H478 68 aa10.9□□□□□ -0.66
BRAT1-206ENST00000493232 UTRNP46939 3433 aa10.89□□□□□ -0.67
BRAT1-206ENST00000493232 TM2D3Q9BRN9 247 aa10.88□□□□□ -0.67
BRAT1-206ENST00000493232 FAM168BA1KXE4 195 aa10.87□□□□□ -0.67
BRAT1-206ENST00000493232 MRPL34Q9BQ48 92 aaKnown RBP10.87□□□□□ -0.67
BRAT1-206ENST00000493232 SERTAD4-AS1Q5TG53 156 aa10.86□□□□□ -0.67
BRAT1-206ENST00000493232 CEP350Q5VT06 3117 aa10.86□□□□□ -0.67
BRAT1-206ENST00000493232 C19orf73Q9NVV2 129 aa10.85□□□□□ -0.67
BRAT1-206ENST00000493232 PRR34Q9NV39 138 aa10.84□□□□□ -0.67
BRAT1-206ENST00000493232 LINC00528Q8N1L1 170 aa10.84□□□□□ -0.67
BRAT1-206ENST00000493232 ERC2-IT1O76042 136 aa10.83□□□□□ -0.68
BRAT1-206ENST00000493232 K7EIL1 84 aa10.83□□□□□ -0.68
BRAT1-206ENST00000493232 POLQO75417 2590 aa10.82□□□□□ -0.68
BRAT1-206ENST00000493232 ANKRD17O75179 2603 aaKnown RBP10.82□□□□□ -0.68
BRAT1-206ENST00000493232 J3QL48 77 aa10.81□□□□□ -0.68
BRAT1-206ENST00000493232 K7EQZ3 153 aa10.81□□□□□ -0.68
BRAT1-206ENST00000493232 KRTAP10-11P60412 298 aa10.8□□□□□ -0.68
BRAT1-206ENST00000493232 SSBP3-AS1Q7Z2R9 100 aa10.8□□□□□ -0.68
BRAT1-206ENST00000493232 A0A096LNT2 108 aa10.79□□□□□ -0.68
BRAT1-206ENST00000493232 PCSK5Q92824 1860 aa10.78□□□□□ -0.68
BRAT1-206ENST00000493232 C15orf56Q8N910 161 aa10.78□□□□□ -0.68
BRAT1-206ENST00000493232 LINC00612Q8N6U2 182 aa10.78□□□□□ -0.68
BRAT1-206ENST00000493232 IGFL1Q6UW32 110 aa10.77□□□□□ -0.69
BRAT1-206ENST00000493232 ZNF861PO60384 105 aa10.77□□□□□ -0.69
BRAT1-206ENST00000493232 F8P00451 2351 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms