RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 TP73-AS1Q9UF72 201 aa6.84□□□□□ -1.31
GPNMB-214ENST00000492858 C5orf52A6NGY3 159 aa6.83□□□□□ -1.32
GPNMB-214ENST00000492858 RPL37AP8A6NKH3 93 aa6.83□□□□□ -1.32
GPNMB-214ENST00000492858 ATP5LO75964 103 aa6.83□□□□□ -1.32
GPNMB-214ENST00000492858 UBE2AP49459 152 aa6.83□□□□□ -1.32
GPNMB-214ENST00000492858 KRTAP13-1Q8IUC0 172 aa6.83□□□□□ -1.32
GPNMB-214ENST00000492858 FAM19A2Q8N3H0 131 aa6.83□□□□□ -1.32
GPNMB-214ENST00000492858 SCGB3A1Q96QR1 104 aa6.83□□□□□ -1.32
GPNMB-214ENST00000492858 TRAV12-1A0A0B4J245 112 aa6.82□□□□□ -1.32
GPNMB-214ENST00000492858 NDUFA6P56556 154 aa6.82□□□□□ -1.32
GPNMB-214ENST00000492858 PAPPA-AS1Q5QFB9 102 aa6.82□□□□□ -1.32
GPNMB-214ENST00000492858 HIST3H2BBQ8N257 126 aa6.82□□□□□ -1.32
GPNMB-214ENST00000492858 CFC1BP0CG36 223 aa6.81□□□□□ -1.32
GPNMB-214ENST00000492858 PMVKQ15126 192 aa6.81□□□□□ -1.32
GPNMB-214ENST00000492858 IFI27L1Q96BM0 104 aa6.81□□□□□ -1.32
GPNMB-214ENST00000492858 LINC00167Q96N53 147 aa6.81□□□□□ -1.32
GPNMB-214ENST00000492858 VCX2Q9H322 139 aa6.81□□□□□ -1.32
GPNMB-214ENST00000492858 CST9LQ9H4G1 147 aa6.81□□□□□ -1.32
GPNMB-214ENST00000492858 IGLV5-45A0A087WSX0 123 aa6.8□□□□□ -1.32
GPNMB-214ENST00000492858 GAGE10A6NGK3 116 aa6.8□□□□□ -1.32
GPNMB-214ENST00000492858 LEPROTL1O95214 131 aa6.8□□□□□ -1.32
GPNMB-214ENST00000492858 MT1HP80294 61 aa6.8□□□□□ -1.32
GPNMB-214ENST00000492858 TEX43Q6ZNM6 134 aa6.8□□□□□ -1.32
GPNMB-214ENST00000492858 PRSS2P07478 247 aa6.79□□□□□ -1.32
GPNMB-214ENST00000492858 IGLC3P0DOY3 106 aa6.79□□□□□ -1.32
GPNMB-214ENST00000492858 CKS1BP61024 79 aa6.79□□□□□ -1.32
GPNMB-214ENST00000492858 ZC2HC1BQ5TFG8 222 aa6.79□□□□□ -1.32
GPNMB-214ENST00000492858 Q6ZN92 141 aa6.79□□□□□ -1.32
GPNMB-214ENST00000492858 LINC01561Q8N1V8 128 aa6.79□□□□□ -1.32
GPNMB-214ENST00000492858 C3orf22Q8N5N4 141 aa6.79□□□□□ -1.32
GPNMB-214ENST00000492858 TOMM7Q9P0U1 55 aa6.79□□□□□ -1.32
GPNMB-214ENST00000492858 HSPB8Q9UJY1 196 aa6.79□□□□□ -1.32
GPNMB-214ENST00000492858 TINCRA0A1B0GVN0 87 aa6.78□□□□□ -1.32
GPNMB-214ENST00000492858 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.78□□□□□ -1.32
GPNMB-214ENST00000492858 SPAG11AQ6PDA7 123 aa6.78□□□□□ -1.32
GPNMB-214ENST00000492858 SNRPEP62304 92 aaKnown RBP6.77□□□□□ -1.33
GPNMB-214ENST00000492858 C6orf226Q5I0X4 101 aa6.77□□□□□ -1.33
GPNMB-214ENST00000492858 HIST1H2BLQ99880 126 aa6.77□□□□□ -1.33
GPNMB-214ENST00000492858 C2orf88Q9BSF0 95 aa6.77□□□□□ -1.33
GPNMB-214ENST00000492858 LORP23490 312 aaPredicted RBP6.76□□□□□ -1.33
GPNMB-214ENST00000492858 SEC11AP67812 179 aa6.76□□□□□ -1.33
GPNMB-214ENST00000492858 KRTAP19-2Q3LHN2 52 aa6.76□□□□□ -1.33
GPNMB-214ENST00000492858 F8VRH5 84 aa6.75□□□□□ -1.33
GPNMB-214ENST00000492858 SYS1-DBNDD2H3BUS1 97 aa6.75□□□□□ -1.33
GPNMB-214ENST00000492858 S100A6P06703 90 aa6.75□□□□□ -1.33
GPNMB-214ENST00000492858 KRTAP10-6P60371 365 aaPredicted RBP6.75□□□□□ -1.33
GPNMB-214ENST00000492858 HERVK_113P63121 156 aa6.75□□□□□ -1.33
GPNMB-214ENST00000492858 PRLHP81277 87 aa6.75□□□□□ -1.33
GPNMB-214ENST00000492858 LINC01545Q5VT33 79 aa6.75□□□□□ -1.33
GPNMB-214ENST00000492858 C3orf79P0CE67 100 aa6.74□□□□□ -1.33
GPNMB-214ENST00000492858 FABP4P15090 132 aa6.74□□□□□ -1.33
GPNMB-214ENST00000492858 PET117Q6UWS5 81 aa6.74□□□□□ -1.33
GPNMB-214ENST00000492858 IGKV2-28A0A075B6P5 120 aa6.73□□□□□ -1.33
GPNMB-214ENST00000492858 IGLV5-39A0A0G2JS06 123 aa6.73□□□□□ -1.33
GPNMB-214ENST00000492858 C11orf86A6NJI1 115 aa6.73□□□□□ -1.33
GPNMB-214ENST00000492858 IGKV2D-28P01615 120 aa6.73□□□□□ -1.33
GPNMB-214ENST00000492858 ZNF22P17026 224 aaPredicted RBP6.73□□□□□ -1.33
GPNMB-214ENST00000492858 Q8IZM0 81 aa6.73□□□□□ -1.33
GPNMB-214ENST00000492858 MAP1LC3CQ9BXW4 147 aa6.73□□□□□ -1.33
GPNMB-214ENST00000492858 CDKN2A-AS1Q9UH64 79 aa6.73□□□□□ -1.33
GPNMB-214ENST00000492858 CHTOPQ9Y3Y2 248 aaKnown RBP6.73□□□□□ -1.33
GPNMB-214ENST00000492858 NKAPP1Q8N9T2 125 aa6.72□□□□□ -1.33
GPNMB-214ENST00000492858 PLEKHB2Q96CS7 222 aa6.72□□□□□ -1.33
GPNMB-214ENST00000492858 IGLV5-37A0A075B6J1 123 aa6.71□□□□□ -1.34
GPNMB-214ENST00000492858 SMIM1B2RUZ4 78 aa6.71□□□□□ -1.34
GPNMB-214ENST00000492858 FAM19A1Q7Z5A9 133 aa6.71□□□□□ -1.34
GPNMB-214ENST00000492858 DAND5Q8N907 189 aa6.71□□□□□ -1.34
GPNMB-214ENST00000492858 TMEM223A0PJW6 202 aa6.7□□□□□ -1.34
GPNMB-214ENST00000492858 PLNP26678 52 aa6.7□□□□□ -1.34
GPNMB-214ENST00000492858 XP32Q5T750 250 aa6.7□□□□□ -1.34
GPNMB-214ENST00000492858 S100A2P29034 98 aa6.69□□□□□ -1.34
GPNMB-214ENST00000492858 C21orf62-AS1Q17RA5 79 aa6.69□□□□□ -1.34
GPNMB-214ENST00000492858 GEMIN7Q9H840 131 aaKnown RBP6.69□□□□□ -1.34
GPNMB-214ENST00000492858 TMEM238C9JI98 176 aa6.68□□□□□ -1.34
GPNMB-214ENST00000492858 DPM2O94777 84 aa6.68□□□□□ -1.34
GPNMB-214ENST00000492858 IGKCP01834 107 aa6.68□□□□□ -1.34
GPNMB-214ENST00000492858 Q8NBF4 154 aa6.68□□□□□ -1.34
GPNMB-214ENST00000492858 TMEM126AQ9H061 195 aa6.68□□□□□ -1.34
GPNMB-214ENST00000492858 NDUFA12Q9UI09 145 aa6.68□□□□□ -1.34
GPNMB-214ENST00000492858 CXCL5P42830 114 aa6.67□□□□□ -1.34
GPNMB-214ENST00000492858 AKR1D1P51857 326 aa6.67□□□□□ -1.34
GPNMB-214ENST00000492858 H3BRM9 83 aa6.66□□□□□ -1.34
GPNMB-214ENST00000492858 M0R2T5 61 aa6.66□□□□□ -1.34
GPNMB-214ENST00000492858 EIF4EBP3O60516 100 aaPredicted RBP6.66□□□□□ -1.34
GPNMB-214ENST00000492858 SPINK1P00995 79 aa6.66□□□□□ -1.34
GPNMB-214ENST00000492858 KRTDAPP60985 99 aa6.66□□□□□ -1.34
GPNMB-214ENST00000492858 PMCHL2Q9BQD1 86 aa6.66□□□□□ -1.34
GPNMB-214ENST00000492858 HIGD2AQ9BW72 106 aa6.66□□□□□ -1.34
GPNMB-214ENST00000492858 JOSD1Q15040 202 aaPredicted RBP6.65□□□□□ -1.34
GPNMB-214ENST00000492858 SPRR4Q96PI1 79 aa6.65□□□□□ -1.34
GPNMB-214ENST00000492858 E9PLD3 99 aa6.64□□□□□ -1.35
GPNMB-214ENST00000492858 H0Y8G0 127 aa6.64□□□□□ -1.35
GPNMB-214ENST00000492858 M0R378 163 aa6.64□□□□□ -1.35
GPNMB-214ENST00000492858 GHRHP01286 108 aa6.64□□□□□ -1.35
GPNMB-214ENST00000492858 SPINK8P0C7L1 97 aa6.64□□□□□ -1.35
GPNMB-214ENST00000492858 TMEM170BQ5T4T1 132 aa6.64□□□□□ -1.35
GPNMB-214ENST00000492858 ZNF625Q96I27 306 aaPredicted RBP6.64□□□□□ -1.35
GPNMB-214ENST00000492858 FLGP20930 4061 aaPredicted RBP6.64□□□□□ -1.35
GPNMB-214ENST00000492858 USH2AO75445 5202 aa6.63□□□□□ -1.35
GPNMB-214ENST00000492858 C20orf202A1L168 122 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms