RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 PMCHL1Q16048 86 aa7.3□□□□□ -1.24
COL6A1-205ENST00000492851 CHCHD1Q96BP2 118 aaKnown RBP7.3□□□□□ -1.24
COL6A1-205ENST00000492851 TRAV12-1A0A0B4J245 112 aa7.29□□□□□ -1.24
COL6A1-205ENST00000492851 ATP6V1G1O75348 118 aa7.29□□□□□ -1.24
COL6A1-205ENST00000492851 SCO1O75880 301 aa7.29□□□□□ -1.24
COL6A1-205ENST00000492851 LINC00304Q8N9R0 145 aa7.29□□□□□ -1.24
COL6A1-205ENST00000492851 ANAPC11Q9NYG5 84 aa7.29□□□□□ -1.24
COL6A1-205ENST00000492851 M0R378 163 aa7.28□□□□□ -1.24
COL6A1-205ENST00000492851 PRLHP81277 87 aa7.28□□□□□ -1.24
COL6A1-205ENST00000492851 KRTAP13-2Q52LG2 175 aa7.28□□□□□ -1.24
COL6A1-205ENST00000492851 CBLN2Q8IUK8 224 aa7.28□□□□□ -1.24
COL6A1-205ENST00000492851 TMEM223A0PJW6 202 aa7.27□□□□□ -1.25
COL6A1-205ENST00000492851 TMEM238C9JI98 176 aa7.27□□□□□ -1.25
COL6A1-205ENST00000492851 IFI27L1Q96BM0 104 aa7.27□□□□□ -1.25
COL6A1-205ENST00000492851 PLEKHB2Q96CS7 222 aa7.27□□□□□ -1.25
COL6A1-205ENST00000492851 HERV-K104P63124 156 aa7.26□□□□□ -1.25
COL6A1-205ENST00000492851 SPAG11AQ6PDA7 123 aa7.26□□□□□ -1.25
COL6A1-205ENST00000492851 ZNF706Q9Y5V0 76 aaPredicted RBP7.26□□□□□ -1.25
COL6A1-205ENST00000492851 S100A12P80511 92 aa7.25□□□□□ -1.25
COL6A1-205ENST00000492851 MAP1LC3CQ9BXW4 147 aa7.25□□□□□ -1.25
COL6A1-205ENST00000492851 MEIG1Q5JSS6 88 aa7.24□□□□□ -1.25
COL6A1-205ENST00000492851 HIGD2AQ9BW72 106 aa7.24□□□□□ -1.25
COL6A1-205ENST00000492851 HSBP1O75506 76 aa7.23□□□□□ -1.25
COL6A1-205ENST00000492851 A0A0U1RRA0 63 aa7.22□□□□□ -1.25
COL6A1-205ENST00000492851 MYMXA0A1B0GTQ4 84 aa7.22□□□□□ -1.25
COL6A1-205ENST00000492851 PRYO14603 147 aa7.22□□□□□ -1.25
COL6A1-205ENST00000492851 SMIM13P0DJ93 91 aa7.22□□□□□ -1.25
COL6A1-205ENST00000492851 C4orf48Q5BLP8 95 aa7.22□□□□□ -1.25
COL6A1-205ENST00000492851 BOD1L2Q8IYS8 172 aa7.22□□□□□ -1.25
COL6A1-205ENST00000492851 LINC00337Q8N6G1 96 aa7.22□□□□□ -1.25
COL6A1-205ENST00000492851 Q8NDZ9 215 aa7.22□□□□□ -1.25
COL6A1-205ENST00000492851 MUC2Q02817 5179 aa7.21□□□□□ -1.25
COL6A1-205ENST00000492851 TPRXLQ17RH7 258 aa7.21□□□□□ -1.26
COL6A1-205ENST00000492851 SPRR4Q96PI1 79 aa7.21□□□□□ -1.26
COL6A1-205ENST00000492851 CDIP1Q9H305 208 aa7.21□□□□□ -1.26
COL6A1-205ENST00000492851 KCNQ1DNQ9H478 68 aa7.21□□□□□ -1.26
COL6A1-205ENST00000492851 IGLV7-46A0A075B6I9 117 aa7.2□□□□□ -1.26
COL6A1-205ENST00000492851 MIR7-3HGQ8N6C7 128 aa7.2□□□□□ -1.26
COL6A1-205ENST00000492851 YPEL4Q96NS1 127 aa7.2□□□□□ -1.26
COL6A1-205ENST00000492851 NDUFA12Q9UI09 145 aa7.2□□□□□ -1.26
COL6A1-205ENST00000492851 ETDCA0A1B0GVM5 59 aa7.19□□□□□ -1.26
COL6A1-205ENST00000492851 SPRR1AP35321 89 aa7.19□□□□□ -1.26
COL6A1-205ENST00000492851 RETNLBQ9BQ08 111 aa7.19□□□□□ -1.26
COL6A1-205ENST00000492851 LEPROTL1O95214 131 aa7.18□□□□□ -1.26
COL6A1-205ENST00000492851 PLNP26678 52 aa7.18□□□□□ -1.26
COL6A1-205ENST00000492851 C3orf22Q8N5N4 141 aa7.18□□□□□ -1.26
COL6A1-205ENST00000492851 FAM19A2Q8N3H0 131 aa7.17□□□□□ -1.26
COL6A1-205ENST00000492851 SMCR5Q8TEV8 140 aa7.17□□□□□ -1.26
COL6A1-205ENST00000492851 LOC107984156A0A0G2JMH3 177 aa7.16□□□□□ -1.26
COL6A1-205ENST00000492851 TRBV10-2A0A0K0K1G8 114 aa7.16□□□□□ -1.26
COL6A1-205ENST00000492851 NCR3O14931 201 aa7.16□□□□□ -1.26
COL6A1-205ENST00000492851 LEPROTO15243 131 aa7.16□□□□□ -1.26
COL6A1-205ENST00000492851 HERVK_113P61574 105 aa7.16□□□□□ -1.26
COL6A1-205ENST00000492851 FP248Q71RG6 208 aaPredicted RBP7.16□□□□□ -1.26
COL6A1-205ENST00000492851 ARL17AQ8IVW1 177 aa7.16□□□□□ -1.26
COL6A1-205ENST00000492851 PPDPFQ9H3Y8 114 aa7.16□□□□□ -1.26
COL6A1-205ENST00000492851 HSPB8Q9UJY1 196 aa7.16□□□□□ -1.26
COL6A1-205ENST00000492851 H0Y8G0 127 aa7.15□□□□□ -1.26
COL6A1-205ENST00000492851 SPINK1P00995 79 aa7.15□□□□□ -1.26
COL6A1-205ENST00000492851 NMUP48645 174 aa7.15□□□□□ -1.26
COL6A1-205ENST00000492851 MIEN1Q9BRT3 115 aa7.15□□□□□ -1.26
COL6A1-205ENST00000492851 TRBV10-3A0A0K0K1G6 114 aa7.14□□□□□ -1.27
COL6A1-205ENST00000492851 KRTAP4-16G5E9R7 235 aaPredicted RBP7.14□□□□□ -1.27
COL6A1-205ENST00000492851 TRGC2P03986 189 aa7.14□□□□□ -1.27
COL6A1-205ENST00000492851 J3QQQ9 107 aa7.13□□□□□ -1.27
COL6A1-205ENST00000492851 DPM2O94777 84 aa7.13□□□□□ -1.27
COL6A1-205ENST00000492851 LINC00483Q53H64 154 aa7.13□□□□□ -1.27
COL6A1-205ENST00000492851 NDUFC2O95298 119 aa7.12□□□□□ -1.27
COL6A1-205ENST00000492851 DDTP30046 118 aa7.12□□□□□ -1.27
COL6A1-205ENST00000492851 SSBP3-AS1Q7Z2R9 100 aa7.12□□□□□ -1.27
COL6A1-205ENST00000492851 Q8NBF4 154 aa7.12□□□□□ -1.27
COL6A1-205ENST00000492851 SPANXB1Q9NS25 103 aaPredicted RBP7.12□□□□□ -1.27
COL6A1-205ENST00000492851 CBY1Q9Y3M2 126 aa7.12□□□□□ -1.27
COL6A1-205ENST00000492851 B5MCH6 92 aa7.11□□□□□ -1.27
COL6A1-205ENST00000492851 SERF1AO75920 110 aa7.11□□□□□ -1.27
COL6A1-205ENST00000492851 IGKCP01834 107 aa7.11□□□□□ -1.27
COL6A1-205ENST00000492851 LGALS3P17931 250 aaKnown RBP7.11□□□□□ -1.27
COL6A1-205ENST00000492851 JOSD1Q15040 202 aaPredicted RBP7.11□□□□□ -1.27
COL6A1-205ENST00000492851 S100A7L2Q5SY68 101 aa7.11□□□□□ -1.27
COL6A1-205ENST00000492851 RPS29P62273 56 aaKnown RBP7.1□□□□□ -1.27
COL6A1-205ENST00000492851 GAGE2AQ6NT46 116 aa7.1□□□□□ -1.27
COL6A1-205ENST00000492851 DAND5Q8N907 189 aa7.1□□□□□ -1.27
COL6A1-205ENST00000492851 FABP4P15090 132 aa7.09□□□□□ -1.27
COL6A1-205ENST00000492851 TSPEAR-AS2P59090 65 aa7.09□□□□□ -1.27
COL6A1-205ENST00000492851 Q6ZRX8 168 aa7.09□□□□□ -1.27
COL6A1-205ENST00000492851 C5orf52A6NGY3 159 aa7.08□□□□□ -1.28
COL6A1-205ENST00000492851 HINT1P49773 126 aaPredicted RBP7.08□□□□□ -1.28
COL6A1-205ENST00000492851 IGLV6-57P01721 117 aa7.07□□□□□ -1.28
COL6A1-205ENST00000492851 LINC00310P59036 64 aa7.07□□□□□ -1.28
COL6A1-205ENST00000492851 TRAV23DV6A0A075B6W5 121 aa7.06□□□□□ -1.28
COL6A1-205ENST00000492851 IGLV9-49A0A0B4J1Y8 123 aa7.05□□□□□ -1.28
COL6A1-205ENST00000492851 E9PLD3 99 aa7.05□□□□□ -1.28
COL6A1-205ENST00000492851 SLC25A20O43772 301 aa7.05□□□□□ -1.28
COL6A1-205ENST00000492851 MOBPQ13875 183 aa7.05□□□□□ -1.28
COL6A1-205ENST00000492851 Q9BRP9 147 aa7.05□□□□□ -1.28
COL6A1-205ENST00000492851 A0A0J9YXY3 114 aa7.04□□□□□ -1.28
COL6A1-205ENST00000492851 COLCA2A8K830 154 aa7.04□□□□□ -1.28
COL6A1-205ENST00000492851 ZNF73O43830 326 aaPredicted RBP7.04□□□□□ -1.28
COL6A1-205ENST00000492851 ERC2-IT1O76042 136 aa7.04□□□□□ -1.28
COL6A1-205ENST00000492851 KRTAP13-3Q3SY46 172 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms