RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 TYMSOSQ8TAI1 123 aa10.8□□□□□ -0.68
CHD1L-209ENST00000492728 PRLHP81277 87 aa10.79□□□□□ -0.68
CHD1L-209ENST00000492728 BAGE3Q86Y29 109 aa10.79□□□□□ -0.68
CHD1L-209ENST00000492728 TMEM126AQ9H061 195 aa10.77□□□□□ -0.69
CHD1L-209ENST00000492728 LOC100996750A0A140TA64 210 aa10.76□□□□□ -0.69
CHD1L-209ENST00000492728 M0R378 163 aa10.76□□□□□ -0.69
CHD1L-209ENST00000492728 TMEM170BQ5T4T1 132 aa10.76□□□□□ -0.69
CHD1L-209ENST00000492728 LCE2CQ5TA81 110 aa10.76□□□□□ -0.69
CHD1L-209ENST00000492728 YPEL4Q96NS1 127 aa10.76□□□□□ -0.69
CHD1L-209ENST00000492728 KRTAP4-6Q9BYQ5 205 aa10.76□□□□□ -0.69
CHD1L-209ENST00000492728 COX17Q14061 63 aa10.74□□□□□ -0.69
CHD1L-209ENST00000492728 FAM19A1Q7Z5A9 133 aa10.74□□□□□ -0.69
CHD1L-209ENST00000492728 FAM229BQ4G0N7 80 aa10.73□□□□□ -0.69
CHD1L-209ENST00000492728 CHTOPQ9Y3Y2 248 aaKnown RBP10.73□□□□□ -0.69
CHD1L-209ENST00000492728 TMEM223A0PJW6 202 aa10.72□□□□□ -0.69
CHD1L-209ENST00000492728 RETNLBQ9BQ08 111 aa10.72□□□□□ -0.69
CHD1L-209ENST00000492728 RPL24P83731 157 aaKnown RBP10.71□□□□□ -0.69
CHD1L-209ENST00000492728 A0A0U1RRA0 63 aa10.7□□□□□ -0.7
CHD1L-209ENST00000492728 LINC00304Q8N9R0 145 aa10.69□□□□□ -0.7
CHD1L-209ENST00000492728 MUC17Q685J3 4493 aa10.68□□□□□ -0.7
CHD1L-209ENST00000492728 TRAV12-1A0A0B4J245 112 aa10.68□□□□□ -0.7
CHD1L-209ENST00000492728 SFTA2Q6UW10 78 aa10.68□□□□□ -0.7
CHD1L-209ENST00000492728 IFI27L1Q96BM0 104 aa10.68□□□□□ -0.7
CHD1L-209ENST00000492728 PLEKHB2Q96CS7 222 aa10.68□□□□□ -0.7
CHD1L-209ENST00000492728 LINC00158P58513 81 aa10.67□□□□□ -0.7
CHD1L-209ENST00000492728 C3orf22Q8N5N4 141 aa10.67□□□□□ -0.7
CHD1L-209ENST00000492728 SMCPP49901 116 aaPredicted RBP10.66□□□□□ -0.7
CHD1L-209ENST00000492728 CHCHD1Q96BP2 118 aaKnown RBP10.66□□□□□ -0.7
CHD1L-209ENST00000492728 IGKV2D-26A0A0A0MRZ7 120 aa10.65□□□□□ -0.7
CHD1L-209ENST00000492728 SMIM13P0DJ93 91 aa10.65□□□□□ -0.7
CHD1L-209ENST00000492728 CBLN2Q8IUK8 224 aa10.65□□□□□ -0.7
CHD1L-209ENST00000492728 HIGD2AQ9BW72 106 aa10.65□□□□□ -0.7
CHD1L-209ENST00000492728 FAM19A2Q8N3H0 131 aa10.64□□□□□ -0.71
CHD1L-209ENST00000492728 FAT4Q6V0I7 4981 aa10.63□□□□□ -0.71
CHD1L-209ENST00000492728 NCR3O14931 201 aa10.61□□□□□ -0.71
CHD1L-209ENST00000492728 LINC00310P59036 64 aa10.61□□□□□ -0.71
CHD1L-209ENST00000492728 TSPEAR-AS2P59090 65 aa10.61□□□□□ -0.71
CHD1L-209ENST00000492728 MIR7-3HGQ8N6C7 128 aa10.61□□□□□ -0.71
CHD1L-209ENST00000492728 SPRR4Q96PI1 79 aa10.61□□□□□ -0.71
CHD1L-209ENST00000492728 BOD1L2Q8IYS8 172 aa10.6□□□□□ -0.71
CHD1L-209ENST00000492728 COLCA2A8K830 154 aa10.59□□□□□ -0.71
CHD1L-209ENST00000492728 SPRR1AP35321 89 aa10.59□□□□□ -0.71
CHD1L-209ENST00000492728 MEIG1Q5JSS6 88 aa10.59□□□□□ -0.71
CHD1L-209ENST00000492728 KRTAP4-16G5E9R7 235 aaPredicted RBP10.58□□□□□ -0.72
CHD1L-209ENST00000492728 H0Y8G0 127 aa10.58□□□□□ -0.72
CHD1L-209ENST00000492728 HSBP1O75506 76 aa10.58□□□□□ -0.72
CHD1L-209ENST00000492728 NDUFA12Q9UI09 145 aa10.58□□□□□ -0.72
CHD1L-209ENST00000492728 PRYO14603 147 aa10.57□□□□□ -0.72
CHD1L-209ENST00000492728 TPRXLQ17RH7 258 aa10.56□□□□□ -0.72
CHD1L-209ENST00000492728 KCNQ1DNQ9H478 68 aa10.56□□□□□ -0.72
CHD1L-209ENST00000492728 IGLV7-46A0A075B6I9 117 aa10.55□□□□□ -0.72
CHD1L-209ENST00000492728 TRBV10-3A0A0K0K1G6 114 aa10.55□□□□□ -0.72
CHD1L-209ENST00000492728 TRGC2P03986 189 aa10.55□□□□□ -0.72
CHD1L-209ENST00000492728 HERV-K104P63124 156 aa10.55□□□□□ -0.72
CHD1L-209ENST00000492728 SERF1AO75920 110 aa10.54□□□□□ -0.72
CHD1L-209ENST00000492728 LINC00337Q8N6G1 96 aa10.54□□□□□ -0.72
CHD1L-209ENST00000492728 DAND5Q8N907 189 aa10.54□□□□□ -0.72
CHD1L-209ENST00000492728 SMCR5Q8TEV8 140 aa10.54□□□□□ -0.72
CHD1L-209ENST00000492728 CTAG1AP78358 180 aa10.52□□□□□ -0.73
CHD1L-209ENST00000492728 PPDPFQ9H3Y8 114 aa10.52□□□□□ -0.73
CHD1L-209ENST00000492728 MYMXA0A1B0GTQ4 84 aa10.51□□□□□ -0.73
CHD1L-209ENST00000492728 LEPROTL1O95214 131 aa10.51□□□□□ -0.73
CHD1L-209ENST00000492728 PMCHL2Q9BQD1 86 aa10.51□□□□□ -0.73
CHD1L-209ENST00000492728 ZNF706Q9Y5V0 76 aaPredicted RBP10.51□□□□□ -0.73
CHD1L-209ENST00000492728 LEPROTO15243 131 aa10.5□□□□□ -0.73
CHD1L-209ENST00000492728 CDIP1Q9H305 208 aa10.5□□□□□ -0.73
CHD1L-209ENST00000492728 ETDCA0A1B0GVM5 59 aa10.49□□□□□ -0.73
CHD1L-209ENST00000492728 ERC2-IT1O76042 136 aa10.49□□□□□ -0.73
CHD1L-209ENST00000492728 LORP23490 312 aaPredicted RBP10.49□□□□□ -0.73
CHD1L-209ENST00000492728 Q8NBF4 154 aa10.49□□□□□ -0.73
CHD1L-209ENST00000492728 LOC107984156A0A0G2JMH3 177 aa10.48□□□□□ -0.73
CHD1L-209ENST00000492728 B5MCH6 92 aa10.48□□□□□ -0.73
CHD1L-209ENST00000492728 LINC00483Q53H64 154 aa10.48□□□□□ -0.73
CHD1L-209ENST00000492728 ARL17AQ8IVW1 177 aa10.48□□□□□ -0.73
CHD1L-209ENST00000492728 A0A0U1RQV1 116 aa10.47□□□□□ -0.73
CHD1L-209ENST00000492728 LINC00587B1AMM8 73 aa10.47□□□□□ -0.73
CHD1L-209ENST00000492728 J3QQQ9 107 aa10.47□□□□□ -0.73
CHD1L-209ENST00000492728 SPAG11AQ6PDA7 123 aa10.47□□□□□ -0.73
CHD1L-209ENST00000492728 TMA7Q9Y2S6 64 aaKnown RBP10.47□□□□□ -0.73
CHD1L-209ENST00000492728 FABP4P15090 132 aa10.46□□□□□ -0.73
CHD1L-209ENST00000492728 PLNP26678 52 aa10.46□□□□□ -0.73
CHD1L-209ENST00000492728 MAP1LC3CQ9BXW4 147 aa10.46□□□□□ -0.73
CHD1L-209ENST00000492728 EIF4EBP3O60516 100 aaPredicted RBP10.45□□□□□ -0.74
CHD1L-209ENST00000492728 Q9BRP9 147 aa10.45□□□□□ -0.74
CHD1L-209ENST00000492728 DPM2O94777 84 aa10.44□□□□□ -0.74
CHD1L-209ENST00000492728 DDTP30046 118 aa10.44□□□□□ -0.74
CHD1L-209ENST00000492728 SOSTDC1Q6X4U4 206 aa10.44□□□□□ -0.74
CHD1L-209ENST00000492728 TRBV10-2A0A0K0K1G8 114 aa10.43□□□□□ -0.74
CHD1L-209ENST00000492728 GAGE2AQ6NT46 116 aa10.43□□□□□ -0.74
CHD1L-209ENST00000492728 IGKCP01834 107 aa10.42□□□□□ -0.74
CHD1L-209ENST00000492728 HSPB8Q9UJY1 196 aa10.42□□□□□ -0.74
CHD1L-209ENST00000492728 KRTAP13-3Q3SY46 172 aa10.41□□□□□ -0.74
CHD1L-209ENST00000492728 FP248Q71RG6 208 aaPredicted RBP10.41□□□□□ -0.74
CHD1L-209ENST00000492728 SPANXB1Q9NS25 103 aaPredicted RBP10.41□□□□□ -0.74
CHD1L-209ENST00000492728 IGLV6-57P01721 117 aa10.4□□□□□ -0.74
CHD1L-209ENST00000492728 LGALS3P17931 250 aaKnown RBP10.4□□□□□ -0.74
CHD1L-209ENST00000492728 NMUP48645 174 aa10.4□□□□□ -0.74
CHD1L-209ENST00000492728 HERVK_113P61574 105 aa10.4□□□□□ -0.74
CHD1L-209ENST00000492728 MOBPQ13875 183 aa10.4□□□□□ -0.74
CHD1L-209ENST00000492728 C4orf48Q5BLP8 95 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms