RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 PMCHL2Q9BQD1 86 aa4.35□□□□□ -1.71
PDLIM1-204ENST00000492511 GAGE10A6NGK3 116 aa4.34□□□□□ -1.71
PDLIM1-204ENST00000492511 RPL37AP8A6NKH3 93 aa4.34□□□□□ -1.71
PDLIM1-204ENST00000492511 SFTA2Q6UW10 78 aa4.34□□□□□ -1.71
PDLIM1-204ENST00000492511 REG3GQ6UW15 175 aa4.34□□□□□ -1.71
PDLIM1-204ENST00000492511 A0A0U1RRA0 63 aa4.33□□□□□ -1.72
PDLIM1-204ENST00000492511 H0Y9J4 135 aa4.33□□□□□ -1.72
PDLIM1-204ENST00000492511 LEPROTO15243 131 aa4.33□□□□□ -1.72
PDLIM1-204ENST00000492511 ZNF861PO60384 105 aa4.33□□□□□ -1.72
PDLIM1-204ENST00000492511 DPM2O94777 84 aa4.33□□□□□ -1.72
PDLIM1-204ENST00000492511 IGKCP01834 107 aa4.33□□□□□ -1.72
PDLIM1-204ENST00000492511 KRTAP1-4P0C5Y4 121 aa4.33□□□□□ -1.72
PDLIM1-204ENST00000492511 SMIM13P0DJ93 91 aa4.33□□□□□ -1.72
PDLIM1-204ENST00000492511 PLNP26678 52 aa4.33□□□□□ -1.72
PDLIM1-204ENST00000492511 LINC00158P58513 81 aa4.33□□□□□ -1.72
PDLIM1-204ENST00000492511 COA6Q5JTJ3 125 aaKnown RBP4.33□□□□□ -1.72
PDLIM1-204ENST00000492511 DIRC1Q969H9 104 aa4.33□□□□□ -1.72
PDLIM1-204ENST00000492511 MAP1LC3CQ9BXW4 147 aa4.33□□□□□ -1.72
PDLIM1-204ENST00000492511 NDUFA12Q9UI09 145 aa4.33□□□□□ -1.72
PDLIM1-204ENST00000492511 IGLV1-50A0A075B6I6 118 aa4.32□□□□□ -1.72
PDLIM1-204ENST00000492511 SYS1-DBNDD2H3BUS1 97 aa4.32□□□□□ -1.72
PDLIM1-204ENST00000492511 BCE1O60756 84 aa4.32□□□□□ -1.72
PDLIM1-204ENST00000492511 LPAP08519 4548 aa4.31□□□□□ -1.72
PDLIM1-204ENST00000492511 LRP2P98164 4655 aa4.31□□□□□ -1.72
PDLIM1-204ENST00000492511 J3QQQ9 107 aa4.31□□□□□ -1.72
PDLIM1-204ENST00000492511 HERV-K104P63124 156 aa4.31□□□□□ -1.72
PDLIM1-204ENST00000492511 LINC01545Q5VT33 79 aa4.31□□□□□ -1.72
PDLIM1-204ENST00000492511 KRTAP13-1Q8IUC0 172 aa4.31□□□□□ -1.72
PDLIM1-204ENST00000492511 MIR7-3HGQ8N6C7 128 aa4.31□□□□□ -1.72
PDLIM1-204ENST00000492511 PRR26Q8N8Z3 221 aa4.31□□□□□ -1.72
PDLIM1-204ENST00000492511 NKAPP1Q8N9T2 125 aa4.31□□□□□ -1.72
PDLIM1-204ENST00000492511 PLEKHB2Q96CS7 222 aa4.31□□□□□ -1.72
PDLIM1-204ENST00000492511 IGKV2-28A0A075B6P5 120 aa4.3□□□□□ -1.72
PDLIM1-204ENST00000492511 MYMXA0A1B0GTQ4 84 aa4.3□□□□□ -1.72
PDLIM1-204ENST00000492511 TMEM238C9JI98 176 aa4.3□□□□□ -1.72
PDLIM1-204ENST00000492511 IGKV2D-28P01615 120 aa4.3□□□□□ -1.72
PDLIM1-204ENST00000492511 C3orf79P0CE67 100 aa4.3□□□□□ -1.72
PDLIM1-204ENST00000492511 RPL24P83731 157 aaKnown RBP4.3□□□□□ -1.72
PDLIM1-204ENST00000492511 PET117Q6UWS5 81 aa4.3□□□□□ -1.72
PDLIM1-204ENST00000492511 LOC107984156A0A0G2JMH3 177 aa4.29□□□□□ -1.72
PDLIM1-204ENST00000492511 E9PLD3 99 aa4.29□□□□□ -1.72
PDLIM1-204ENST00000492511 M0R378 163 aa4.29□□□□□ -1.72
PDLIM1-204ENST00000492511 ATP6V1G1O75348 118 aa4.29□□□□□ -1.72
PDLIM1-204ENST00000492511 S100A1P23297 94 aa4.29□□□□□ -1.72
PDLIM1-204ENST00000492511 HERVK_113P61574 105 aa4.29□□□□□ -1.72
PDLIM1-204ENST00000492511 MEIG1Q5JSS6 88 aa4.29□□□□□ -1.72
PDLIM1-204ENST00000492511 ARL17AQ8IVW1 177 aa4.29□□□□□ -1.72
PDLIM1-204ENST00000492511 DAND5Q8N907 189 aa4.29□□□□□ -1.72
PDLIM1-204ENST00000492511 TMEM126AQ9H061 195 aa4.29□□□□□ -1.72
PDLIM1-204ENST00000492511 A0A0J9YXY3 114 aa4.28□□□□□ -1.72
PDLIM1-204ENST00000492511 LINC00587B1AMM8 73 aa4.28□□□□□ -1.72
PDLIM1-204ENST00000492511 EIF4EBP3O60516 100 aaPredicted RBP4.28□□□□□ -1.72
PDLIM1-204ENST00000492511 LGALS3P17931 250 aaKnown RBP4.28□□□□□ -1.72
PDLIM1-204ENST00000492511 RPL28P46779 137 aaKnown RBP4.28□□□□□ -1.72
PDLIM1-204ENST00000492511 NMUP48645 174 aa4.28□□□□□ -1.72
PDLIM1-204ENST00000492511 ADAMTSL4-AS1Q5T5F5 129 aa4.28□□□□□ -1.72
PDLIM1-204ENST00000492511 BOD1L2Q8IYS8 172 aa4.28□□□□□ -1.72
PDLIM1-204ENST00000492511 IGKV2D-26A0A0A0MRZ7 120 aa4.27□□□□□ -1.73
PDLIM1-204ENST00000492511 SOSTDC1Q6X4U4 206 aa4.27□□□□□ -1.73
PDLIM1-204ENST00000492511 ANAPC11Q9NYG5 84 aa4.27□□□□□ -1.73
PDLIM1-204ENST00000492511 RNF213Q63HN8 5207 aa4.27□□□□□ -1.73
PDLIM1-204ENST00000492511 A0A087X002 238 aa4.26□□□□□ -1.73
PDLIM1-204ENST00000492511 NCR3O14931 201 aa4.26□□□□□ -1.73
PDLIM1-204ENST00000492511 UBE2AP49459 152 aa4.26□□□□□ -1.73
PDLIM1-204ENST00000492511 KRTDAPP60985 99 aa4.26□□□□□ -1.73
PDLIM1-204ENST00000492511 PRLHP81277 87 aa4.26□□□□□ -1.73
PDLIM1-204ENST00000492511 FAM19A1Q7Z5A9 133 aa4.26□□□□□ -1.73
PDLIM1-204ENST00000492511 LITAFQ99732 161 aa4.26□□□□□ -1.73
PDLIM1-204ENST00000492511 TTTY13Q9BZ97 58 aa4.26□□□□□ -1.73
PDLIM1-204ENST00000492511 TRBV10-3A0A0K0K1G6 114 aa4.25□□□□□ -1.73
PDLIM1-204ENST00000492511 KRTAP4-16G5E9R7 235 aaPredicted RBP4.25□□□□□ -1.73
PDLIM1-204ENST00000492511 SPRR1AP35321 89 aa4.25□□□□□ -1.73
PDLIM1-204ENST00000492511 HIST3H2BBQ8N257 126 aa4.25□□□□□ -1.73
PDLIM1-204ENST00000492511 KCNQ1DNQ9H478 68 aa4.25□□□□□ -1.73
PDLIM1-204ENST00000492511 NPC2P61916 151 aa4.24□□□□□ -1.73
PDLIM1-204ENST00000492511 KRTAP13-2Q52LG2 175 aa4.24□□□□□ -1.73
PDLIM1-204ENST00000492511 ANKRD39Q53RE8 183 aa4.24□□□□□ -1.73
PDLIM1-204ENST00000492511 TRBV10-2A0A0K0K1G8 114 aa4.23□□□□□ -1.73
PDLIM1-204ENST00000492511 PRYO14603 147 aa4.23□□□□□ -1.73
PDLIM1-204ENST00000492511 NDUFC2O95298 119 aa4.23□□□□□ -1.73
PDLIM1-204ENST00000492511 ATOH7Q8N100 152 aa4.23□□□□□ -1.73
PDLIM1-204ENST00000492511 LINC00337Q8N6G1 96 aa4.23□□□□□ -1.73
PDLIM1-204ENST00000492511 HIST1H2BLQ99880 126 aa4.23□□□□□ -1.73
PDLIM1-204ENST00000492511 ZNF815PA8K554 130 aa4.22□□□□□ -1.73
PDLIM1-204ENST00000492511 TIMM17BO60830 172 aa4.22□□□□□ -1.73
PDLIM1-204ENST00000492511 IGLV6-57P01721 117 aa4.22□□□□□ -1.73
PDLIM1-204ENST00000492511 DDTP30046 118 aa4.22□□□□□ -1.73
PDLIM1-204ENST00000492511 RPL13AP40429 203 aaKnown RBP4.22□□□□□ -1.73
PDLIM1-204ENST00000492511 LINC00308Q8TCZ7 52 aa4.22□□□□□ -1.73
PDLIM1-204ENST00000492511 SPANXB1Q9NS25 103 aaPredicted RBP4.22□□□□□ -1.73
PDLIM1-204ENST00000492511 C20orf202A1L168 122 aa4.21□□□□□ -1.74
PDLIM1-204ENST00000492511 B5MCH6 92 aa4.21□□□□□ -1.74
PDLIM1-204ENST00000492511 CRYGAP11844 174 aa4.21□□□□□ -1.74
PDLIM1-204ENST00000492511 FAM229BQ4G0N7 80 aa4.21□□□□□ -1.74
PDLIM1-204ENST00000492511 PCP2Q8IVA1 136 aa4.21□□□□□ -1.74
PDLIM1-204ENST00000492511 SMCR5Q8TEV8 140 aa4.21□□□□□ -1.74
PDLIM1-204ENST00000492511 HIGD2AQ9BW72 106 aa4.21□□□□□ -1.74
PDLIM1-204ENST00000492511 ERC2-IT1O76042 136 aa4.2□□□□□ -1.74
PDLIM1-204ENST00000492511 SNRPEP62304 92 aaKnown RBP4.2□□□□□ -1.74
PDLIM1-204ENST00000492511 TYMSOSQ8TAI1 123 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms