RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 C10orf91Q5T1B1 145 aa5.19□□□□□ -1.58
HDAC3-211ENST00000491581 TYMSOSQ8TAI1 123 aa5.19□□□□□ -1.58
HDAC3-211ENST00000491581 IGLV5-37A0A075B6J1 123 aa5.18□□□□□ -1.58
HDAC3-211ENST00000491581 IGLV5-39A0A0G2JS06 123 aa5.18□□□□□ -1.58
HDAC3-211ENST00000491581 RPL13AP40429 203 aaKnown RBP5.18□□□□□ -1.58
HDAC3-211ENST00000491581 RPL28P46779 137 aaKnown RBP5.18□□□□□ -1.58
HDAC3-211ENST00000491581 UBE2AP49459 152 aa5.18□□□□□ -1.58
HDAC3-211ENST00000491581 C3orf22Q8N5N4 141 aa5.18□□□□□ -1.58
HDAC3-211ENST00000491581 NKAPP1Q8N9T2 125 aa5.18□□□□□ -1.58
HDAC3-211ENST00000491581 ERG28Q9UKR5 140 aa5.18□□□□□ -1.58
HDAC3-211ENST00000491581 CARHSP1Q9Y2V2 147 aaKnown RBP5.18□□□□□ -1.58
HDAC3-211ENST00000491581 M0R378 163 aa5.17□□□□□ -1.58
HDAC3-211ENST00000491581 ATP5LO75964 103 aa5.17□□□□□ -1.58
HDAC3-211ENST00000491581 FAM19A1Q7Z5A9 133 aa5.17□□□□□ -1.58
HDAC3-211ENST00000491581 TRAPPC1Q9Y5R8 145 aa5.17□□□□□ -1.58
HDAC3-211ENST00000491581 LINC00614P0C842 121 aa5.16□□□□□ -1.58
HDAC3-211ENST00000491581 CRYGAP11844 174 aa5.16□□□□□ -1.58
HDAC3-211ENST00000491581 G0S2P27469 103 aa5.16□□□□□ -1.58
HDAC3-211ENST00000491581 TMEM170BQ5T4T1 132 aa5.16□□□□□ -1.58
HDAC3-211ENST00000491581 BAGE3Q86Y29 109 aa5.16□□□□□ -1.58
HDAC3-211ENST00000491581 TMEM126AQ9H061 195 aa5.16□□□□□ -1.58
HDAC3-211ENST00000491581 H3BRM9 83 aa5.15□□□□□ -1.59
HDAC3-211ENST00000491581 HBDP02042 147 aa5.15□□□□□ -1.59
HDAC3-211ENST00000491581 APOC3P02656 99 aa5.14□□□□□ -1.59
HDAC3-211ENST00000491581 RHEBQ15382 184 aa5.14□□□□□ -1.59
HDAC3-211ENST00000491581 YPEL4Q96NS1 127 aa5.14□□□□□ -1.59
HDAC3-211ENST00000491581 MUC17Q685J3 4493 aa5.13□□□□□ -1.59
HDAC3-211ENST00000491581 NCR3O14931 201 aa5.13□□□□□ -1.59
HDAC3-211ENST00000491581 SMIM13P0DJ93 91 aa5.13□□□□□ -1.59
HDAC3-211ENST00000491581 FAM19A2Q8N3H0 131 aa5.13□□□□□ -1.59
HDAC3-211ENST00000491581 LINC00304Q8N9R0 145 aa5.13□□□□□ -1.59
HDAC3-211ENST00000491581 PLEKHB2Q96CS7 222 aa5.13□□□□□ -1.59
HDAC3-211ENST00000491581 HIGD2AQ9BW72 106 aa5.13□□□□□ -1.59
HDAC3-211ENST00000491581 CHTOPQ9Y3Y2 248 aaKnown RBP5.13□□□□□ -1.59
HDAC3-211ENST00000491581 TMEM223A0PJW6 202 aa5.12□□□□□ -1.59
HDAC3-211ENST00000491581 A6NJY4 79 aa5.12□□□□□ -1.59
HDAC3-211ENST00000491581 H0Y8G0 127 aa5.12□□□□□ -1.59
HDAC3-211ENST00000491581 LINC00158P58513 81 aa5.12□□□□□ -1.59
HDAC3-211ENST00000491581 TSPEAR-AS2P59090 65 aa5.12□□□□□ -1.59
HDAC3-211ENST00000491581 DAND5Q8N907 189 aa5.12□□□□□ -1.59
HDAC3-211ENST00000491581 COX19Q49B96 90 aa5.11□□□□□ -1.59
HDAC3-211ENST00000491581 CBLN2Q8IUK8 224 aa5.11□□□□□ -1.59
HDAC3-211ENST00000491581 PPDPFQ9H3Y8 114 aa5.11□□□□□ -1.59
HDAC3-211ENST00000491581 IGKV2D-26A0A0A0MRZ7 120 aa5.1□□□□□ -1.59
HDAC3-211ENST00000491581 LINC00310P59036 64 aa5.1□□□□□ -1.59
HDAC3-211ENST00000491581 LINC01549A6NIU2 74 aa5.09□□□□□ -1.59
HDAC3-211ENST00000491581 FAM229BQ4G0N7 80 aa5.09□□□□□ -1.59
HDAC3-211ENST00000491581 MIR7-3HGQ8N6C7 128 aa5.09□□□□□ -1.59
HDAC3-211ENST00000491581 IFI27L1Q96BM0 104 aa5.09□□□□□ -1.59
HDAC3-211ENST00000491581 SPRR4Q96PI1 79 aa5.09□□□□□ -1.59
HDAC3-211ENST00000491581 PMCHL2Q9BQD1 86 aa5.09□□□□□ -1.59
HDAC3-211ENST00000491581 IGLV7-46A0A075B6I9 117 aa5.08□□□□□ -1.6
HDAC3-211ENST00000491581 EIF4EBP3O60516 100 aaPredicted RBP5.08□□□□□ -1.6
HDAC3-211ENST00000491581 ERC2-IT1O76042 136 aa5.08□□□□□ -1.6
HDAC3-211ENST00000491581 RPL24P83731 157 aaKnown RBP5.08□□□□□ -1.6
HDAC3-211ENST00000491581 COX17Q14061 63 aa5.08□□□□□ -1.6
HDAC3-211ENST00000491581 BOD1L2Q8IYS8 172 aa5.08□□□□□ -1.6
HDAC3-211ENST00000491581 TRBV10-3A0A0K0K1G6 114 aa5.07□□□□□ -1.6
HDAC3-211ENST00000491581 MEIG1Q5JSS6 88 aa5.07□□□□□ -1.6
HDAC3-211ENST00000491581 SMCR5Q8TEV8 140 aa5.07□□□□□ -1.6
HDAC3-211ENST00000491581 FAT4Q6V0I7 4981 aa5.07□□□□□ -1.6
HDAC3-211ENST00000491581 KRTAP4-16G5E9R7 235 aaPredicted RBP5.06□□□□□ -1.6
HDAC3-211ENST00000491581 SNAPINO95295 136 aa5.06□□□□□ -1.6
HDAC3-211ENST00000491581 NPC2P61916 151 aa5.06□□□□□ -1.6
HDAC3-211ENST00000491581 KRTAP4-1Q9BYQ7 146 aa5.06□□□□□ -1.6
HDAC3-211ENST00000491581 CDIP1Q9H305 208 aa5.06□□□□□ -1.6
HDAC3-211ENST00000491581 TRAV12-1A0A0B4J245 112 aa5.05□□□□□ -1.6
HDAC3-211ENST00000491581 SERF1AO75920 110 aa5.05□□□□□ -1.6
HDAC3-211ENST00000491581 TRGC2P03986 189 aa5.05□□□□□ -1.6
HDAC3-211ENST00000491581 KRTAP5-3Q6L8H2 238 aa5.05□□□□□ -1.6
HDAC3-211ENST00000491581 SVBPQ8N300 66 aa5.05□□□□□ -1.6
HDAC3-211ENST00000491581 Q8NBF4 154 aa5.05□□□□□ -1.6
HDAC3-211ENST00000491581 HSBP1O75506 76 aa5.04□□□□□ -1.6
HDAC3-211ENST00000491581 FABP4P15090 132 aa5.04□□□□□ -1.6
HDAC3-211ENST00000491581 SPRR1AP35321 89 aa5.04□□□□□ -1.6
HDAC3-211ENST00000491581 CHCHD1Q96BP2 118 aaKnown RBP5.04□□□□□ -1.6
HDAC3-211ENST00000491581 NDUFA12Q9UI09 145 aa5.04□□□□□ -1.6
HDAC3-211ENST00000491581 IGLV9-49A0A0B4J1Y8 123 aa5.03□□□□□ -1.6
HDAC3-211ENST00000491581 KRTAP9-7A8MTY7 169 aa5.03□□□□□ -1.6
HDAC3-211ENST00000491581 PRYO14603 147 aa5.03□□□□□ -1.6
HDAC3-211ENST00000491581 TPRXLQ17RH7 258 aa5.03□□□□□ -1.6
HDAC3-211ENST00000491581 LCE5AQ5TCM9 118 aa5.03□□□□□ -1.6
HDAC3-211ENST00000491581 GAGE2AQ6NT46 116 aa5.03□□□□□ -1.6
HDAC3-211ENST00000491581 SOSTDC1Q6X4U4 206 aa5.03□□□□□ -1.6
HDAC3-211ENST00000491581 SLC7A5P1Q8MH63 180 aa5.03□□□□□ -1.6
HDAC3-211ENST00000491581 Q9BRP9 147 aa5.03□□□□□ -1.6
HDAC3-211ENST00000491581 B5MCH6 92 aa5.02□□□□□ -1.61
HDAC3-211ENST00000491581 ATP6V1G1O75348 118 aa5.02□□□□□ -1.61
HDAC3-211ENST00000491581 MOBPQ13875 183 aa5.02□□□□□ -1.61
HDAC3-211ENST00000491581 KCNQ1DNQ9H478 68 aa5.02□□□□□ -1.61
HDAC3-211ENST00000491581 ETDCA0A1B0GVM5 59 aa5.01□□□□□ -1.61
HDAC3-211ENST00000491581 NDUFA5Q16718 116 aa5.01□□□□□ -1.61
HDAC3-211ENST00000491581 KRTAP13-3Q3SY46 172 aa5.01□□□□□ -1.61
HDAC3-211ENST00000491581 ADAMTSL4-AS1Q5T5F5 129 aa5.01□□□□□ -1.61
HDAC3-211ENST00000491581 LINC00337Q8N6G1 96 aa5.01□□□□□ -1.61
HDAC3-211ENST00000491581 ST20-AS1Q8NBB2 130 aa5.01□□□□□ -1.61
HDAC3-211ENST00000491581 LEPROTO15243 131 aa5□□□□□ -1.61
HDAC3-211ENST00000491581 LEPROTL1O95214 131 aa5□□□□□ -1.61
HDAC3-211ENST00000491581 MYMXA0A1B0GTQ4 84 aa4.99□□□□□ -1.61
HDAC3-211ENST00000491581 J3QQQ9 107 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms