RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 CDKN2A-AS1Q9UH64 79 aa6.7□□□□□ -1.34
CLCNKA-206ENST00000491433 IGKV2D-26A0A0A0MRZ7 120 aa6.69□□□□□ -1.34
CLCNKA-206ENST00000491433 COX7A2LO14548 114 aa6.69□□□□□ -1.34
CLCNKA-206ENST00000491433 SPATA45Q537H7 98 aa6.69□□□□□ -1.34
CLCNKA-206ENST00000491433 F8WDY8 70 aa6.68□□□□□ -1.34
CLCNKA-206ENST00000491433 DLEU1O43261 78 aa6.68□□□□□ -1.34
CLCNKA-206ENST00000491433 KRTAP1-4P0C5Y4 121 aa6.68□□□□□ -1.34
CLCNKA-206ENST00000491433 GEMIN7Q9H840 131 aaKnown RBP6.68□□□□□ -1.34
CLCNKA-206ENST00000491433 PAM16Q9Y3D7 125 aa6.68□□□□□ -1.34
CLCNKA-206ENST00000491433 SMIM1B2RUZ4 78 aa6.67□□□□□ -1.34
CLCNKA-206ENST00000491433 LEPROTO15243 131 aa6.67□□□□□ -1.34
CLCNKA-206ENST00000491433 COX8AP10176 69 aa6.67□□□□□ -1.34
CLCNKA-206ENST00000491433 TMEM170BQ5T4T1 132 aa6.67□□□□□ -1.34
CLCNKA-206ENST00000491433 BOD1L2Q8IYS8 172 aa6.67□□□□□ -1.34
CLCNKA-206ENST00000491433 HSBP1L1C9JCN9 74 aa6.66□□□□□ -1.34
CLCNKA-206ENST00000491433 LINC00469Q8N7U9 141 aa6.66□□□□□ -1.34
CLCNKA-206ENST00000491433 H3BRM9 83 aa6.65□□□□□ -1.34
CLCNKA-206ENST00000491433 LINC01547P58512 204 aaPredicted RBP6.65□□□□□ -1.34
CLCNKA-206ENST00000491433 TSPEAR-AS2P59090 65 aa6.65□□□□□ -1.34
CLCNKA-206ENST00000491433 HERVK_113P61574 105 aa6.64□□□□□ -1.35
CLCNKA-206ENST00000491433 UBE2BP63146 152 aa6.64□□□□□ -1.35
CLCNKA-206ENST00000491433 KIAA0087Q14695 138 aa6.64□□□□□ -1.35
CLCNKA-206ENST00000491433 PCP2Q8IVA1 136 aa6.64□□□□□ -1.35
CLCNKA-206ENST00000491433 PLEKHB2Q96CS7 222 aa6.64□□□□□ -1.35
CLCNKA-206ENST00000491433 J3QQQ9 107 aa6.63□□□□□ -1.35
CLCNKA-206ENST00000491433 TSPAN13O95857 204 aa6.63□□□□□ -1.35
CLCNKA-206ENST00000491433 SPINK8P0C7L1 97 aa6.63□□□□□ -1.35
CLCNKA-206ENST00000491433 SPAG11BQ08648 103 aa6.63□□□□□ -1.35
CLCNKA-206ENST00000491433 C5orf38Q86SI9 138 aa6.63□□□□□ -1.35
CLCNKA-206ENST00000491433 C14orf144Q96I85 54 aa6.63□□□□□ -1.35
CLCNKA-206ENST00000491433 MIEN1Q9BRT3 115 aa6.63□□□□□ -1.35
CLCNKA-206ENST00000491433 NDUFA1O15239 70 aa6.62□□□□□ -1.35
CLCNKA-206ENST00000491433 TLX1NBP0CAT3 122 aa6.62□□□□□ -1.35
CLCNKA-206ENST00000491433 C2orf91Q6ZV80 131 aa6.62□□□□□ -1.35
CLCNKA-206ENST00000491433 FAM19A5Q7Z5A7 132 aaPredicted RBP6.62□□□□□ -1.35
CLCNKA-206ENST00000491433 Q8IZM0 81 aa6.62□□□□□ -1.35
CLCNKA-206ENST00000491433 ZNF625Q96I27 306 aaPredicted RBP6.62□□□□□ -1.35
CLCNKA-206ENST00000491433 TTTY13Q9BZ97 58 aa6.62□□□□□ -1.35
CLCNKA-206ENST00000491433 PRO1933Q9H354 126 aa6.62□□□□□ -1.35
CLCNKA-206ENST00000491433 UQCR10Q9UDW1 63 aa6.62□□□□□ -1.35
CLCNKA-206ENST00000491433 TSTD3H0UI37 97 aa6.61□□□□□ -1.35
CLCNKA-206ENST00000491433 NMUP48645 174 aa6.61□□□□□ -1.35
CLCNKA-206ENST00000491433 SLC25A34Q6PIV7 304 aa6.61□□□□□ -1.35
CLCNKA-206ENST00000491433 HIGD1BQ9P298 99 aa6.61□□□□□ -1.35
CLCNKA-206ENST00000491433 MYMXA0A1B0GTQ4 84 aa6.6□□□□□ -1.35
CLCNKA-206ENST00000491433 M0QXV9 152 aa6.6□□□□□ -1.35
CLCNKA-206ENST00000491433 ZNF861PO60384 105 aa6.6□□□□□ -1.35
CLCNKA-206ENST00000491433 COX7B2Q8TF08 81 aa6.6□□□□□ -1.35
CLCNKA-206ENST00000491433 CDIP1Q9H305 208 aa6.6□□□□□ -1.35
CLCNKA-206ENST00000491433 FAM168BA1KXE4 195 aa6.59□□□□□ -1.35
CLCNKA-206ENST00000491433 KRTAP11-1Q8IUC1 163 aa6.59□□□□□ -1.35
CLCNKA-206ENST00000491433 TP73-AS1Q9UF72 201 aa6.59□□□□□ -1.35
CLCNKA-206ENST00000491433 LGALS3P17931 250 aaKnown RBP6.58□□□□□ -1.36
CLCNKA-206ENST00000491433 DDTP30046 118 aa6.58□□□□□ -1.36
CLCNKA-206ENST00000491433 GAGE2EQ4V326 116 aa6.58□□□□□ -1.36
CLCNKA-206ENST00000491433 SFTA2Q6UW10 78 aa6.58□□□□□ -1.36
CLCNKA-206ENST00000491433 TYMSOSQ8TAI1 123 aa6.58□□□□□ -1.36
CLCNKA-206ENST00000491433 ORAOV1Q8WV07 137 aa6.58□□□□□ -1.36
CLCNKA-206ENST00000491433 LITAFQ99732 161 aa6.58□□□□□ -1.36
CLCNKA-206ENST00000491433 GAGE2DQ9UEU5 116 aa6.58□□□□□ -1.36
CLCNKA-206ENST00000491433 NDUFA12Q9UI09 145 aa6.58□□□□□ -1.36
CLCNKA-206ENST00000491433 A0A0J9YXY3 114 aa6.57□□□□□ -1.36
CLCNKA-206ENST00000491433 ZNF815PA8K554 130 aa6.57□□□□□ -1.36
CLCNKA-206ENST00000491433 TIMM17BO60830 172 aa6.57□□□□□ -1.36
CLCNKA-206ENST00000491433 CRYGAP11844 174 aa6.57□□□□□ -1.36
CLCNKA-206ENST00000491433 CXCL5P42830 114 aa6.57□□□□□ -1.36
CLCNKA-206ENST00000491433 HERV-K104P63124 156 aa6.57□□□□□ -1.36
CLCNKA-206ENST00000491433 TPRXLQ17RH7 258 aa6.57□□□□□ -1.36
CLCNKA-206ENST00000491433 SPANXB1Q9NS25 103 aaPredicted RBP6.57□□□□□ -1.36
CLCNKA-206ENST00000491433 PPDPFQ9H3Y8 114 aa6.56□□□□□ -1.36
CLCNKA-206ENST00000491433 CTAG1AP78358 180 aa6.55□□□□□ -1.36
CLCNKA-206ENST00000491433 TAL2Q16559 108 aa6.55□□□□□ -1.36
CLCNKA-206ENST00000491433 C6orf226Q5I0X4 101 aa6.55□□□□□ -1.36
CLCNKA-206ENST00000491433 TRBV30A0A0K0K1B3 111 aa6.54□□□□□ -1.36
CLCNKA-206ENST00000491433 RPL28P46779 137 aaKnown RBP6.54□□□□□ -1.36
CLCNKA-206ENST00000491433 LBHQ53QV2 105 aaPredicted RBP6.54□□□□□ -1.36
CLCNKA-206ENST00000491433 UNQ6190/PRO20217Q6UXQ8 127 aa6.54□□□□□ -1.36
CLCNKA-206ENST00000491433 C6orf48Q9UBA6 75 aa6.54□□□□□ -1.36
CLCNKA-206ENST00000491433 LOC107984156A0A0G2JMH3 177 aa6.53□□□□□ -1.36
CLCNKA-206ENST00000491433 PRSS2P07478 247 aa6.53□□□□□ -1.36
CLCNKA-206ENST00000491433 ADAMTSL4-AS1Q5T5F5 129 aa6.53□□□□□ -1.36
CLCNKA-206ENST00000491433 C2orf82Q6UX34 121 aa6.53□□□□□ -1.36
CLCNKA-206ENST00000491433 Q6ZVH6 145 aa6.53□□□□□ -1.36
CLCNKA-206ENST00000491433 ARL17AQ8IVW1 177 aa6.53□□□□□ -1.36
CLCNKA-206ENST00000491433 SPANXDQ9BXN6 97 aa6.53□□□□□ -1.36
CLCNKA-206ENST00000491433 SPANXCQ9NY87 97 aa6.53□□□□□ -1.36
CLCNKA-206ENST00000491433 TOMM7Q9P0U1 55 aa6.53□□□□□ -1.36
CLCNKA-206ENST00000491433 LINC00587B1AMM8 73 aa6.52□□□□□ -1.37
CLCNKA-206ENST00000491433 NDUFC2-KCTD14E9PQ53 114 aa6.52□□□□□ -1.37
CLCNKA-206ENST00000491433 COX17Q14061 63 aa6.52□□□□□ -1.37
CLCNKA-206ENST00000491433 C10orf25Q5T742 122 aa6.52□□□□□ -1.37
CLCNKA-206ENST00000491433 KRTAP7-1Q8IUC3 87 aa6.52□□□□□ -1.37
CLCNKA-206ENST00000491433 IGLV7-46A0A075B6I9 117 aa6.51□□□□□ -1.37
CLCNKA-206ENST00000491433 A0A087X002 238 aa6.51□□□□□ -1.37
CLCNKA-206ENST00000491433 CKS1BP61024 79 aa6.51□□□□□ -1.37
CLCNKA-206ENST00000491433 HSD52Q0P140 79 aa6.51□□□□□ -1.37
CLCNKA-206ENST00000491433 PCP4L1A6NKN8 68 aa6.5□□□□□ -1.37
CLCNKA-206ENST00000491433 SCGB1D4Q6XE38 83 aa6.5□□□□□ -1.37
CLCNKA-206ENST00000491433 ERG28Q9UKR5 140 aa6.5□□□□□ -1.37
CLCNKA-206ENST00000491433 TMEM238C9JI98 176 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms