RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	ZNF625	Q96I27	306 aa	Predicted RBP	10.39	□□□□□ -0.75
GGA1-223	ENST00000491295	C11orf86	A6NJI1	115 aa		10.38	□□□□□ -0.75
GGA1-223	ENST00000491295	COMMD7	Q86VX2	200 aa		10.38	□□□□□ -0.75
GGA1-223	ENST00000491295	CBLN2	Q8IUK8	224 aa		10.38	□□□□□ -0.75
GGA1-223	ENST00000491295	SPAG11A	Q6PDA7	123 aa		10.37	□□□□□ -0.75
GGA1-223	ENST00000491295	RETNLB	Q9BQ08	111 aa		10.36	□□□□□ -0.75
GGA1-223	ENST00000491295	CDIP1	Q9H305	208 aa		10.36	□□□□□ -0.75
GGA1-223	ENST00000491295	IGLV7-46	A0A075B6I9	117 aa		10.35	□□□□□ -0.75
GGA1-223	ENST00000491295	LINC00158	P58513	81 aa		10.35	□□□□□ -0.75
GGA1-223	ENST00000491295	PMCHL1	Q16048	86 aa		10.35	□□□□□ -0.75
GGA1-223	ENST00000491295		Q8NDZ9	215 aa		10.34	□□□□□ -0.75
GGA1-223	ENST00000491295	CHTOP	Q9Y3Y2	248 aa	Known RBP	10.34	□□□□□ -0.75
GGA1-223	ENST00000491295	HIGD2A	Q9BW72	106 aa		10.33	□□□□□ -0.76
GGA1-223	ENST00000491295	ZNF706	Q9Y5V0	76 aa	Predicted RBP	10.33	□□□□□ -0.76
GGA1-223	ENST00000491295	TRAV12-1	A0A0B4J245	112 aa		10.32	□□□□□ -0.76
GGA1-223	ENST00000491295	TMEM223	A0PJW6	202 aa		10.31	□□□□□ -0.76
GGA1-223	ENST00000491295	LINC00587	B1AMM8	73 aa		10.31	□□□□□ -0.76
GGA1-223	ENST00000491295	ATP6V1G1	O75348	118 aa		10.31	□□□□□ -0.76
GGA1-223	ENST00000491295	SPRR4	Q96PI1	79 aa		10.31	□□□□□ -0.76
GGA1-223	ENST00000491295	C3orf22	Q8N5N4	141 aa		10.3	□□□□□ -0.76
GGA1-223	ENST00000491295	CHCHD1	Q96BP2	118 aa	Known RBP	10.3	□□□□□ -0.76
GGA1-223	ENST00000491295	PRY	O14603	147 aa		10.29	□□□□□ -0.76
GGA1-223	ENST00000491295	HERV-K104	P63124	156 aa		10.29	□□□□□ -0.76
GGA1-223	ENST00000491295	C4orf48	Q5BLP8	95 aa		10.29	□□□□□ -0.76
GGA1-223	ENST00000491295	LINC00337	Q8N6G1	96 aa		10.29	□□□□□ -0.76
GGA1-223	ENST00000491295	LCE2A	Q5TA79	106 aa	Predicted RBP	10.28	□□□□□ -0.76
GGA1-223	ENST00000491295	FP248	Q71RG6	208 aa	Predicted RBP	10.28	□□□□□ -0.76
GGA1-223	ENST00000491295	IFI27L1	Q96BM0	104 aa		10.28	□□□□□ -0.76
GGA1-223	ENST00000491295	PPDPF	Q9H3Y8	114 aa		10.28	□□□□□ -0.76
GGA1-223	ENST00000491295	SNAPIN	O95295	136 aa		10.27	□□□□□ -0.77
GGA1-223	ENST00000491295	KCNQ1DN	Q9H478	68 aa		10.27	□□□□□ -0.77
GGA1-223	ENST00000491295		A0A0U1RRA0	63 aa		10.26	□□□□□ -0.77
GGA1-223	ENST00000491295	SPRR1A	P35321	89 aa		10.26	□□□□□ -0.77
GGA1-223	ENST00000491295	BOD1L2	Q8IYS8	172 aa		10.26	□□□□□ -0.77
GGA1-223	ENST00000491295	SVBP	Q8N300	66 aa		10.26	□□□□□ -0.77
GGA1-223	ENST00000491295	SMIM13	P0DJ93	91 aa		10.25	□□□□□ -0.77
GGA1-223	ENST00000491295	NDUFA5	Q16718	116 aa		10.25	□□□□□ -0.77
GGA1-223	ENST00000491295	MEIG1	Q5JSS6	88 aa		10.25	□□□□□ -0.77
GGA1-223	ENST00000491295	APOC3	P02656	99 aa		10.24	□□□□□ -0.77
GGA1-223	ENST00000491295	S100A12	P80511	92 aa		10.24	□□□□□ -0.77
GGA1-223	ENST00000491295	MAP1LC3C	Q9BXW4	147 aa		10.24	□□□□□ -0.77
GGA1-223	ENST00000491295	MIR7-3HG	Q8N6C7	128 aa		10.23	□□□□□ -0.77
GGA1-223	ENST00000491295	ETDC	A0A1B0GVM5	59 aa		10.22	□□□□□ -0.77
GGA1-223	ENST00000491295	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	10.22	□□□□□ -0.77
GGA1-223	ENST00000491295	SPINK1	P00995	79 aa		10.22	□□□□□ -0.77
GGA1-223	ENST00000491295	SMCR5	Q8TEV8	140 aa		10.22	□□□□□ -0.77
GGA1-223	ENST00000491295	KRTAP9-2	Q9BYQ4	174 aa		10.22	□□□□□ -0.77
GGA1-223	ENST00000491295	MYMX	A0A1B0GTQ4	84 aa		10.21	□□□□□ -0.77
GGA1-223	ENST00000491295	NDUFA12	Q9UI09	145 aa		10.21	□□□□□ -0.77
GGA1-223	ENST00000491295		Q8NBF4	154 aa		10.2	□□□□□ -0.78
GGA1-223	ENST00000491295	LOC107984156	A0A0G2JMH3	177 aa		10.19	□□□□□ -0.78
GGA1-223	ENST00000491295	NCR3	O14931	201 aa		10.19	□□□□□ -0.78
GGA1-223	ENST00000491295	LINC00483	Q53H64	154 aa		10.19	□□□□□ -0.78
GGA1-223	ENST00000491295	ARL17A	Q8IVW1	177 aa		10.19	□□□□□ -0.78
GGA1-223	ENST00000491295	TRBV10-3	A0A0K0K1G6	114 aa		10.18	□□□□□ -0.78
GGA1-223	ENST00000491295	HSBP1	O75506	76 aa		10.18	□□□□□ -0.78
GGA1-223	ENST00000491295	YPEL4	Q96NS1	127 aa		10.18	□□□□□ -0.78
GGA1-223	ENST00000491295	TRBV10-2	A0A0K0K1G8	114 aa		10.16	□□□□□ -0.78
GGA1-223	ENST00000491295	DAND5	Q8N907	189 aa		10.16	□□□□□ -0.78
GGA1-223	ENST00000491295	RPS29	P62273	56 aa	Known RBP	10.15	□□□□□ -0.78
GGA1-223	ENST00000491295	KRTAP13-3	Q3SY46	172 aa		10.15	□□□□□ -0.78
GGA1-223	ENST00000491295	SSBP3-AS1	Q7Z2R9	100 aa		10.15	□□□□□ -0.78
GGA1-223	ENST00000491295		B5MCH6	92 aa		10.14	□□□□□ -0.79
GGA1-223	ENST00000491295	LEPROT	O15243	131 aa		10.14	□□□□□ -0.79
GGA1-223	ENST00000491295	FAM19A2	Q8N3H0	131 aa		10.14	□□□□□ -0.79
GGA1-223	ENST00000491295	FAT4	Q6V0I7	4981 aa		10.13	□□□□□ -0.79
GGA1-223	ENST00000491295	PLN	P26678	52 aa		10.13	□□□□□ -0.79
GGA1-223	ENST00000491295	GAGE2A	Q6NT46	116 aa		10.13	□□□□□ -0.79
GGA1-223	ENST00000491295	MUC17	Q685J3	4493 aa		10.12	□□□□□ -0.79
GGA1-223	ENST00000491295	LEPROTL1	O95214	131 aa		10.12	□□□□□ -0.79
GGA1-223	ENST00000491295	DDT	P30046	118 aa		10.12	□□□□□ -0.79
GGA1-223	ENST00000491295	ASB16-AS1	Q495Z4	193 aa		10.12	□□□□□ -0.79
GGA1-223	ENST00000491295	MIEN1	Q9BRT3	115 aa		10.11	□□□□□ -0.79
GGA1-223	ENST00000491295		H0Y8G0	127 aa		10.1	□□□□□ -0.79
GGA1-223	ENST00000491295	NDUFC2	O95298	119 aa		10.1	□□□□□ -0.79
GGA1-223	ENST00000491295	NMU	P48645	174 aa		10.1	□□□□□ -0.79
GGA1-223	ENST00000491295	SPANXB1	Q9NS25	103 aa	Predicted RBP	10.1	□□□□□ -0.79
GGA1-223	ENST00000491295		J3QQQ9	107 aa		10.09	□□□□□ -0.79
GGA1-223	ENST00000491295	HERVK_113	P61574	105 aa		10.09	□□□□□ -0.79
GGA1-223	ENST00000491295		Q6ZRX8	168 aa		10.09	□□□□□ -0.79
GGA1-223	ENST00000491295	TSPEAR-AS2	P59090	65 aa		10.08	□□□□□ -0.8
GGA1-223	ENST00000491295	SEC61B	P60468	96 aa	Known RBP	10.08	□□□□□ -0.8
GGA1-223	ENST00000491295	MOBP	Q13875	183 aa		10.08	□□□□□ -0.8
GGA1-223	ENST00000491295	JOSD1	Q15040	202 aa	Predicted RBP	10.08	□□□□□ -0.8
GGA1-223	ENST00000491295	HSPB8	Q9UJY1	196 aa		10.08	□□□□□ -0.8
GGA1-223	ENST00000491295	IGLV9-49	A0A0B4J1Y8	123 aa		10.07	□□□□□ -0.8
GGA1-223	ENST00000491295	SLC25A20	O43772	301 aa		10.07	□□□□□ -0.8
GGA1-223	ENST00000491295	ERC2-IT1	O76042	136 aa		10.07	□□□□□ -0.8
GGA1-223	ENST00000491295	IGLV6-57	P01721	117 aa		10.07	□□□□□ -0.8
GGA1-223	ENST00000491295	S100A7L2	Q5SY68	101 aa		10.07	□□□□□ -0.8
GGA1-223	ENST00000491295		Q8N377	158 aa		10.07	□□□□□ -0.8
GGA1-223	ENST00000491295		Q9BRP9	147 aa		10.07	□□□□□ -0.8
GGA1-223	ENST00000491295	DPM2	O94777	84 aa		10.06	□□□□□ -0.8
GGA1-223	ENST00000491295	CBY1	Q9Y3M2	126 aa		10.06	□□□□□ -0.8
GGA1-223	ENST00000491295	C5orf52	A6NGY3	159 aa		10.05	□□□□□ -0.8
GGA1-223	ENST00000491295	TRGC2	P03986	189 aa		10.05	□□□□□ -0.8
GGA1-223	ENST00000491295	LGALS3	P17931	250 aa	Known RBP	10.05	□□□□□ -0.8
GGA1-223	ENST00000491295	SERF1A	O75920	110 aa		10.04	□□□□□ -0.8
GGA1-223	ENST00000491295	IGKC	P01834	107 aa		10.03	□□□□□ -0.8
GGA1-223	ENST00000491295	TRAV23DV6	A0A075B6W5	121 aa		10.02	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms