RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 LINC00158P58513 81 aa9.09□□□□□ -0.95
COL27A1-206ENST00000490831 HERV-K104P63124 156 aa9.09□□□□□ -0.95
COL27A1-206ENST00000490831 H0Y8G0 127 aa9.08□□□□□ -0.96
COL27A1-206ENST00000490831 IGKV2-28A0A075B6P5 120 aa9.07□□□□□ -0.96
COL27A1-206ENST00000490831 IGKV2D-28P01615 120 aa9.07□□□□□ -0.96
COL27A1-206ENST00000490831 FABP4P15090 132 aa9.07□□□□□ -0.96
COL27A1-206ENST00000490831 RPL13AP40429 203 aaKnown RBP9.07□□□□□ -0.96
COL27A1-206ENST00000490831 NDUFA12Q9UI09 145 aa9.07□□□□□ -0.96
COL27A1-206ENST00000490831 LINC00587B1AMM8 73 aa9.06□□□□□ -0.96
COL27A1-206ENST00000490831 HIST1H2BKO60814 126 aa9.06□□□□□ -0.96
COL27A1-206ENST00000490831 DPM2O94777 84 aa9.06□□□□□ -0.96
COL27A1-206ENST00000490831 HIST1H2BJP06899 126 aa9.06□□□□□ -0.96
COL27A1-206ENST00000490831 SMIM13P0DJ93 91 aa9.06□□□□□ -0.96
COL27A1-206ENST00000490831 HIST1H2BOP23527 126 aa9.06□□□□□ -0.96
COL27A1-206ENST00000490831 HIST1H2BBP33778 126 aa9.06□□□□□ -0.96
COL27A1-206ENST00000490831 HIST1H2BDP58876 126 aa9.06□□□□□ -0.96
COL27A1-206ENST00000490831 HIST1H2BCP62807 126 aa9.06□□□□□ -0.96
COL27A1-206ENST00000490831 HIST2H2BEQ16778 126 aa9.06□□□□□ -0.96
COL27A1-206ENST00000490831 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.06□□□□□ -0.96
COL27A1-206ENST00000490831 HIST1H2BHQ93079 126 aa9.06□□□□□ -0.96
COL27A1-206ENST00000490831 HIST1H2BNQ99877 126 aa9.06□□□□□ -0.96
COL27A1-206ENST00000490831 HIST1H2BMQ99879 126 aa9.06□□□□□ -0.96
COL27A1-206ENST00000490831 MYMXA0A1B0GTQ4 84 aa9.05□□□□□ -0.96
COL27A1-206ENST00000490831 LEPROTO15243 131 aa9.05□□□□□ -0.96
COL27A1-206ENST00000490831 TSPEAR-AS2P59090 65 aa9.05□□□□□ -0.96
COL27A1-206ENST00000490831 PLEKHB2Q96CS7 222 aa9.05□□□□□ -0.96
COL27A1-206ENST00000490831 TMEM126AQ9H061 195 aa9.05□□□□□ -0.96
COL27A1-206ENST00000490831 A0A0U1RRA0 63 aa9.04□□□□□ -0.96
COL27A1-206ENST00000490831 M0R378 163 aa9.04□□□□□ -0.96
COL27A1-206ENST00000490831 UBE2AP49459 152 aa9.04□□□□□ -0.96
COL27A1-206ENST00000490831 MEIG1Q5JSS6 88 aa9.04□□□□□ -0.96
COL27A1-206ENST00000490831 TMEM238C9JI98 176 aa9.03□□□□□ -0.96
COL27A1-206ENST00000490831 IGKCP01834 107 aa9.03□□□□□ -0.96
COL27A1-206ENST00000490831 MIR7-3HGQ8N6C7 128 aa9.03□□□□□ -0.96
COL27A1-206ENST00000490831 MAP1LC3CQ9BXW4 147 aa9.03□□□□□ -0.96
COL27A1-206ENST00000490831 LOC107984156A0A0G2JMH3 177 aa9.02□□□□□ -0.97
COL27A1-206ENST00000490831 J3QQQ9 107 aa9.02□□□□□ -0.97
COL27A1-206ENST00000490831 ATP6V1G1O75348 118 aa9.02□□□□□ -0.97
COL27A1-206ENST00000490831 HERVK_113P61574 105 aa9.02□□□□□ -0.97
COL27A1-206ENST00000490831 ARL17AQ8IVW1 177 aa9.02□□□□□ -0.97
COL27A1-206ENST00000490831 PMCHL2Q9BQD1 86 aa9.02□□□□□ -0.97
COL27A1-206ENST00000490831 NMUP48645 174 aa9.01□□□□□ -0.97
COL27A1-206ENST00000490831 BOD1L2Q8IYS8 172 aa9.01□□□□□ -0.97
COL27A1-206ENST00000490831 A0A087X002 238 aa9□□□□□ -0.97
COL27A1-206ENST00000490831 IGKV2D-26A0A0A0MRZ7 120 aa9□□□□□ -0.97
COL27A1-206ENST00000490831 SYS1-DBNDD2H3BUS1 97 aa8.99□□□□□ -0.97
COL27A1-206ENST00000490831 CRYGAP11844 174 aa8.99□□□□□ -0.97
COL27A1-206ENST00000490831 PRLHP81277 87 aa8.99□□□□□ -0.97
COL27A1-206ENST00000490831 FAM19A1Q7Z5A9 133 aa8.99□□□□□ -0.97
COL27A1-206ENST00000490831 FAM229BQ4G0N7 80 aa8.98□□□□□ -0.97
COL27A1-206ENST00000490831 COA6Q5JTJ3 125 aaKnown RBP8.98□□□□□ -0.97
COL27A1-206ENST00000490831 E9PLD3 99 aa8.97□□□□□ -0.97
COL27A1-206ENST00000490831 LGALS3P17931 250 aaKnown RBP8.97□□□□□ -0.97
COL27A1-206ENST00000490831 PRYO14603 147 aa8.96□□□□□ -0.98
COL27A1-206ENST00000490831 SPRR1AP35321 89 aa8.96□□□□□ -0.98
COL27A1-206ENST00000490831 LINC01545Q5VT33 79 aa8.96□□□□□ -0.98
COL27A1-206ENST00000490831 KCNQ1DNQ9H478 68 aa8.96□□□□□ -0.98
COL27A1-206ENST00000490831 ANAPC11Q9NYG5 84 aa8.96□□□□□ -0.98
COL27A1-206ENST00000490831 KRTAP13-2Q52LG2 175 aa8.95□□□□□ -0.98
COL27A1-206ENST00000490831 PET117Q6UWS5 81 aa8.95□□□□□ -0.98
COL27A1-206ENST00000490831 NCR3O14931 201 aa8.94□□□□□ -0.98
COL27A1-206ENST00000490831 LINC00337Q8N6G1 96 aa8.94□□□□□ -0.98
COL27A1-206ENST00000490831 DAND5Q8N907 189 aa8.94□□□□□ -0.98
COL27A1-206ENST00000490831 TYMSOSQ8TAI1 123 aa8.94□□□□□ -0.98
COL27A1-206ENST00000490831 TRBV10-2A0A0K0K1G8 114 aa8.93□□□□□ -0.98
COL27A1-206ENST00000490831 KRTAP4-16G5E9R7 235 aaPredicted RBP8.93□□□□□ -0.98
COL27A1-206ENST00000490831 A0A0J9YXY3 114 aa8.92□□□□□ -0.98
COL27A1-206ENST00000490831 TRBV10-3A0A0K0K1G6 114 aa8.92□□□□□ -0.98
COL27A1-206ENST00000490831 NDUFC2O95298 119 aa8.91□□□□□ -0.98
COL27A1-206ENST00000490831 SPANXB1Q9NS25 103 aaPredicted RBP8.91□□□□□ -0.98
COL27A1-206ENST00000490831 LPAP08519 4548 aa8.91□□□□□ -0.98
COL27A1-206ENST00000490831 C3orf79P0CE67 100 aa8.9□□□□□ -0.98
COL27A1-206ENST00000490831 ADAMTSL4-AS1Q5T5F5 129 aa8.9□□□□□ -0.98
COL27A1-206ENST00000490831 HIGD2AQ9BW72 106 aa8.9□□□□□ -0.98
COL27A1-206ENST00000490831 SOSTDC1Q6X4U4 206 aa8.89□□□□□ -0.99
COL27A1-206ENST00000490831 MIEN1Q9BRT3 115 aa8.89□□□□□ -0.99
COL27A1-206ENST00000490831 DDTP30046 118 aa8.88□□□□□ -0.99
COL27A1-206ENST00000490831 SPRR4Q96PI1 79 aa8.88□□□□□ -0.99
COL27A1-206ENST00000490831 LITAFQ99732 161 aa8.88□□□□□ -0.99
COL27A1-206ENST00000490831 ETDCA0A1B0GVM5 59 aa8.87□□□□□ -0.99
COL27A1-206ENST00000490831 EIF4EBP3O60516 100 aaPredicted RBP8.87□□□□□ -0.99
COL27A1-206ENST00000490831 TIMM17BO60830 172 aa8.87□□□□□ -0.99
COL27A1-206ENST00000490831 IGLV6-57P01721 117 aa8.87□□□□□ -0.99
COL27A1-206ENST00000490831 CTAG1AP78358 180 aa8.87□□□□□ -0.99
COL27A1-206ENST00000490831 S100A12P80511 92 aa8.87□□□□□ -0.99
COL27A1-206ENST00000490831 SMCR5Q8TEV8 140 aa8.86□□□□□ -0.99
COL27A1-206ENST00000490831 ZNF706Q9Y5V0 76 aaPredicted RBP8.86□□□□□ -0.99
COL27A1-206ENST00000490831 RNF213Q63HN8 5207 aa8.85□□□□□ -0.99
COL27A1-206ENST00000490831 B5MCH6 92 aa8.85□□□□□ -0.99
COL27A1-206ENST00000490831 TSPAN13O95857 204 aa8.85□□□□□ -0.99
COL27A1-206ENST00000490831 KRTDAPP60985 99 aa8.85□□□□□ -0.99
COL27A1-206ENST00000490831 LINC00304Q8N9R0 145 aa8.84□□□□□ -0.99
COL27A1-206ENST00000490831 ZNF815PA8K554 130 aa8.83□□□□□ -1
COL27A1-206ENST00000490831 PRR4Q16378 134 aa8.83□□□□□ -1
COL27A1-206ENST00000490831 C3orf22Q8N5N4 141 aa8.83□□□□□ -1
COL27A1-206ENST00000490831 LINC00308Q8TCZ7 52 aa8.83□□□□□ -1
COL27A1-206ENST00000490831 C20orf202A1L168 122 aa8.82□□□□□ -1
COL27A1-206ENST00000490831 NPC2P61916 151 aa8.82□□□□□ -1
COL27A1-206ENST00000490831 LINC00483Q53H64 154 aa8.82□□□□□ -1
COL27A1-206ENST00000490831 S100A7L2Q5SY68 101 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms