RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 SLC7A5P1Q8MH63 180 aa18.58■□□□□ 0.56
LDB1-204ENST00000490751 LPAP08519 4548 aa18.56■□□□□ 0.56
LDB1-204ENST00000490751 TMEM238C9JI98 176 aa18.56■□□□□ 0.56
LDB1-204ENST00000490751 H0Y8G0 127 aa18.56■□□□□ 0.56
LDB1-204ENST00000490751 TMEM126AQ9H061 195 aa18.56■□□□□ 0.56
LDB1-204ENST00000490751 SERF1AO75920 110 aa18.55■□□□□ 0.56
LDB1-204ENST00000490751 CRYGAP11844 174 aa18.55■□□□□ 0.56
LDB1-204ENST00000490751 LINC00310P59036 64 aa18.55■□□□□ 0.56
LDB1-204ENST00000490751 PRLHP81277 87 aa18.55■□□□□ 0.56
LDB1-204ENST00000490751 LEPROTL1O95214 131 aa18.54■□□□□ 0.56
LDB1-204ENST00000490751 FAM19A1Q7Z5A9 133 aa18.53■□□□□ 0.56
LDB1-204ENST00000490751 ANAPC11Q9NYG5 84 aa18.53■□□□□ 0.56
LDB1-204ENST00000490751 SMIM13P0DJ93 91 aa18.52■□□□□ 0.56
LDB1-204ENST00000490751 M0R378 163 aa18.51■□□□□ 0.55
LDB1-204ENST00000490751 MEIG1Q5JSS6 88 aa18.51■□□□□ 0.55
LDB1-204ENST00000490751 TYMSOSQ8TAI1 123 aa18.5■□□□□ 0.55
LDB1-204ENST00000490751 ATP6V1G1O75348 118 aa18.49■□□□□ 0.55
LDB1-204ENST00000490751 HERV-K104P63124 156 aa18.49■□□□□ 0.55
LDB1-204ENST00000490751 RNF213Q63HN8 5207 aa18.49■□□□□ 0.55
LDB1-204ENST00000490751 NDUFA12Q9UI09 145 aa18.48■□□□□ 0.55
LDB1-204ENST00000490751 COLCA2A8K830 154 aa18.46■□□□□ 0.55
LDB1-204ENST00000490751 TSPAN13O95857 204 aa18.45■□□□□ 0.54
LDB1-204ENST00000490751 MIR7-3HGQ8N6C7 128 aa18.45■□□□□ 0.54
LDB1-204ENST00000490751 PRR4Q16378 134 aa18.44■□□□□ 0.54
LDB1-204ENST00000490751 HSPB8Q9UJY1 196 aa18.44■□□□□ 0.54
LDB1-204ENST00000490751 MYMXA0A1B0GTQ4 84 aa18.43■□□□□ 0.54
LDB1-204ENST00000490751 FABP4P15090 132 aa18.43■□□□□ 0.54
LDB1-204ENST00000490751 FAM229BQ4G0N7 80 aa18.43■□□□□ 0.54
LDB1-204ENST00000490751 KRTAP13-2Q52LG2 175 aa18.43■□□□□ 0.54
LDB1-204ENST00000490751 BOD1L2Q8IYS8 172 aa18.43■□□□□ 0.54
LDB1-204ENST00000490751 LINC00587B1AMM8 73 aa18.41■□□□□ 0.54
LDB1-204ENST00000490751 PLNP26678 52 aa18.41■□□□□ 0.54
LDB1-204ENST00000490751 TSPEAR-AS2P59090 65 aa18.41■□□□□ 0.54
LDB1-204ENST00000490751 LEPROTO15243 131 aa18.39■□□□□ 0.53
LDB1-204ENST00000490751 PLEKHB2Q96CS7 222 aa18.38■□□□□ 0.53
LDB1-204ENST00000490751 PMCHL2Q9BQD1 86 aa18.38■□□□□ 0.53
LDB1-204ENST00000490751 MAP1LC3CQ9BXW4 147 aa18.38■□□□□ 0.53
LDB1-204ENST00000490751 NCR3O14931 201 aa18.37■□□□□ 0.53
LDB1-204ENST00000490751 DPM2O94777 84 aa18.37■□□□□ 0.53
LDB1-204ENST00000490751 HIGD2AQ9BW72 106 aa18.37■□□□□ 0.53
LDB1-204ENST00000490751 HERVK_113P61574 105 aa18.34■□□□□ 0.53
LDB1-204ENST00000490751 IGKV2D-26A0A0A0MRZ7 120 aa18.33■□□□□ 0.52
LDB1-204ENST00000490751 J3QQQ9 107 aa18.33■□□□□ 0.52
LDB1-204ENST00000490751 PRYO14603 147 aa18.33■□□□□ 0.52
LDB1-204ENST00000490751 IGKCP01834 107 aa18.33■□□□□ 0.52
LDB1-204ENST00000490751 DAND5Q8N907 189 aa18.3■□□□□ 0.52
LDB1-204ENST00000490751 LINC00304Q8N9R0 145 aa18.29■□□□□ 0.52
LDB1-204ENST00000490751 KCNQ1DNQ9H478 68 aa18.28■□□□□ 0.52
LDB1-204ENST00000490751 TRBV10-3A0A0K0K1G6 114 aa18.27■□□□□ 0.52
LDB1-204ENST00000490751 LGALS3P17931 250 aaKnown RBP18.27■□□□□ 0.52
LDB1-204ENST00000490751 NMUP48645 174 aa18.27■□□□□ 0.52
LDB1-204ENST00000490751 SPRR1AP35321 89 aa18.26■□□□□ 0.51
LDB1-204ENST00000490751 LINC00337Q8N6G1 96 aa18.26■□□□□ 0.51
LDB1-204ENST00000490751 LOC107984156A0A0G2JMH3 177 aa18.24■□□□□ 0.51
LDB1-204ENST00000490751 ARL17AQ8IVW1 177 aa18.24■□□□□ 0.51
LDB1-204ENST00000490751 SPRR4Q96PI1 79 aa18.24■□□□□ 0.51
LDB1-204ENST00000490751 C3orf22Q8N5N4 141 aa18.23■□□□□ 0.51
LDB1-204ENST00000490751 ETDCA0A1B0GVM5 59 aa18.22■□□□□ 0.51
LDB1-204ENST00000490751 KRTAP4-16G5E9R7 235 aaPredicted RBP18.21■□□□□ 0.51
LDB1-204ENST00000490751 HIST1H2BKO60814 126 aa18.21■□□□□ 0.51
LDB1-204ENST00000490751 HIST1H2BJP06899 126 aa18.21■□□□□ 0.51
LDB1-204ENST00000490751 HIST1H2BOP23527 126 aa18.21■□□□□ 0.51
LDB1-204ENST00000490751 HIST1H2BBP33778 126 aa18.21■□□□□ 0.51
LDB1-204ENST00000490751 HIST1H2BDP58876 126 aa18.21■□□□□ 0.51
LDB1-204ENST00000490751 HIST1H2BCP62807 126 aa18.21■□□□□ 0.51
LDB1-204ENST00000490751 HIST2H2BEQ16778 126 aa18.21■□□□□ 0.51
LDB1-204ENST00000490751 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.21■□□□□ 0.51
LDB1-204ENST00000490751 HIST1H2BHQ93079 126 aa18.21■□□□□ 0.51
LDB1-204ENST00000490751 HIST1H2BNQ99877 126 aa18.21■□□□□ 0.51
LDB1-204ENST00000490751 HIST1H2BMQ99879 126 aa18.21■□□□□ 0.51
LDB1-204ENST00000490751 ZNF706Q9Y5V0 76 aaPredicted RBP18.2■□□□□ 0.5
LDB1-204ENST00000490751 S100A12P80511 92 aa18.19■□□□□ 0.5
LDB1-204ENST00000490751 MIEN1Q9BRT3 115 aa18.19■□□□□ 0.5
LDB1-204ENST00000490751 TRBV10-2A0A0K0K1G8 114 aa18.17■□□□□ 0.5
LDB1-204ENST00000490751 SMCR5Q8TEV8 140 aa18.17■□□□□ 0.5
LDB1-204ENST00000490751 E9PLD3 99 aa18.16■□□□□ 0.5
LDB1-204ENST00000490751 SYS1-DBNDD2H3BUS1 97 aa18.16■□□□□ 0.5
LDB1-204ENST00000490751 DDTP30046 118 aa18.16■□□□□ 0.5
LDB1-204ENST00000490751 RETNLBQ9BQ08 111 aa18.16■□□□□ 0.5
LDB1-204ENST00000490751 SPANXB1Q9NS25 103 aaPredicted RBP18.15■□□□□ 0.5
LDB1-204ENST00000490751 A0A0J9YXY3 114 aa18.13■□□□□ 0.49
LDB1-204ENST00000490751 NDUFC2O95298 119 aa18.11■□□□□ 0.49
LDB1-204ENST00000490751 B5MCH6 92 aa18.1■□□□□ 0.49
LDB1-204ENST00000490751 NPC2P61916 151 aa18.1■□□□□ 0.49
LDB1-204ENST00000490751 CTAG1AP78358 180 aa18.1■□□□□ 0.49
LDB1-204ENST00000490751 SOSTDC1Q6X4U4 206 aa18.1■□□□□ 0.49
LDB1-204ENST00000490751 ADAMTSL4-AS1Q5T5F5 129 aa18.09■□□□□ 0.49
LDB1-204ENST00000490751 PPDPFQ9H3Y8 114 aa18.09■□□□□ 0.49
LDB1-204ENST00000490751 S100A7L2Q5SY68 101 aa18.07■□□□□ 0.48
LDB1-204ENST00000490751 LINC01545Q5VT33 79 aa18.07■□□□□ 0.48
LDB1-204ENST00000490751 EIF4EBP3O60516 100 aaPredicted RBP18.06■□□□□ 0.48
LDB1-204ENST00000490751 IGLV6-57P01721 117 aa18.05■□□□□ 0.48
LDB1-204ENST00000490751 PET117Q6UWS5 81 aa18.05■□□□□ 0.48
LDB1-204ENST00000490751 SPAG11AQ6PDA7 123 aa18.04■□□□□ 0.48
LDB1-204ENST00000490751 ERC2-IT1O76042 136 aa18.02■□□□□ 0.48
LDB1-204ENST00000490751 LINC00483Q53H64 154 aa18.02■□□□□ 0.48
LDB1-204ENST00000490751 Q6ZRX8 168 aa18.02■□□□□ 0.48
LDB1-204ENST00000490751 GAGE2AQ6NT46 116 aa18.01■□□□□ 0.47
LDB1-204ENST00000490751 Q9BRP9 147 aa18.01■□□□□ 0.47
LDB1-204ENST00000490751 TRAV23DV6A0A075B6W5 121 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms