RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 CMC2Q9NRP2 79 aa1.69□□□□□ -2.14
TM9SF3-206ENST00000490192 ARL2-SNX15V9GYD0 113 aa1.69□□□□□ -2.14
TM9SF3-206ENST00000490192 PIN1P1O15428 100 aa1.68□□□□□ -2.14
TM9SF3-206ENST00000490192 PRB3Q04118 309 aaPredicted RBP1.68□□□□□ -2.14
TM9SF3-206ENST00000490192 COX17Q14061 63 aa1.68□□□□□ -2.14
TM9SF3-206ENST00000490192 DEFB110Q30KQ9 67 aa1.68□□□□□ -2.14
TM9SF3-206ENST00000490192 Q5BKY6 102 aa1.68□□□□□ -2.14
TM9SF3-206ENST00000490192 LINC01590Q5TEZ4 76 aa1.68□□□□□ -2.14
TM9SF3-206ENST00000490192 PRO3102Q9H379 93 aa1.68□□□□□ -2.14
TM9SF3-206ENST00000490192 C10orf95Q9H7T3 257 aa1.68□□□□□ -2.14
TM9SF3-206ENST00000490192 BRCA2P51587 3418 aa1.68□□□□□ -2.14
TM9SF3-206ENST00000490192 FAM223AQ8IWN6 122 aa1.67□□□□□ -2.14
TM9SF3-206ENST00000490192 CEP350Q5VT06 3117 aa1.66□□□□□ -2.14
TM9SF3-206ENST00000490192 CADP27708 2225 aa1.66□□□□□ -2.14
TM9SF3-206ENST00000490192 NMBP08949 121 aa1.66□□□□□ -2.14
TM9SF3-206ENST00000490192 DEFB133Q30KQ1 61 aa1.66□□□□□ -2.14
TM9SF3-206ENST00000490192 C9orf62Q8N4C0 152 aa1.66□□□□□ -2.14
TM9SF3-206ENST00000490192 TTTY10Q9BZA0 68 aa1.66□□□□□ -2.14
TM9SF3-206ENST00000490192 U3KQA8 63 aa1.66□□□□□ -2.14
TM9SF3-206ENST00000490192 DNAH12Q6ZR08 3092 aa1.66□□□□□ -2.14
TM9SF3-206ENST00000490192 CENPFP49454 3210 aa1.65□□□□□ -2.14
TM9SF3-206ENST00000490192 ATOX1O00244 68 aa1.65□□□□□ -2.15
TM9SF3-206ENST00000490192 NDUFC1O43677 76 aa1.65□□□□□ -2.15
TM9SF3-206ENST00000490192 IGLC1P0CG04 106 aa1.65□□□□□ -2.15
TM9SF3-206ENST00000490192 RPS27P42677 84 aaKnown RBP1.65□□□□□ -2.15
TM9SF3-206ENST00000490192 ABRACLQ9P1F3 81 aa1.65□□□□□ -2.15
TM9SF3-206ENST00000490192 CHD7Q9P2D1 2997 aa1.65□□□□□ -2.15
TM9SF3-206ENST00000490192 PDCD5O14737 125 aa1.64□□□□□ -2.15
TM9SF3-206ENST00000490192 LINC00472Q9H8W2 130 aa1.64□□□□□ -2.15
TM9SF3-206ENST00000490192 FCGBPQ9Y6R7 5405 aaPredicted RBP1.64□□□□□ -2.15
TM9SF3-206ENST00000490192 SNRPGP15A8MWD9 76 aa1.63□□□□□ -2.15
TM9SF3-206ENST00000490192 CFDP00746 253 aaPredicted RBP1.63□□□□□ -2.15
TM9SF3-206ENST00000490192 UBE2DNLQ8IWF7 75 aa1.63□□□□□ -2.15
TM9SF3-206ENST00000490192 TOMM5Q8N4H5 51 aa1.63□□□□□ -2.15
TM9SF3-206ENST00000490192 TRANK1O15050 2925 aa1.62□□□□□ -2.15
TM9SF3-206ENST00000490192 H3BSH0 61 aa1.62□□□□□ -2.15
TM9SF3-206ENST00000490192 M0R3E3 92 aa1.62□□□□□ -2.15
TM9SF3-206ENST00000490192 GNG2P59768 71 aa1.62□□□□□ -2.15
TM9SF3-206ENST00000490192 S100A16Q96FQ6 103 aaKnown RBP1.62□□□□□ -2.15
TM9SF3-206ENST00000490192 CACFD1Q9UGQ2 172 aa1.62□□□□□ -2.15
TM9SF3-206ENST00000490192 MGPP08493 103 aa1.61□□□□□ -2.15
TM9SF3-206ENST00000490192 SERP2Q8N6R1 65 aa1.61□□□□□ -2.15
TM9SF3-206ENST00000490192 V9GYS6 101 aa1.61□□□□□ -2.15
TM9SF3-206ENST00000490192 RANBP2P49792 3224 aaKnown RBP1.61□□□□□ -2.15
TM9SF3-206ENST00000490192 FAM223BA6NKX1 122 aa1.6□□□□□ -2.15
TM9SF3-206ENST00000490192 FAUP35544 74 aaKnown RBP1.6□□□□□ -2.15
TM9SF3-206ENST00000490192 HAMPP81172 84 aa1.6□□□□□ -2.15
TM9SF3-206ENST00000490192 ASXL3Q9C0F0 2248 aa1.6□□□□□ -2.15
TM9SF3-206ENST00000490192 CDH23Q9H251 3354 aa1.6□□□□□ -2.15
TM9SF3-206ENST00000490192 MKI67P46013 3256 aaKnown RBP1.6□□□□□ -2.15
TM9SF3-206ENST00000490192 UNC80Q8N2C7 3258 aa1.59□□□□□ -2.15
TM9SF3-206ENST00000490192 LAMA3Q16787 3333 aa1.59□□□□□ -2.15
TM9SF3-206ENST00000490192 FXYD6-FXYD2A0A087WZ82 144 aa1.59□□□□□ -2.15
TM9SF3-206ENST00000490192 CYB5AP00167 134 aa1.59□□□□□ -2.15
TM9SF3-206ENST00000490192 SPINK7P58062 85 aa1.59□□□□□ -2.15
TM9SF3-206ENST00000490192 ALKAL2Q6UX46 152 aa1.59□□□□□ -2.15
TM9SF3-206ENST00000490192 ARHGAP5-AS1Q96IT6 56 aa1.59□□□□□ -2.15
TM9SF3-206ENST00000490192 TRGV9Q99603 122 aa1.59□□□□□ -2.15
TM9SF3-206ENST00000490192 FXYD6Q9H0Q3 95 aa1.59□□□□□ -2.15
TM9SF3-206ENST00000490192 XIRP2A4UGR9 3374 aa1.59□□□□□ -2.16
TM9SF3-206ENST00000490192 SZT2Q5T011 3432 aa1.59□□□□□ -2.16
TM9SF3-206ENST00000490192 SPTBN5Q9NRC6 3674 aaKnown RBP1.59□□□□□ -2.16
TM9SF3-206ENST00000490192 SAA2P0DJI9 122 aaPredicted RBP1.58□□□□□ -2.16
TM9SF3-206ENST00000490192 C6orf201Q7Z4U5 140 aa1.58□□□□□ -2.16
TM9SF3-206ENST00000490192 NMES1Q9C002 83 aa1.58□□□□□ -2.16
TM9SF3-206ENST00000490192 REV3LO60673 3130 aa1.58□□□□□ -2.16
TM9SF3-206ENST00000490192 H7BZZ5 65 aa1.57□□□□□ -2.16
TM9SF3-206ENST00000490192 PIGYQ3MUY2 71 aa1.57□□□□□ -2.16
TM9SF3-206ENST00000490192 SSBP3-AS1Q7Z2R9 100 aa1.57□□□□□ -2.16
TM9SF3-206ENST00000490192 DEFB123Q8N688 67 aa1.57□□□□□ -2.16
TM9SF3-206ENST00000490192 TENM1Q9UKZ4 2725 aa1.56□□□□□ -2.16
TM9SF3-206ENST00000490192 LAMA2P24043 3122 aaKnown RBP1.56□□□□□ -2.16
TM9SF3-206ENST00000490192 TRBV7-7A0A0K0K1E9 115 aa1.56□□□□□ -2.16
TM9SF3-206ENST00000490192 KANTRA0A1W2PQU2 76 aa1.56□□□□□ -2.16
TM9SF3-206ENST00000490192 ASIPP42127 132 aa1.56□□□□□ -2.16
TM9SF3-206ENST00000490192 NMSQ5H8A3 153 aa1.56□□□□□ -2.16
TM9SF3-206ENST00000490192 Q6JHZ5 121 aa1.56□□□□□ -2.16
TM9SF3-206ENST00000490192 SPRR4Q96PI1 79 aa1.56□□□□□ -2.16
TM9SF3-206ENST00000490192 ZNF815PA8K554 130 aa1.55□□□□□ -2.16
TM9SF3-206ENST00000490192 IQCF6A8MYZ5 107 aa1.55□□□□□ -2.16
TM9SF3-206ENST00000490192 MRPL33O75394 65 aaKnown RBP1.55□□□□□ -2.16
TM9SF3-206ENST00000490192 HMGN3Q15651 99 aa1.55□□□□□ -2.16
TM9SF3-206ENST00000490192 MYO7BQ6PIF6 2116 aa1.55□□□□□ -2.16
TM9SF3-206ENST00000490192 C5orf42Q9H799 3197 aa1.54□□□□□ -2.16
TM9SF3-206ENST00000490192 SYS1-DBNDD2H3BUS1 97 aa1.54□□□□□ -2.16
TM9SF3-206ENST00000490192 SFTA3P0C7M3 94 aa1.54□□□□□ -2.16
TM9SF3-206ENST00000490192 DEFA5Q01523 94 aa1.54□□□□□ -2.16
TM9SF3-206ENST00000490192 FDCSPQ8NFU4 85 aa1.54□□□□□ -2.16
TM9SF3-206ENST00000490192 S100A13Q99584 98 aa1.54□□□□□ -2.16
TM9SF3-206ENST00000490192 PDE4DIPQ5VU43 2346 aa1.54□□□□□ -2.16
TM9SF3-206ENST00000490192 TRBV25-1A0A075B6N4 114 aa1.53□□□□□ -2.16
TM9SF3-206ENST00000490192 PMCHL1Q16048 86 aa1.53□□□□□ -2.16
TM9SF3-206ENST00000490192 DEFB124Q8NES8 71 aa1.53□□□□□ -2.16
TM9SF3-206ENST00000490192 TNRC18O15417 2968 aaPredicted RBP1.53□□□□□ -2.17
TM9SF3-206ENST00000490192 C7orf77A4D0Y5 90 aa1.52□□□□□ -2.17
TM9SF3-206ENST00000490192 UMAD1C9J7I0 102 aa1.52□□□□□ -2.17
TM9SF3-206ENST00000490192 IAPPP10997 89 aa1.52□□□□□ -2.17
TM9SF3-206ENST00000490192 PEA15Q15121 130 aa1.52□□□□□ -2.17
TM9SF3-206ENST00000490192 DEFB109BQ30KR1 87 aa1.52□□□□□ -2.17
TM9SF3-206ENST00000490192 SPATA8Q6RVD6 105 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms