RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 USP9YO00507 2555 aaPredicted RBP6.15□□□□□ -1.42
LSAMP-205ENST00000490035 SOSTDC1Q6X4U4 206 aa6.15□□□□□ -1.42
LSAMP-205ENST00000490035 KIAA0087Q14695 138 aa6.15□□□□□ -1.43
LSAMP-205ENST00000490035 Q8NBF4 154 aa6.15□□□□□ -1.43
LSAMP-205ENST00000490035 LINC00315P59091 139 aa6.14□□□□□ -1.43
LSAMP-205ENST00000490035 EDN2P20800 178 aa6.14□□□□□ -1.43
LSAMP-205ENST00000490035 MOBPQ13875 183 aa6.14□□□□□ -1.43
LSAMP-205ENST00000490035 TRBV7-4A0A0J9YYF1 115 aa6.14□□□□□ -1.43
LSAMP-205ENST00000490035 C16orf90A8MZG2 172 aa6.14□□□□□ -1.43
LSAMP-205ENST00000490035 C7orf65Q6ZTY9 151 aa6.14□□□□□ -1.43
LSAMP-205ENST00000490035 SETD2Q9BYW2 2564 aaPredicted RBP6.13□□□□□ -1.43
LSAMP-205ENST00000490035 Q6ZQT0 140 aa6.13□□□□□ -1.43
LSAMP-205ENST00000490035 Q6ZRX8 168 aa6.13□□□□□ -1.43
LSAMP-205ENST00000490035 TRAV22A0A0B4J277 110 aa6.13□□□□□ -1.43
LSAMP-205ENST00000490035 C8orf87E5RJ46 101 aa6.13□□□□□ -1.43
LSAMP-205ENST00000490035 PSPHP1O15172 72 aa6.13□□□□□ -1.43
LSAMP-205ENST00000490035 PCOTHQ58A44 107 aa6.12□□□□□ -1.43
LSAMP-205ENST00000490035 RETNQ9HD89 108 aa6.12□□□□□ -1.43
LSAMP-205ENST00000490035 SPAG11AQ6PDA7 123 aa6.12□□□□□ -1.43
LSAMP-205ENST00000490035 PRLHP81277 87 aa6.12□□□□□ -1.43
LSAMP-205ENST00000490035 LINC00167Q96N53 147 aa6.11□□□□□ -1.43
LSAMP-205ENST00000490035 LINC00313P59037 77 aa6.11□□□□□ -1.43
LSAMP-205ENST00000490035 C6orf48Q9UBA6 75 aa6.11□□□□□ -1.43
LSAMP-205ENST00000490035 LOC101927531A0A1B0GV80 90 aa6.11□□□□□ -1.43
LSAMP-205ENST00000490035 Q6ZRP5 223 aa6.1□□□□□ -1.43
LSAMP-205ENST00000490035 SMIM29Q86T20 159 aa6.1□□□□□ -1.43
LSAMP-205ENST00000490035 CYP4F30PQ9H0H9 118 aa6.1□□□□□ -1.43
LSAMP-205ENST00000490035 A0A1W2PPR1 153 aa6.09□□□□□ -1.43
LSAMP-205ENST00000490035 SPTBN4Q9H254 2564 aa6.09□□□□□ -1.43
LSAMP-205ENST00000490035 X6R8D5 127 aa6.09□□□□□ -1.43
LSAMP-205ENST00000490035 DNAH10OSP0CZ25 163 aa6.08□□□□□ -1.44
LSAMP-205ENST00000490035 KRTAP10-9P60411 292 aa6.08□□□□□ -1.44
LSAMP-205ENST00000490035 PRO0461Q9UI25 63 aa6.08□□□□□ -1.44
LSAMP-205ENST00000490035 IGLV6-57P01721 117 aa6.08□□□□□ -1.44
LSAMP-205ENST00000490035 RPL37AP61513 92 aaKnown RBP6.08□□□□□ -1.44
LSAMP-205ENST00000490035 EP400Q96L91 3159 aa6.08□□□□□ -1.44
LSAMP-205ENST00000490035 MDFIQ99750 246 aa6.08□□□□□ -1.44
LSAMP-205ENST00000490035 FAM229AH3BQW9 127 aa6.07□□□□□ -1.44
LSAMP-205ENST00000490035 LINC00476Q8WZB0 136 aa6.07□□□□□ -1.44
LSAMP-205ENST00000490035 SMR3AQ99954 134 aa6.07□□□□□ -1.44
LSAMP-205ENST00000490035 IGKV2D-30A0A075B6S6 120 aa6.07□□□□□ -1.44
LSAMP-205ENST00000490035 IGKV2-30P06310 120 aa6.07□□□□□ -1.44
LSAMP-205ENST00000490035 A8MTW9 85 aa6.06□□□□□ -1.44
LSAMP-205ENST00000490035 A8MWP4 228 aa6.06□□□□□ -1.44
LSAMP-205ENST00000490035 ACANP16112 2415 aa6.04□□□□□ -1.44
LSAMP-205ENST00000490035 SMCPP49901 116 aaPredicted RBP6.04□□□□□ -1.44
LSAMP-205ENST00000490035 DEFB116Q30KQ4 102 aa6.04□□□□□ -1.44
LSAMP-205ENST00000490035 SPINK1P00995 79 aa6.03□□□□□ -1.44
LSAMP-205ENST00000490035 VPREB1P12018 145 aa6.03□□□□□ -1.44
LSAMP-205ENST00000490035 Q8NAQ8 132 aa6.03□□□□□ -1.44
LSAMP-205ENST00000490035 NBDYA0A0U1RRE5 68 aa6.03□□□□□ -1.44
LSAMP-205ENST00000490035 TYMSOSQ8TAI1 123 aa6.03□□□□□ -1.44
LSAMP-205ENST00000490035 PLA2G2DQ9UNK4 145 aa6.02□□□□□ -1.45
LSAMP-205ENST00000490035 CHD8Q9HCK8 2581 aa6.02□□□□□ -1.45
LSAMP-205ENST00000490035 EPM2AB3EWF7 344 aa6.02□□□□□ -1.45
LSAMP-205ENST00000490035 MTORP42345 2549 aa6.01□□□□□ -1.45
LSAMP-205ENST00000490035 KCNQ1DNQ9H478 68 aa6.01□□□□□ -1.45
LSAMP-205ENST00000490035 RETNLBQ9BQ08 111 aa6.01□□□□□ -1.45
LSAMP-205ENST00000490035 SPACA4Q8TDM5 124 aa6.01□□□□□ -1.45
LSAMP-205ENST00000490035 FAM218AQ96MZ4 157 aa6.01□□□□□ -1.45
LSAMP-205ENST00000490035 PLA2G1BP04054 148 aaKnown RBP6□□□□□ -1.45
LSAMP-205ENST00000490035 RTL8CO15255 209 aa6□□□□□ -1.45
LSAMP-205ENST00000490035 MRPL34Q9BQ48 92 aaKnown RBP5.99□□□□□ -1.45
LSAMP-205ENST00000490035 SSBP3-AS1Q7Z2R9 100 aa5.99□□□□□ -1.45
LSAMP-205ENST00000490035 KLKP1Q107X0 134 aa5.99□□□□□ -1.45
LSAMP-205ENST00000490035 ATP11AUNQ6ZP68 121 aa5.99□□□□□ -1.45
LSAMP-205ENST00000490035 UQCR11O14957 56 aa5.98□□□□□ -1.45
LSAMP-205ENST00000490035 TLX1NBP0CAT3 122 aa5.98□□□□□ -1.45
LSAMP-205ENST00000490035 LITAFQ99732 161 aa5.97□□□□□ -1.45
LSAMP-205ENST00000490035 LINC00588Q9Y4M8 146 aa5.97□□□□□ -1.45
LSAMP-205ENST00000490035 SERTAD4-AS1Q5TG53 156 aa5.96□□□□□ -1.45
LSAMP-205ENST00000490035 TM2D3Q9BRN9 247 aa5.96□□□□□ -1.46
LSAMP-205ENST00000490035 CEP295Q9C0D2 2601 aa5.96□□□□□ -1.46
LSAMP-205ENST00000490035 PHF5AQ7RTV0 110 aaKnown RBP5.96□□□□□ -1.46
LSAMP-205ENST00000490035 PRR34Q9NV39 138 aa5.96□□□□□ -1.46
LSAMP-205ENST00000490035 ZNF462Q96JM2 2506 aa5.95□□□□□ -1.46
LSAMP-205ENST00000490035 ST20-AS1Q8NBB2 130 aa5.95□□□□□ -1.46
LSAMP-205ENST00000490035 IGLV1-50A0A075B6I6 118 aa5.95□□□□□ -1.46
LSAMP-205ENST00000490035 LINC00528Q8N1L1 170 aa5.94□□□□□ -1.46
LSAMP-205ENST00000490035 CR1P17927 2039 aa5.94□□□□□ -1.46
LSAMP-205ENST00000490035 CSNK1G2-AS1Q8NCQ2 148 aa5.94□□□□□ -1.46
LSAMP-205ENST00000490035 SPANXA2-OT1Q8N9U9 137 aa5.94□□□□□ -1.46
LSAMP-205ENST00000490035 WWC2-AS2Q96NR7 200 aa5.94□□□□□ -1.46
LSAMP-205ENST00000490035 CENPFP49454 3210 aa5.93□□□□□ -1.46
LSAMP-205ENST00000490035 PRR15Q8IV56 129 aa5.93□□□□□ -1.46
LSAMP-205ENST00000490035 C4orf26Q17RF5 130 aa5.92□□□□□ -1.46
LSAMP-205ENST00000490035 Q96NJ1 140 aa5.92□□□□□ -1.46
LSAMP-205ENST00000490035 COA5Q86WW8 74 aa5.91□□□□□ -1.46
LSAMP-205ENST00000490035 ZNF861PO60384 105 aa5.91□□□□□ -1.46
LSAMP-205ENST00000490035 Q9UF83 564 aa5.91□□□□□ -1.46
LSAMP-205ENST00000490035 A0A1B0GVX0 72 aa5.9□□□□□ -1.46
LSAMP-205ENST00000490035 K7EQZ3 153 aa5.9□□□□□ -1.47
LSAMP-205ENST00000490035 LINC00612Q8N6U2 182 aa5.89□□□□□ -1.47
LSAMP-205ENST00000490035 FASNP49327 2511 aaKnown RBP5.89□□□□□ -1.47
LSAMP-205ENST00000490035 LINC01600Q96MT4 127 aa5.89□□□□□ -1.47
LSAMP-205ENST00000490035 CRIPTQ9P021 101 aa5.88□□□□□ -1.47
LSAMP-205ENST00000490035 C8orf17Q9NRJ1 99 aa5.88□□□□□ -1.47
LSAMP-205ENST00000490035 C19orf73Q9NVV2 129 aa5.87□□□□□ -1.47
LSAMP-205ENST00000490035 IGFL1Q6UW32 110 aa5.87□□□□□ -1.47
LSAMP-205ENST00000490035 KRTAP24-1Q3LI83 254 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms