RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 COL4A2P08572 1712 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 TRIOO75962 3097 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 ZGRF1Q86YA3 2104 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 BPTFQ12830 3046 aa1.25□□□□□ -2.21
HMGN1-218ENST00000490032 TNRC6BQ9UPQ9 1833 aaKnown RBP1.24□□□□□ -2.21
HMGN1-218ENST00000490032 KNTC1P50748 2209 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 CACNA1CQ13936 2221 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 SPAG17Q6Q759 2223 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 LRRK2Q5S007 2527 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 SPEGQ15772 3267 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 UBR5O95071 2799 aaPredicted RBP1.24□□□□□ -2.21
HMGN1-218ENST00000490032 ITPR1Q14643 2758 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 LOC110117498A0A087WWA1 95 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 IGHV1-18A0A0C4DH31 117 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 SPTY2D1-AS1A0A0U1RR47 76 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 IGIPA6NJ69 53 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 HCG22E2RYF7 251 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 E7EQL1 145 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 LY6LH3BQJ8 138 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 H3BRN7 92 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 H7BZZ5 65 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 K7ERS5 55 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 STATHP02808 62 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 CTSGP08311 255 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 CCL3P10147 92 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 COX6B1P14854 86 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 SS18Q15532 418 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 PATE2Q6UY27 113 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 ZNF833PQ6ZTB9 187 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 DEFB119Q8N690 84 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 LINC00308Q8TCZ7 52 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 C4orf3Q8WVX3 66 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 CLEC2BQ92478 149 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 CCL17Q92583 94 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 BPESC1Q9GZL8 116 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 FGF23Q9GZV9 251 aaPredicted RBP1.24□□□□□ -2.21
HMGN1-218ENST00000490032 LINC00574Q9H8X3 128 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 SND1-IT1Q9HBX3 110 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 C8orf17Q9NRJ1 99 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 ZZEF1O43149 2961 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 USP9YO00507 2555 aaPredicted RBP1.24□□□□□ -2.21
HMGN1-218ENST00000490032 TEX15Q9BXT5 2789 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 PIEZO2Q9H5I5 2752 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 CFAP46Q8IYW2 2715 aa1.24□□□□□ -2.21
HMGN1-218ENST00000490032 DSCAMO60469 2012 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 DSPP15924 2871 aaKnown RBP1.23□□□□□ -2.21
HMGN1-218ENST00000490032 FRYQ5TBA9 3013 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 IGHV3-43A0A0B4J1X8 118 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 IGHV3-72A0A0B4J1Y9 119 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 FAM223BA6NKX1 122 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 K7EIM0 57 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 CD24P25063 80 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 RNASE4P34096 147 aaKnown RBP1.23□□□□□ -2.21
HMGN1-218ENST00000490032 POLR2KP53803 58 aaKnown RBP1.23□□□□□ -2.21
HMGN1-218ENST00000490032 SPAG11BQ08648 103 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 DEFB114Q30KQ6 69 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 LINC01554Q52M75 96 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 RPL39P5Q59GN2 51 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 SPAG11AQ6PDA7 123 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.23□□□□□ -2.21
HMGN1-218ENST00000490032 FAM223AQ8IWN6 122 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 Q8N814 137 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 USMG5Q96IX5 58 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 OBSCN-AS1Q96MR7 158 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 GAFA1Q96PS6 74 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 B9D2Q9BPU9 175 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 WFDC10AQ9H1F0 79 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 C14orf132Q9NPU4 83 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 CDC42SE1Q9NRR8 79 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 LINC00846Q9NV44 126 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 CCL26Q9Y258 94 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 F8P00451 2351 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 SPTBN1Q01082 2364 aaKnown RBP1.23□□□□□ -2.21
HMGN1-218ENST00000490032 VPS13AQ96RL7 3174 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 MUC22E2RYF6 1773 aaPredicted RBP1.23□□□□□ -2.21
HMGN1-218ENST00000490032 TENM4Q6N022 2769 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 INTS1Q8N201 2190 aaKnown RBP1.23□□□□□ -2.21
HMGN1-218ENST00000490032 SPG11Q96JI7 2443 aa1.23□□□□□ -2.21
HMGN1-218ENST00000490032 PI4KAP42356 2102 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 NAV3Q8IVL0 2385 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 AKAP13Q12802 2813 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 ITPR3Q14573 2671 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 IGHV6-1A0A0B4J1U7 121 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 IGKV1D-43A0A0B4J1Z2 117 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 TRAV22A0A0B4J277 110 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 IGHV1-3A0A0C4DH29 117 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 TRBV10-1A0A0K0K1A3 114 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 ETDCA0A1B0GVM5 59 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 A8MUN3 132 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 LECT2O14960 151 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 FSTL3O95633 263 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 CRIP1P50238 77 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 C6orf99Q4VX62 202 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 MINOS1Q5TGZ0 78 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 LINC00322Q6ZN03 302 aaPredicted RBP1.22□□□□□ -2.21
HMGN1-218ENST00000490032 WFDC5Q8TCV5 224 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 COX7B2Q8TF08 81 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 LINC00208Q96KT6 92 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 TP53AIP1Q9HCN2 124 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 LINC00588Q9Y4M8 146 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms