RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 TMEM223A0PJW6 202 aa11.24□□□□□ -0.61
TNFRSF1B-202ENST00000489921 APOC3P02656 99 aa11.24□□□□□ -0.61
TNFRSF1B-202ENST00000489921 CHTOPQ9Y3Y2 248 aaKnown RBP11.24□□□□□ -0.61
TNFRSF1B-202ENST00000489921 SFTA2Q6UW10 78 aa11.23□□□□□ -0.61
TNFRSF1B-202ENST00000489921 LINC00304Q8N9R0 145 aa11.23□□□□□ -0.61
TNFRSF1B-202ENST00000489921 RETNLBQ9BQ08 111 aa11.23□□□□□ -0.61
TNFRSF1B-202ENST00000489921 MUC17Q685J3 4493 aa11.21□□□□□ -0.61
TNFRSF1B-202ENST00000489921 TRAV12-1A0A0B4J245 112 aa11.21□□□□□ -0.61
TNFRSF1B-202ENST00000489921 IGKV2D-26A0A0A0MRZ7 120 aa11.2□□□□□ -0.62
TNFRSF1B-202ENST00000489921 LINC00158P58513 81 aa11.2□□□□□ -0.62
TNFRSF1B-202ENST00000489921 A0A0U1RRA0 63 aa11.19□□□□□ -0.62
TNFRSF1B-202ENST00000489921 SNAPINO95295 136 aa11.19□□□□□ -0.62
TNFRSF1B-202ENST00000489921 CBLN2Q8IUK8 224 aa11.19□□□□□ -0.62
TNFRSF1B-202ENST00000489921 SVBPQ8N300 66 aa11.19□□□□□ -0.62
TNFRSF1B-202ENST00000489921 C3orf22Q8N5N4 141 aa11.19□□□□□ -0.62
TNFRSF1B-202ENST00000489921 IFI27L1Q96BM0 104 aa11.19□□□□□ -0.62
TNFRSF1B-202ENST00000489921 CHCHD1Q96BP2 118 aaKnown RBP11.19□□□□□ -0.62
TNFRSF1B-202ENST00000489921 FAT4Q6V0I7 4981 aa11.18□□□□□ -0.62
TNFRSF1B-202ENST00000489921 SMIM13P0DJ93 91 aa11.17□□□□□ -0.62
TNFRSF1B-202ENST00000489921 HIGD2AQ9BW72 106 aa11.16□□□□□ -0.62
TNFRSF1B-202ENST00000489921 CTAG1AP78358 180 aa11.15□□□□□ -0.62
TNFRSF1B-202ENST00000489921 SPRR4Q96PI1 79 aa11.14□□□□□ -0.63
TNFRSF1B-202ENST00000489921 SPRR1AP35321 89 aa11.13□□□□□ -0.63
TNFRSF1B-202ENST00000489921 FAM19A2Q8N3H0 131 aa11.13□□□□□ -0.63
TNFRSF1B-202ENST00000489921 KRTAP4-16G5E9R7 235 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1B-202ENST00000489921 NDUFA5Q16718 116 aa11.12□□□□□ -0.63
TNFRSF1B-202ENST00000489921 TPRXLQ17RH7 258 aa11.12□□□□□ -0.63
TNFRSF1B-202ENST00000489921 MIR7-3HGQ8N6C7 128 aa11.12□□□□□ -0.63
TNFRSF1B-202ENST00000489921 BOD1L2Q8IYS8 172 aa11.11□□□□□ -0.63
TNFRSF1B-202ENST00000489921 KCNQ1DNQ9H478 68 aa11.11□□□□□ -0.63
TNFRSF1B-202ENST00000489921 IGLV7-46A0A075B6I9 117 aa11.1□□□□□ -0.63
TNFRSF1B-202ENST00000489921 PRYO14603 147 aa11.1□□□□□ -0.63
TNFRSF1B-202ENST00000489921 NCR3O14931 201 aa11.09□□□□□ -0.63
TNFRSF1B-202ENST00000489921 LINC00310P59036 64 aa11.09□□□□□ -0.63
TNFRSF1B-202ENST00000489921 HERV-K104P63124 156 aa11.09□□□□□ -0.63
TNFRSF1B-202ENST00000489921 LINC00337Q8N6G1 96 aa11.09□□□□□ -0.63
TNFRSF1B-202ENST00000489921 TSPEAR-AS2P59090 65 aa11.08□□□□□ -0.64
TNFRSF1B-202ENST00000489921 MEIG1Q5JSS6 88 aa11.08□□□□□ -0.64
TNFRSF1B-202ENST00000489921 LCE2AQ5TA79 106 aaPredicted RBP11.08□□□□□ -0.64
TNFRSF1B-202ENST00000489921 NDUFA12Q9UI09 145 aa11.08□□□□□ -0.64
TNFRSF1B-202ENST00000489921 HSBP1O75506 76 aa11.07□□□□□ -0.64
TNFRSF1B-202ENST00000489921 TRBV10-3A0A0K0K1G6 114 aa11.06□□□□□ -0.64
TNFRSF1B-202ENST00000489921 A0A0U1RQV1 116 aa11.06□□□□□ -0.64
TNFRSF1B-202ENST00000489921 ATP6V1G1O75348 118 aa11.06□□□□□ -0.64
TNFRSF1B-202ENST00000489921 SMCR5Q8TEV8 140 aa11.06□□□□□ -0.64
TNFRSF1B-202ENST00000489921 CDIP1Q9H305 208 aa11.06□□□□□ -0.64
TNFRSF1B-202ENST00000489921 LOC107984156A0A0G2JMH3 177 aa11.05□□□□□ -0.64
TNFRSF1B-202ENST00000489921 SPAG11AQ6PDA7 123 aa11.05□□□□□ -0.64
TNFRSF1B-202ENST00000489921 ARL17AQ8IVW1 177 aa11.05□□□□□ -0.64
TNFRSF1B-202ENST00000489921 MYMXA0A1B0GTQ4 84 aa11.04□□□□□ -0.64
TNFRSF1B-202ENST00000489921 TRGC2P03986 189 aa11.04□□□□□ -0.64
TNFRSF1B-202ENST00000489921 PPDPFQ9H3Y8 114 aa11.04□□□□□ -0.64
TNFRSF1B-202ENST00000489921 ZNF706Q9Y5V0 76 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF1B-202ENST00000489921 LINC00587B1AMM8 73 aa11.03□□□□□ -0.64
TNFRSF1B-202ENST00000489921 H0Y8G0 127 aa11.03□□□□□ -0.64
TNFRSF1B-202ENST00000489921 DAND5Q8N907 189 aa11.03□□□□□ -0.64
TNFRSF1B-202ENST00000489921 LEPROTO15243 131 aa11.02□□□□□ -0.65
TNFRSF1B-202ENST00000489921 SERF1AO75920 110 aa11.02□□□□□ -0.65
TNFRSF1B-202ENST00000489921 LINC00483Q53H64 154 aa11.02□□□□□ -0.65
TNFRSF1B-202ENST00000489921 B5MCH6 92 aa11.01□□□□□ -0.65
TNFRSF1B-202ENST00000489921 LEPROTL1O95214 131 aa11.01□□□□□ -0.65
TNFRSF1B-202ENST00000489921 Q8NBF4 154 aa11.01□□□□□ -0.65
TNFRSF1B-202ENST00000489921 ETDCA0A1B0GVM5 59 aa11□□□□□ -0.65
TNFRSF1B-202ENST00000489921 ERC2-IT1O76042 136 aa11□□□□□ -0.65
TNFRSF1B-202ENST00000489921 MAP1LC3CQ9BXW4 147 aa10.99□□□□□ -0.65
TNFRSF1B-202ENST00000489921 TRBV10-2A0A0K0K1G8 114 aa10.97□□□□□ -0.65
TNFRSF1B-202ENST00000489921 J3QQQ9 107 aa10.97□□□□□ -0.65
TNFRSF1B-202ENST00000489921 PLNP26678 52 aa10.97□□□□□ -0.65
TNFRSF1B-202ENST00000489921 FP248Q71RG6 208 aaPredicted RBP10.97□□□□□ -0.65
TNFRSF1B-202ENST00000489921 Q9BRP9 147 aa10.97□□□□□ -0.65
TNFRSF1B-202ENST00000489921 DDTP30046 118 aa10.96□□□□□ -0.65
TNFRSF1B-202ENST00000489921 C4orf48Q5BLP8 95 aa10.96□□□□□ -0.65
TNFRSF1B-202ENST00000489921 PMCHL2Q9BQD1 86 aa10.96□□□□□ -0.65
TNFRSF1B-202ENST00000489921 KRTAP13-3Q3SY46 172 aa10.95□□□□□ -0.66
TNFRSF1B-202ENST00000489921 EIF4EBP3O60516 100 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF1B-202ENST00000489921 DPM2O94777 84 aa10.94□□□□□ -0.66
TNFRSF1B-202ENST00000489921 SPINK1P00995 79 aa10.94□□□□□ -0.66
TNFRSF1B-202ENST00000489921 FABP4P15090 132 aa10.94□□□□□ -0.66
TNFRSF1B-202ENST00000489921 GAGE2AQ6NT46 116 aa10.94□□□□□ -0.66
TNFRSF1B-202ENST00000489921 IGLV6-57P01721 117 aa10.93□□□□□ -0.66
TNFRSF1B-202ENST00000489921 KRTAP9-2Q9BYQ4 174 aa10.93□□□□□ -0.66
TNFRSF1B-202ENST00000489921 COLCA2A8K830 154 aa10.92□□□□□ -0.66
TNFRSF1B-202ENST00000489921 IGKCP01834 107 aa10.92□□□□□ -0.66
TNFRSF1B-202ENST00000489921 NMUP48645 174 aa10.92□□□□□ -0.66
TNFRSF1B-202ENST00000489921 SOSTDC1Q6X4U4 206 aa10.92□□□□□ -0.66
TNFRSF1B-202ENST00000489921 Q6ZRX8 168 aa10.92□□□□□ -0.66
TNFRSF1B-202ENST00000489921 HSPB8Q9UJY1 196 aa10.92□□□□□ -0.66
TNFRSF1B-202ENST00000489921 NDUFC2O95298 119 aa10.91□□□□□ -0.66
TNFRSF1B-202ENST00000489921 ADAMTSL4-AS1Q5T5F5 129 aa10.91□□□□□ -0.66
TNFRSF1B-202ENST00000489921 SPANXB1Q9NS25 103 aaPredicted RBP10.91□□□□□ -0.66
TNFRSF1B-202ENST00000489921 S100A12P80511 92 aa10.9□□□□□ -0.66
TNFRSF1B-202ENST00000489921 MOBPQ13875 183 aa10.9□□□□□ -0.66
TNFRSF1B-202ENST00000489921 IGLV9-49A0A0B4J1Y8 123 aa10.89□□□□□ -0.67
TNFRSF1B-202ENST00000489921 LGALS3P17931 250 aaKnown RBP10.89□□□□□ -0.67
TNFRSF1B-202ENST00000489921 HERVK_113P61574 105 aa10.89□□□□□ -0.67
TNFRSF1B-202ENST00000489921 A0A0J9YXY3 114 aa10.88□□□□□ -0.67
TNFRSF1B-202ENST00000489921 SSBP3-AS1Q7Z2R9 100 aa10.88□□□□□ -0.67
TNFRSF1B-202ENST00000489921 Q8N377 158 aa10.88□□□□□ -0.67
TNFRSF1B-202ENST00000489921 SLC7A5P1Q8MH63 180 aa10.87□□□□□ -0.67
TNFRSF1B-202ENST00000489921 RPS29P62273 56 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms