RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 CDKN2A-AS1Q9UH64 79 aa4.27□□□□□ -1.73
COL9A1-209ENST00000489861 IGLV5-45A0A087WSX0 123 aa4.26□□□□□ -1.73
COL9A1-209ENST00000489861 SNAPINO95295 136 aa4.26□□□□□ -1.73
COL9A1-209ENST00000489861 C10orf91Q5T1B1 145 aa4.26□□□□□ -1.73
COL9A1-209ENST00000489861 MRPL55Q7Z7F7 128 aaKnown RBP4.26□□□□□ -1.73
COL9A1-209ENST00000489861 SVBPQ8N300 66 aa4.26□□□□□ -1.73
COL9A1-209ENST00000489861 NKAPP1Q8N9T2 125 aa4.26□□□□□ -1.73
COL9A1-209ENST00000489861 CST9LQ9H4G1 147 aa4.26□□□□□ -1.73
COL9A1-209ENST00000489861 TRAPPC1Q9Y5R8 145 aa4.26□□□□□ -1.73
COL9A1-209ENST00000489861 FAM168BA1KXE4 195 aa4.25□□□□□ -1.73
COL9A1-209ENST00000489861 SMIM1B2RUZ4 78 aa4.25□□□□□ -1.73
COL9A1-209ENST00000489861 HBDP02042 147 aa4.25□□□□□ -1.73
COL9A1-209ENST00000489861 LINC00614P0C842 121 aa4.25□□□□□ -1.73
COL9A1-209ENST00000489861 BCE1O60756 84 aa4.24□□□□□ -1.73
COL9A1-209ENST00000489861 NDUFA6P56556 154 aa4.24□□□□□ -1.73
COL9A1-209ENST00000489861 RPL24P83731 157 aaKnown RBP4.24□□□□□ -1.73
COL9A1-209ENST00000489861 IFITM2Q01629 132 aa4.24□□□□□ -1.73
COL9A1-209ENST00000489861 COX17Q14061 63 aa4.24□□□□□ -1.73
COL9A1-209ENST00000489861 C9orf129Q5T035 196 aaKnown RBP4.24□□□□□ -1.73
COL9A1-209ENST00000489861 ZC2HC1BQ5TFG8 222 aa4.24□□□□□ -1.73
COL9A1-209ENST00000489861 TYMSOSQ8TAI1 123 aa4.24□□□□□ -1.73
COL9A1-209ENST00000489861 C22orf24Q9Y442 160 aa4.24□□□□□ -1.73
COL9A1-209ENST00000489861 LINC00587B1AMM8 73 aa4.23□□□□□ -1.73
COL9A1-209ENST00000489861 IGLC3P0DOY3 106 aa4.23□□□□□ -1.73
COL9A1-209ENST00000489861 UBE2AP49459 152 aa4.23□□□□□ -1.73
COL9A1-209ENST00000489861 ASB16-AS1Q495Z4 193 aa4.23□□□□□ -1.73
COL9A1-209ENST00000489861 IGLV7-46A0A075B6I9 117 aa4.22□□□□□ -1.73
COL9A1-209ENST00000489861 IGLV5-37A0A075B6J1 123 aa4.22□□□□□ -1.73
COL9A1-209ENST00000489861 APOC3P02656 99 aa4.22□□□□□ -1.73
COL9A1-209ENST00000489861 SPINK8P0C7L1 97 aa4.22□□□□□ -1.73
COL9A1-209ENST00000489861 CHCHD1Q96BP2 118 aaKnown RBP4.22□□□□□ -1.73
COL9A1-209ENST00000489861 XAGE1AQ9HD64 81 aa4.22□□□□□ -1.73
COL9A1-209ENST00000489861 IGKV2D-26A0A0A0MRZ7 120 aa4.21□□□□□ -1.74
COL9A1-209ENST00000489861 ATP6V1G1O75348 118 aa4.21□□□□□ -1.74
COL9A1-209ENST00000489861 FAM229BQ4G0N7 80 aa4.21□□□□□ -1.74
COL9A1-209ENST00000489861 TMEM170BQ5T4T1 132 aa4.21□□□□□ -1.74
COL9A1-209ENST00000489861 KRTAP11-1Q8IUC1 163 aa4.21□□□□□ -1.74
COL9A1-209ENST00000489861 C18orf32Q8TCD1 76 aa4.21□□□□□ -1.74
COL9A1-209ENST00000489861 IGLV5-39A0A0G2JS06 123 aa4.2□□□□□ -1.74
COL9A1-209ENST00000489861 S100A12P80511 92 aa4.2□□□□□ -1.74
COL9A1-209ENST00000489861 BAGE3Q86Y29 109 aa4.2□□□□□ -1.74
COL9A1-209ENST00000489861 ERG28Q9UKR5 140 aa4.2□□□□□ -1.74
COL9A1-209ENST00000489861 FLGP20930 4061 aaPredicted RBP4.19□□□□□ -1.74
COL9A1-209ENST00000489861 TRAV12-1A0A0B4J245 112 aa4.19□□□□□ -1.74
COL9A1-209ENST00000489861 ZNF22P17026 224 aaPredicted RBP4.19□□□□□ -1.74
COL9A1-209ENST00000489861 PFN2P35080 140 aa4.19□□□□□ -1.74
COL9A1-209ENST00000489861 HERV-K104P63124 156 aa4.19□□□□□ -1.74
COL9A1-209ENST00000489861 KRTAP7-1Q8IUC3 87 aa4.19□□□□□ -1.74
COL9A1-209ENST00000489861 LINC00167Q96N53 147 aa4.19□□□□□ -1.74
COL9A1-209ENST00000489861 MAP1LC3CQ9BXW4 147 aa4.19□□□□□ -1.74
COL9A1-209ENST00000489861 CHTOPQ9Y3Y2 248 aaKnown RBP4.19□□□□□ -1.74
COL9A1-209ENST00000489861 ZNF706Q9Y5V0 76 aaPredicted RBP4.19□□□□□ -1.74
COL9A1-209ENST00000489861 HSBP1O75506 76 aa4.18□□□□□ -1.74
COL9A1-209ENST00000489861 SPAG11AQ6PDA7 123 aa4.18□□□□□ -1.74
COL9A1-209ENST00000489861 LINC00304Q8N9R0 145 aa4.18□□□□□ -1.74
COL9A1-209ENST00000489861 IFI27L1Q96BM0 104 aa4.18□□□□□ -1.74
COL9A1-209ENST00000489861 A0A087X002 238 aa4.17□□□□□ -1.74
COL9A1-209ENST00000489861 RPL37AP8A6NKH3 93 aa4.17□□□□□ -1.74
COL9A1-209ENST00000489861 LINC00158P58513 81 aa4.17□□□□□ -1.74
COL9A1-209ENST00000489861 LCE5AQ5TCM9 118 aa4.17□□□□□ -1.74
COL9A1-209ENST00000489861 PPDPFQ9H3Y8 114 aa4.17□□□□□ -1.74
COL9A1-209ENST00000489861 SND1-IT1Q9HBX3 110 aa4.17□□□□□ -1.74
COL9A1-209ENST00000489861 A0A096LNJ9 63 aa4.16□□□□□ -1.74
COL9A1-209ENST00000489861 GAGE10A6NGK3 116 aa4.16□□□□□ -1.74
COL9A1-209ENST00000489861 C11orf86A6NJI1 115 aa4.16□□□□□ -1.74
COL9A1-209ENST00000489861 HERVK_113P61574 105 aa4.16□□□□□ -1.74
COL9A1-209ENST00000489861 PMCHL1Q16048 86 aa4.16□□□□□ -1.74
COL9A1-209ENST00000489861 FAM19A1Q7Z5A9 133 aa4.16□□□□□ -1.74
COL9A1-209ENST00000489861 HSPB8Q9UJY1 196 aa4.16□□□□□ -1.74
COL9A1-209ENST00000489861 NEBP20929 6669 aa4.16□□□□□ -1.74
COL9A1-209ENST00000489861 IGKV2-28A0A075B6P5 120 aa4.15□□□□□ -1.75
COL9A1-209ENST00000489861 MYMXA0A1B0GTQ4 84 aa4.15□□□□□ -1.75
COL9A1-209ENST00000489861 TMEM223A0PJW6 202 aa4.15□□□□□ -1.75
COL9A1-209ENST00000489861 M0R378 163 aa4.15□□□□□ -1.75
COL9A1-209ENST00000489861 IGKV2D-28P01615 120 aa4.15□□□□□ -1.75
COL9A1-209ENST00000489861 VPREB1P12018 145 aa4.15□□□□□ -1.75
COL9A1-209ENST00000489861 PLNP26678 52 aa4.15□□□□□ -1.75
COL9A1-209ENST00000489861 MEIG1Q5JSS6 88 aa4.15□□□□□ -1.75
COL9A1-209ENST00000489861 KRTAP5-3Q6L8H2 238 aa4.15□□□□□ -1.75
COL9A1-209ENST00000489861 URB1-AS1Q96HZ7 61 aa4.15□□□□□ -1.75
COL9A1-209ENST00000489861 NDUFA12Q9UI09 145 aa4.15□□□□□ -1.75
COL9A1-209ENST00000489861 CBY1Q9Y3M2 126 aa4.15□□□□□ -1.75
COL9A1-209ENST00000489861 KRTAP4-16G5E9R7 235 aaPredicted RBP4.14□□□□□ -1.75
COL9A1-209ENST00000489861 LEPROTL1O95214 131 aa4.14□□□□□ -1.75
COL9A1-209ENST00000489861 FP248Q71RG6 208 aaPredicted RBP4.14□□□□□ -1.75
COL9A1-209ENST00000489861 CBLN2Q8IUK8 224 aa4.14□□□□□ -1.75
COL9A1-209ENST00000489861 PLEKHB2Q96CS7 222 aa4.14□□□□□ -1.75
COL9A1-209ENST00000489861 ZNF625Q96I27 306 aaPredicted RBP4.14□□□□□ -1.75
COL9A1-209ENST00000489861 TMEM126AQ9H061 195 aa4.14□□□□□ -1.75
COL9A1-209ENST00000489861 PRYO14603 147 aa4.13□□□□□ -1.75
COL9A1-209ENST00000489861 NMUP48645 174 aa4.13□□□□□ -1.75
COL9A1-209ENST00000489861 KRTAP13-1Q8IUC0 172 aa4.13□□□□□ -1.75
COL9A1-209ENST00000489861 FAM19A2Q8N3H0 131 aa4.13□□□□□ -1.75
COL9A1-209ENST00000489861 MIEN1Q9BRT3 115 aa4.13□□□□□ -1.75
COL9A1-209ENST00000489861 SEC61BP60468 96 aaKnown RBP4.12□□□□□ -1.75
COL9A1-209ENST00000489861 KRTAP13-3Q3SY46 172 aa4.12□□□□□ -1.75
COL9A1-209ENST00000489861 YPEL4Q96NS1 127 aa4.12□□□□□ -1.75
COL9A1-209ENST00000489861 HIGD2AQ9BW72 106 aa4.12□□□□□ -1.75
COL9A1-209ENST00000489861 H0Y8G0 127 aa4.11□□□□□ -1.75
COL9A1-209ENST00000489861 M0R2T5 61 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms