RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 LINC00158P58513 81 aa11.58□□□□□ -0.56
EPHB4-207ENST00000489808 ZNF861PO60384 105 aa11.57□□□□□ -0.56
EPHB4-207ENST00000489808 PLNP26678 52 aa11.57□□□□□ -0.56
EPHB4-207ENST00000489808 DPM2O94777 84 aa11.56□□□□□ -0.56
EPHB4-207ENST00000489808 VPREB1P12018 145 aa11.56□□□□□ -0.56
EPHB4-207ENST00000489808 RPL24P83731 157 aaKnown RBP11.56□□□□□ -0.56
EPHB4-207ENST00000489808 PMCHL2Q9BQD1 86 aa11.56□□□□□ -0.56
EPHB4-207ENST00000489808 MAP1LC3CQ9BXW4 147 aa11.56□□□□□ -0.56
EPHB4-207ENST00000489808 A0A0U1RRA0 63 aa11.55□□□□□ -0.56
EPHB4-207ENST00000489808 HERV-K104P63124 156 aa11.55□□□□□ -0.56
EPHB4-207ENST00000489808 NDUFA12Q9UI09 145 aa11.55□□□□□ -0.56
EPHB4-207ENST00000489808 LEPROTO15243 131 aa11.54□□□□□ -0.56
EPHB4-207ENST00000489808 BCE1O60756 84 aa11.54□□□□□ -0.56
EPHB4-207ENST00000489808 IGKCP01834 107 aa11.54□□□□□ -0.56
EPHB4-207ENST00000489808 SMIM13P0DJ93 91 aa11.53□□□□□ -0.56
EPHB4-207ENST00000489808 Q8NDZ9 215 aa11.53□□□□□ -0.56
EPHB4-207ENST00000489808 MYMXA0A1B0GTQ4 84 aa11.52□□□□□ -0.57
EPHB4-207ENST00000489808 LINC00587B1AMM8 73 aa11.52□□□□□ -0.57
EPHB4-207ENST00000489808 MEIG1Q5JSS6 88 aa11.52□□□□□ -0.57
EPHB4-207ENST00000489808 PLEKHB2Q96CS7 222 aa11.52□□□□□ -0.57
EPHB4-207ENST00000489808 IGLV1-50A0A075B6I6 118 aa11.51□□□□□ -0.57
EPHB4-207ENST00000489808 ATP6V1G1O75348 118 aa11.51□□□□□ -0.57
EPHB4-207ENST00000489808 TSPEAR-AS2P59090 65 aa11.51□□□□□ -0.57
EPHB4-207ENST00000489808 IGKV2-28A0A075B6P5 120 aa11.5□□□□□ -0.57
EPHB4-207ENST00000489808 SYS1-DBNDD2H3BUS1 97 aa11.5□□□□□ -0.57
EPHB4-207ENST00000489808 IGKV2D-28P01615 120 aa11.5□□□□□ -0.57
EPHB4-207ENST00000489808 KRTAP1-4P0C5Y4 121 aa11.5□□□□□ -0.57
EPHB4-207ENST00000489808 RPL28P46779 137 aaKnown RBP11.5□□□□□ -0.57
EPHB4-207ENST00000489808 HERVK_113P61574 105 aa11.5□□□□□ -0.57
EPHB4-207ENST00000489808 PRR26Q8N8Z3 221 aa11.5□□□□□ -0.57
EPHB4-207ENST00000489808 J3QQQ9 107 aa11.49□□□□□ -0.57
EPHB4-207ENST00000489808 MIR7-3HGQ8N6C7 128 aa11.49□□□□□ -0.57
EPHB4-207ENST00000489808 COA6Q5JTJ3 125 aaKnown RBP11.48□□□□□ -0.57
EPHB4-207ENST00000489808 NMUP48645 174 aa11.46□□□□□ -0.57
EPHB4-207ENST00000489808 M0R378 163 aa11.45□□□□□ -0.58
EPHB4-207ENST00000489808 LGALS3P17931 250 aaKnown RBP11.45□□□□□ -0.58
EPHB4-207ENST00000489808 PET117Q6UWS5 81 aa11.45□□□□□ -0.58
EPHB4-207ENST00000489808 KRTAP13-1Q8IUC0 172 aa11.45□□□□□ -0.58
EPHB4-207ENST00000489808 BOD1L2Q8IYS8 172 aa11.45□□□□□ -0.58
EPHB4-207ENST00000489808 TMEM238C9JI98 176 aa11.44□□□□□ -0.58
EPHB4-207ENST00000489808 UBE2AP49459 152 aa11.44□□□□□ -0.58
EPHB4-207ENST00000489808 E9PLD3 99 aa11.43□□□□□ -0.58
EPHB4-207ENST00000489808 LINC01545Q5VT33 79 aa11.43□□□□□ -0.58
EPHB4-207ENST00000489808 TMEM126AQ9H061 195 aa11.43□□□□□ -0.58
EPHB4-207ENST00000489808 LOC107984156A0A0G2JMH3 177 aa11.41□□□□□ -0.58
EPHB4-207ENST00000489808 S100A1P23297 94 aa11.41□□□□□ -0.58
EPHB4-207ENST00000489808 ARL17AQ8IVW1 177 aa11.41□□□□□ -0.58
EPHB4-207ENST00000489808 C3orf79P0CE67 100 aa11.4□□□□□ -0.58
EPHB4-207ENST00000489808 DAND5Q8N907 189 aa11.4□□□□□ -0.58
EPHB4-207ENST00000489808 RPL13AP40429 203 aaKnown RBP11.39□□□□□ -0.59
EPHB4-207ENST00000489808 FAM19A1Q7Z5A9 133 aa11.39□□□□□ -0.59
EPHB4-207ENST00000489808 IGKV2D-26A0A0A0MRZ7 120 aa11.38□□□□□ -0.59
EPHB4-207ENST00000489808 PRLHP81277 87 aa11.38□□□□□ -0.59
EPHB4-207ENST00000489808 A0A0J9YXY3 114 aa11.37□□□□□ -0.59
EPHB4-207ENST00000489808 NCR3O14931 201 aa11.37□□□□□ -0.59
EPHB4-207ENST00000489808 KRTDAPP60985 99 aa11.37□□□□□ -0.59
EPHB4-207ENST00000489808 ADAMTSL4-AS1Q5T5F5 129 aa11.34□□□□□ -0.59
EPHB4-207ENST00000489808 KCNQ1DNQ9H478 68 aa11.34□□□□□ -0.59
EPHB4-207ENST00000489808 ANAPC11Q9NYG5 84 aa11.34□□□□□ -0.59
EPHB4-207ENST00000489808 CRYGAP11844 174 aa11.33□□□□□ -0.6
EPHB4-207ENST00000489808 UBR4Q5T4S7 5183 aa11.33□□□□□ -0.6
EPHB4-207ENST00000489808 A0A087X002 238 aa11.32□□□□□ -0.6
EPHB4-207ENST00000489808 TRBV10-3A0A0K0K1G6 114 aa11.32□□□□□ -0.6
EPHB4-207ENST00000489808 PRYO14603 147 aa11.32□□□□□ -0.6
EPHB4-207ENST00000489808 MIEN1Q9BRT3 115 aa11.32□□□□□ -0.6
EPHB4-207ENST00000489808 TRBV10-2A0A0K0K1G8 114 aa11.31□□□□□ -0.6
EPHB4-207ENST00000489808 SPRR1AP35321 89 aa11.31□□□□□ -0.6
EPHB4-207ENST00000489808 NDUFC2O95298 119 aa11.3□□□□□ -0.6
EPHB4-207ENST00000489808 SOSTDC1Q6X4U4 206 aa11.3□□□□□ -0.6
EPHB4-207ENST00000489808 C20orf202A1L168 122 aa11.29□□□□□ -0.6
EPHB4-207ENST00000489808 EIF4EBP3O60516 100 aaPredicted RBP11.29□□□□□ -0.6
EPHB4-207ENST00000489808 LINC00337Q8N6G1 96 aa11.29□□□□□ -0.6
EPHB4-207ENST00000489808 SPANXB1Q9NS25 103 aaPredicted RBP11.29□□□□□ -0.6
EPHB4-207ENST00000489808 LRP2P98164 4655 aa11.29□□□□□ -0.6
EPHB4-207ENST00000489808 ZNF815PA8K554 130 aa11.28□□□□□ -0.6
EPHB4-207ENST00000489808 KRTAP4-16G5E9R7 235 aaPredicted RBP11.28□□□□□ -0.6
EPHB4-207ENST00000489808 TIMM17BO60830 172 aa11.28□□□□□ -0.6
EPHB4-207ENST00000489808 DDTP30046 118 aa11.28□□□□□ -0.6
EPHB4-207ENST00000489808 NPC2P61916 151 aa11.28□□□□□ -0.6
EPHB4-207ENST00000489808 FAM229BQ4G0N7 80 aa11.28□□□□□ -0.6
EPHB4-207ENST00000489808 LITAFQ99732 161 aa11.28□□□□□ -0.6
EPHB4-207ENST00000489808 HIGD2AQ9BW72 106 aa11.28□□□□□ -0.6
EPHB4-207ENST00000489808 S100A12P80511 92 aa11.27□□□□□ -0.61
EPHB4-207ENST00000489808 TYMSOSQ8TAI1 123 aa11.27□□□□□ -0.61
EPHB4-207ENST00000489808 TTTY13Q9BZ97 58 aa11.27□□□□□ -0.61
EPHB4-207ENST00000489808 KRTAP13-2Q52LG2 175 aa11.26□□□□□ -0.61
EPHB4-207ENST00000489808 ETDCA0A1B0GVM5 59 aa11.25□□□□□ -0.61
EPHB4-207ENST00000489808 HIST3H2BBQ8N257 126 aa11.25□□□□□ -0.61
EPHB4-207ENST00000489808 IGLV6-57P01721 117 aa11.24□□□□□ -0.61
EPHB4-207ENST00000489808 AKR1D1P51857 326 aa11.24□□□□□ -0.61
EPHB4-207ENST00000489808 ATOH7Q8N100 152 aa11.24□□□□□ -0.61
EPHB4-207ENST00000489808 LINC00308Q8TCZ7 52 aa11.24□□□□□ -0.61
EPHB4-207ENST00000489808 ANKRD39Q53RE8 183 aa11.23□□□□□ -0.61
EPHB4-207ENST00000489808 S100A7L2Q5SY68 101 aa11.23□□□□□ -0.61
EPHB4-207ENST00000489808 SMCR5Q8TEV8 140 aa11.22□□□□□ -0.61
EPHB4-207ENST00000489808 HIST1H2BLQ99880 126 aa11.22□□□□□ -0.61
EPHB4-207ENST00000489808 B5MCH6 92 aa11.21□□□□□ -0.61
EPHB4-207ENST00000489808 S100A2P29034 98 aa11.21□□□□□ -0.61
EPHB4-207ENST00000489808 SPRR4Q96PI1 79 aa11.21□□□□□ -0.61
EPHB4-207ENST00000489808 TSPAN13O95857 204 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms