RNA–Protein interactions for RNA: ENST00000489638.5

LTA-216, Transcript of lymphotoxin alpha, humanhuman

TSL 5

Gene LTA, Length 1,377 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-216ENST00000489638 C4orf48Q5BLP8 95 aa7.33□□□□□ -1.24
LTA-216ENST00000489638 LINC00337Q8N6G1 96 aa7.33□□□□□ -1.24
LTA-216ENST00000489638 SMCO4Q9NRQ5 59 aa7.33□□□□□ -1.24
LTA-216ENST00000489638 TRAV9-1A0A075B6T8 112 aa7.32□□□□□ -1.24
LTA-216ENST00000489638 NDUFA6P56556 154 aa7.31□□□□□ -1.24
LTA-216ENST00000489638 DAND5Q8N907 189 aa7.31□□□□□ -1.24
LTA-216ENST00000489638 Q8NBF4 154 aa7.31□□□□□ -1.24
LTA-216ENST00000489638 ZNF706Q9Y5V0 76 aaPredicted RBP7.31□□□□□ -1.24
LTA-216ENST00000489638 SFTA2Q6UW10 78 aa7.29□□□□□ -1.24
LTA-216ENST00000489638 CRCT1Q9UGL9 99 aa7.29□□□□□ -1.24
LTA-216ENST00000489638 A0A096LNJ9 63 aa7.28□□□□□ -1.24
LTA-216ENST00000489638 C11orf86A6NJI1 115 aa7.27□□□□□ -1.25
LTA-216ENST00000489638 S100PP25815 95 aa7.27□□□□□ -1.25
LTA-216ENST00000489638 LINC00158P58513 81 aa7.27□□□□□ -1.25
LTA-216ENST00000489638 SEC61BP60468 96 aaKnown RBP7.27□□□□□ -1.25
LTA-216ENST00000489638 PRYO14603 147 aa7.26□□□□□ -1.25
LTA-216ENST00000489638 FABP9Q0Z7S8 132 aa7.26□□□□□ -1.25
LTA-216ENST00000489638 TMEM170BQ5T4T1 132 aa7.26□□□□□ -1.25
LTA-216ENST00000489638 A0A0U1RRA0 63 aa7.25□□□□□ -1.25
LTA-216ENST00000489638 SPINK1P00995 79 aa7.25□□□□□ -1.25
LTA-216ENST00000489638 HBDP02042 147 aa7.24□□□□□ -1.25
LTA-216ENST00000489638 COX19Q49B96 90 aa7.24□□□□□ -1.25
LTA-216ENST00000489638 SMCR5Q8TEV8 140 aa7.24□□□□□ -1.25
LTA-216ENST00000489638 NCR3O14931 201 aa7.23□□□□□ -1.25
LTA-216ENST00000489638 SPRR1AP35321 89 aa7.23□□□□□ -1.25
LTA-216ENST00000489638 PMCHL1Q16048 86 aa7.23□□□□□ -1.25
LTA-216ENST00000489638 BAGE3Q86Y29 109 aa7.23□□□□□ -1.25
LTA-216ENST00000489638 BOD1L2Q8IYS8 172 aa7.23□□□□□ -1.25
LTA-216ENST00000489638 URB1-AS1Q96HZ7 61 aa7.23□□□□□ -1.25
LTA-216ENST00000489638 NDUFA12Q9UI09 145 aa7.23□□□□□ -1.25
LTA-216ENST00000489638 ETDCA0A1B0GVM5 59 aa7.22□□□□□ -1.25
LTA-216ENST00000489638 TMEM218A2RU14 115 aa7.22□□□□□ -1.25
LTA-216ENST00000489638 LINC00483Q53H64 154 aa7.22□□□□□ -1.25
LTA-216ENST00000489638 KRTAP4-16G5E9R7 235 aaPredicted RBP7.21□□□□□ -1.25
LTA-216ENST00000489638 MOBPQ13875 183 aa7.21□□□□□ -1.25
LTA-216ENST00000489638 CLLU1Q5K131 121 aa7.21□□□□□ -1.25
LTA-216ENST00000489638 LCE2CQ5TA81 110 aa7.21□□□□□ -1.25
LTA-216ENST00000489638 C18orf32Q8TCD1 76 aa7.21□□□□□ -1.25
LTA-216ENST00000489638 KCNQ1DNQ9H478 68 aa7.21□□□□□ -1.25
LTA-216ENST00000489638 LINC00614P0C842 121 aa7.2□□□□□ -1.26
LTA-216ENST00000489638 SMIM13P0DJ93 91 aa7.2□□□□□ -1.26
LTA-216ENST00000489638 XP32Q5T750 250 aa7.2□□□□□ -1.26
LTA-216ENST00000489638 GAGE2AQ6NT46 116 aa7.2□□□□□ -1.26
LTA-216ENST00000489638 UQCC3Q6UW78 93 aa7.2□□□□□ -1.26
LTA-216ENST00000489638 Q8N377 158 aa7.2□□□□□ -1.26
LTA-216ENST00000489638 FAM19A2Q8N3H0 131 aa7.2□□□□□ -1.26
LTA-216ENST00000489638 SEC11CQ9BY50 192 aa7.2□□□□□ -1.26
LTA-216ENST00000489638 IGLV9-49A0A0B4J1Y8 123 aa7.2□□□□□ -1.26
LTA-216ENST00000489638 ATP6V1G1O75348 118 aa7.2□□□□□ -1.26
LTA-216ENST00000489638 RPS29P62273 56 aaKnown RBP7.2□□□□□ -1.26
LTA-216ENST00000489638 MEIG1Q5JSS6 88 aa7.2□□□□□ -1.26
LTA-216ENST00000489638 MIR7-3HGQ8N6C7 128 aa7.2□□□□□ -1.26
LTA-216ENST00000489638 CHTOPQ9Y3Y2 248 aaKnown RBP7.2□□□□□ -1.26
LTA-216ENST00000489638 TRBV10-3A0A0K0K1G6 114 aa7.19□□□□□ -1.26
LTA-216ENST00000489638 TMEM223A0PJW6 202 aa7.19□□□□□ -1.26
LTA-216ENST00000489638 KRTAP19-2Q3LHN2 52 aa7.18□□□□□ -1.26
LTA-216ENST00000489638 SLC25A20O43772 301 aa7.17□□□□□ -1.26
LTA-216ENST00000489638 ERC2-IT1O76042 136 aa7.17□□□□□ -1.26
LTA-216ENST00000489638 B5MCH6 92 aa7.16□□□□□ -1.26
LTA-216ENST00000489638 S100A12P80511 92 aa7.16□□□□□ -1.26
LTA-216ENST00000489638 SSBP3-AS1Q7Z2R9 100 aa7.16□□□□□ -1.26
LTA-216ENST00000489638 TRAPPC1Q9Y5R8 145 aa7.16□□□□□ -1.26
LTA-216ENST00000489638 HERV-K104P63124 156 aa7.15□□□□□ -1.26
LTA-216ENST00000489638 MT1HP80294 61 aa7.14□□□□□ -1.27
LTA-216ENST00000489638 RHEBQ15382 184 aa7.14□□□□□ -1.27
LTA-216ENST00000489638 Q9BRP9 147 aa7.14□□□□□ -1.27
LTA-216ENST00000489638 RPS10P5Q9NQ39 176 aa7.14□□□□□ -1.27
LTA-216ENST00000489638 TRAV12-1A0A0B4J245 112 aa7.13□□□□□ -1.27
LTA-216ENST00000489638 LINC00587B1AMM8 73 aa7.12□□□□□ -1.27
LTA-216ENST00000489638 DDTP30046 118 aa7.12□□□□□ -1.27
LTA-216ENST00000489638 C9orf153Q5TBE3 101 aa7.12□□□□□ -1.27
LTA-216ENST00000489638 Q6ZRX8 168 aa7.12□□□□□ -1.27
LTA-216ENST00000489638 IFI27L1Q96BM0 104 aa7.12□□□□□ -1.27
LTA-216ENST00000489638 MAP1LC3CQ9BXW4 147 aa7.12□□□□□ -1.27
LTA-216ENST00000489638 MYMXA0A1B0GTQ4 84 aa7.1□□□□□ -1.27
LTA-216ENST00000489638 IFITM2Q01629 132 aa7.1□□□□□ -1.27
LTA-216ENST00000489638 TRBV10-2A0A0K0K1G8 114 aa7.09□□□□□ -1.27
LTA-216ENST00000489638 C10orf91Q5T1B1 145 aa7.09□□□□□ -1.27
LTA-216ENST00000489638 COMMD7Q86VX2 200 aa7.09□□□□□ -1.27
LTA-216ENST00000489638 CFC1BP0CG36 223 aa7.08□□□□□ -1.28
LTA-216ENST00000489638 SPANXB1Q9NS25 103 aaPredicted RBP7.08□□□□□ -1.28
LTA-216ENST00000489638 LOC107984156A0A0G2JMH3 177 aa7.08□□□□□ -1.28
LTA-216ENST00000489638 TSPEAR-AS2P59090 65 aa7.08□□□□□ -1.28
LTA-216ENST00000489638 ARL17AQ8IVW1 177 aa7.08□□□□□ -1.28
LTA-216ENST00000489638 LORP23490 312 aaPredicted RBP7.07□□□□□ -1.28
LTA-216ENST00000489638 PCOTHQ58A44 107 aa7.07□□□□□ -1.28
LTA-216ENST00000489638 CHCHD1Q96BP2 118 aaKnown RBP7.07□□□□□ -1.28
LTA-216ENST00000489638 IGLV8-61A0A075B6I0 122 aa7.06□□□□□ -1.28
LTA-216ENST00000489638 JOSD1Q15040 202 aaPredicted RBP7.06□□□□□ -1.28
LTA-216ENST00000489638 S100A7L2Q5SY68 101 aa7.06□□□□□ -1.28
LTA-216ENST00000489638 MIEN1Q9BRT3 115 aa7.06□□□□□ -1.28
LTA-216ENST00000489638 TRAV23DV6A0A075B6W5 121 aa7.05□□□□□ -1.28
LTA-216ENST00000489638 H0Y8G0 127 aa7.05□□□□□ -1.28
LTA-216ENST00000489638 IGLV6-57P01721 117 aa7.05□□□□□ -1.28
LTA-216ENST00000489638 ST20-AS1Q8NBB2 130 aa7.05□□□□□ -1.28
LTA-216ENST00000489638 LEPROTO15243 131 aa7.04□□□□□ -1.28
LTA-216ENST00000489638 KRTAP10-6P60371 365 aaPredicted RBP7.04□□□□□ -1.28
LTA-216ENST00000489638 C9orf92A6NGG3 77 aa7.03□□□□□ -1.28
LTA-216ENST00000489638 NDUFC2O95298 119 aa7.03□□□□□ -1.28
LTA-216ENST00000489638 LIMD2Q9BT23 127 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms