RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 RPL13AP40429 203 aaKnown RBP6.51□□□□□ -1.37
USP11-211ENST00000489111 Q6ZRP5 223 aa6.51□□□□□ -1.37
USP11-211ENST00000489111 DNAH1Q9P2D7 4330 aa6.51□□□□□ -1.37
USP11-211ENST00000489111 LYSTQ99698 3801 aa6.51□□□□□ -1.37
USP11-211ENST00000489111 C9orf118A6NHY6 69 aa6.5□□□□□ -1.37
USP11-211ENST00000489111 NDUFC2O95298 119 aa6.5□□□□□ -1.37
USP11-211ENST00000489111 ALMS1Q8TCU4 4167 aa6.5□□□□□ -1.37
USP11-211ENST00000489111 VPS13DQ5THJ4 4388 aa6.5□□□□□ -1.37
USP11-211ENST00000489111 H3BUT2 72 aa6.49□□□□□ -1.37
USP11-211ENST00000489111 NCR3O14931 201 aa6.49□□□□□ -1.37
USP11-211ENST00000489111 TSPAN13O95857 204 aa6.49□□□□□ -1.37
USP11-211ENST00000489111 GAGE2BQ13066 116 aa6.49□□□□□ -1.37
USP11-211ENST00000489111 OR13C6PQ8NH95 151 aa6.49□□□□□ -1.37
USP11-211ENST00000489111 NAA38Q9BRA0 125 aaKnown RBP6.49□□□□□ -1.37
USP11-211ENST00000489111 IGKV2-28A0A075B6P5 120 aa6.48□□□□□ -1.37
USP11-211ENST00000489111 IGKV2D-28P01615 120 aa6.48□□□□□ -1.37
USP11-211ENST00000489111 PSMB2P49721 201 aa6.48□□□□□ -1.37
USP11-211ENST00000489111 A0A1B0GV90 55 aa6.47□□□□□ -1.37
USP11-211ENST00000489111 FABP2P12104 132 aa6.47□□□□□ -1.37
USP11-211ENST00000489111 S100A7L2Q5SY68 101 aa6.47□□□□□ -1.37
USP11-211ENST00000489111 LYRM7Q5U5X0 104 aa6.47□□□□□ -1.37
USP11-211ENST00000489111 LINC00337Q8N6G1 96 aa6.47□□□□□ -1.37
USP11-211ENST00000489111 TRBV10-2A0A0K0K1G8 114 aa6.46□□□□□ -1.38
USP11-211ENST00000489111 A0A1W2PPM0 123 aa6.46□□□□□ -1.38
USP11-211ENST00000489111 C16orf90A8MZG2 172 aa6.46□□□□□ -1.38
USP11-211ENST00000489111 RTL8CO15255 209 aa6.46□□□□□ -1.38
USP11-211ENST00000489111 PRR3P79522 188 aaKnown RBP6.46□□□□□ -1.38
USP11-211ENST00000489111 TNP2Q05952 138 aa6.46□□□□□ -1.38
USP11-211ENST00000489111 VAMP3Q15836 100 aa6.46□□□□□ -1.38
USP11-211ENST00000489111 C9orf129Q5T035 196 aaKnown RBP6.46□□□□□ -1.38
USP11-211ENST00000489111 C9orf163Q8N9P6 203 aa6.46□□□□□ -1.38
USP11-211ENST00000489111 NKAPP1Q8N9T2 125 aa6.46□□□□□ -1.38
USP11-211ENST00000489111 A0A096LNI7 61 aa6.45□□□□□ -1.38
USP11-211ENST00000489111 IGLV5-52A0A0A0MRZ9 124 aa6.45□□□□□ -1.38
USP11-211ENST00000489111 IGKV2-24A0A0C4DH68 120 aa6.45□□□□□ -1.38
USP11-211ENST00000489111 VPREB1P12018 145 aa6.45□□□□□ -1.38
USP11-211ENST00000489111 Q8NDZ9 215 aa6.45□□□□□ -1.38
USP11-211ENST00000489111 M0R378 163 aa6.44□□□□□ -1.38
USP11-211ENST00000489111 COX6CP09669 75 aa6.44□□□□□ -1.38
USP11-211ENST00000489111 SCGB1C2P0DMR2 95 aa6.44□□□□□ -1.38
USP11-211ENST00000489111 TMEM126AQ9H061 195 aa6.44□□□□□ -1.38
USP11-211ENST00000489111 LINC00474Q9P2X8 69 aa6.44□□□□□ -1.38
USP11-211ENST00000489111 PLA2G2DQ9UNK4 145 aa6.44□□□□□ -1.38
USP11-211ENST00000489111 TRIAP1O43715 76 aa6.43□□□□□ -1.38
USP11-211ENST00000489111 LINC01620Q4KN68 170 aa6.43□□□□□ -1.38
USP11-211ENST00000489111 FAM19A5Q7Z5A7 132 aaPredicted RBP6.43□□□□□ -1.38
USP11-211ENST00000489111 SERTAD4-AS1Q5TG53 156 aa6.42□□□□□ -1.38
USP11-211ENST00000489111 SDIM1Q6ZPB5 146 aa6.42□□□□□ -1.38
USP11-211ENST00000489111 GTF2H5Q6ZYL4 71 aa6.42□□□□□ -1.38
USP11-211ENST00000489111 CBY1Q9Y3M2 126 aa6.42□□□□□ -1.38
USP11-211ENST00000489111 SPCS1Q9Y6A9 102 aa6.42□□□□□ -1.38
USP11-211ENST00000489111 IGLV5-37A0A075B6J1 123 aa6.41□□□□□ -1.38
USP11-211ENST00000489111 TRBV10-3A0A0K0K1G6 114 aa6.41□□□□□ -1.38
USP11-211ENST00000489111 FAM168BA1KXE4 195 aa6.41□□□□□ -1.38
USP11-211ENST00000489111 IGLV6-57P01721 117 aa6.41□□□□□ -1.38
USP11-211ENST00000489111 CHTF8P0CG12 524 aa6.41□□□□□ -1.38
USP11-211ENST00000489111 RPL28P46779 137 aaKnown RBP6.41□□□□□ -1.38
USP11-211ENST00000489111 SMIM11BQ8TCY0 68 aa6.41□□□□□ -1.38
USP11-211ENST00000489111 TRAV23DV6A0A075B6W5 121 aa6.4□□□□□ -1.38
USP11-211ENST00000489111 GAGE10A6NGK3 116 aa6.4□□□□□ -1.38
USP11-211ENST00000489111 K7EP34 96 aa6.4□□□□□ -1.38
USP11-211ENST00000489111 M0QXV9 152 aa6.4□□□□□ -1.38
USP11-211ENST00000489111 FUSP35637 526 aaKnown RBP eCLIP6.4□□□□□ -1.38
USP11-211ENST00000489111 LINC00336Q6ZUF6 198 aa6.4□□□□□ -1.38
USP11-211ENST00000489111 DPH3Q96FX2 82 aa6.4□□□□□ -1.38
USP11-211ENST00000489111 DNAH6Q9C0G6 4158 aa6.39□□□□□ -1.39
USP11-211ENST00000489111 TRBV20-1A0A075B6N2 111 aa6.39□□□□□ -1.39
USP11-211ENST00000489111 MRPL55Q7Z7F7 128 aaKnown RBP6.39□□□□□ -1.39
USP11-211ENST00000489111 C7orf33Q8WU49 177 aa6.39□□□□□ -1.39
USP11-211ENST00000489111 C22orf24Q9Y442 160 aa6.39□□□□□ -1.39
USP11-211ENST00000489111 ATXN8Q156A1 80 aa6.38□□□□□ -1.39
USP11-211ENST00000489111 DIRC1Q969H9 104 aa6.38□□□□□ -1.39
USP11-211ENST00000489111 KRTAP10-2P60368 255 aa6.37□□□□□ -1.39
USP11-211ENST00000489111 SPACA4Q8TDM5 124 aa6.37□□□□□ -1.39
USP11-211ENST00000489111 DNAH10Q8IVF4 4471 aa6.37□□□□□ -1.39
USP11-211ENST00000489111 A0A1W2PNN7 141 aa6.36□□□□□ -1.39
USP11-211ENST00000489111 H0YGX0 51 aa6.36□□□□□ -1.39
USP11-211ENST00000489111 ZNF73O43830 326 aaPredicted RBP6.36□□□□□ -1.39
USP11-211ENST00000489111 TCL1BO95988 128 aa6.36□□□□□ -1.39
USP11-211ENST00000489111 UBE2V1Q13404 147 aa6.36□□□□□ -1.39
USP11-211ENST00000489111 C6orf99Q4VX62 202 aa6.36□□□□□ -1.39
USP11-211ENST00000489111 KRTAP7-1Q8IUC3 87 aa6.36□□□□□ -1.39
USP11-211ENST00000489111 CLEC2BQ92478 149 aa6.36□□□□□ -1.39
USP11-211ENST00000489111 LINC00167Q96N53 147 aa6.36□□□□□ -1.39
USP11-211ENST00000489111 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.36□□□□□ -1.39
USP11-211ENST00000489111 KMT2AQ03164 3969 aa6.35□□□□□ -1.39
USP11-211ENST00000489111 RPL37AP8A6NKH3 93 aa6.35□□□□□ -1.39
USP11-211ENST00000489111 PRYO14603 147 aa6.35□□□□□ -1.39
USP11-211ENST00000489111 UBE2BP63146 152 aa6.35□□□□□ -1.39
USP11-211ENST00000489111 IGLV1-50A0A075B6I6 118 aa6.34□□□□□ -1.39
USP11-211ENST00000489111 H3BMG7 143 aa6.34□□□□□ -1.39
USP11-211ENST00000489111 PANO1I0J062 215 aa6.34□□□□□ -1.39
USP11-211ENST00000489111 LST1O00453 97 aa6.34□□□□□ -1.39
USP11-211ENST00000489111 SNCGO76070 127 aa6.34□□□□□ -1.39
USP11-211ENST00000489111 KCNQ1DNQ9H478 68 aa6.34□□□□□ -1.39
USP11-211ENST00000489111 A0A087WYN8 130 aa6.33□□□□□ -1.4
USP11-211ENST00000489111 TRBV7-6A0A0J9YX20 115 aa6.33□□□□□ -1.4
USP11-211ENST00000489111 COX7BP24311 80 aa6.33□□□□□ -1.4
USP11-211ENST00000489111 ETDCA0A1B0GVM5 59 aa6.32□□□□□ -1.4
USP11-211ENST00000489111 DNAL4O96015 105 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms