RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 EIF4EBP3O60516 100 aaPredicted RBP10.24□□□□□ -0.77
CLDN11-208ENST00000488989 GAGE2EQ4V326 116 aa10.24□□□□□ -0.77
CLDN11-208ENST00000488989 C9orf129Q5T035 196 aaKnown RBP10.24□□□□□ -0.77
CLDN11-208ENST00000488989 MUSTN1Q8IVN3 82 aa10.24□□□□□ -0.77
CLDN11-208ENST00000488989 GAGE2DQ9UEU5 116 aa10.24□□□□□ -0.77
CLDN11-208ENST00000488989 CTAG1AP78358 180 aa10.23□□□□□ -0.77
CLDN11-208ENST00000488989 GAGE2BQ13066 116 aa10.23□□□□□ -0.77
CLDN11-208ENST00000488989 XAGE1AQ9HD64 81 aa10.23□□□□□ -0.77
CLDN11-208ENST00000488989 CEND1Q8N111 149 aa10.22□□□□□ -0.77
CLDN11-208ENST00000488989 PLA2G2DQ9UNK4 145 aa10.22□□□□□ -0.77
CLDN11-208ENST00000488989 LRP1BQ9NZR2 4599 aa10.21□□□□□ -0.77
CLDN11-208ENST00000488989 NPC2P61916 151 aa10.21□□□□□ -0.77
CLDN11-208ENST00000488989 LINC00474Q9P2X8 69 aa10.21□□□□□ -0.77
CLDN11-208ENST00000488989 PKHD1P08F94 4074 aa10.21□□□□□ -0.78
CLDN11-208ENST00000488989 NDUFC2O95298 119 aa10.2□□□□□ -0.78
CLDN11-208ENST00000488989 IGKV2-24A0A0C4DH68 120 aa10.19□□□□□ -0.78
CLDN11-208ENST00000488989 CHTF8P0CG12 524 aa10.19□□□□□ -0.78
CLDN11-208ENST00000488989 RPL24P83731 157 aaKnown RBP10.19□□□□□ -0.78
CLDN11-208ENST00000488989 SPACA4Q8TDM5 124 aa10.19□□□□□ -0.78
CLDN11-208ENST00000488989 PANO1I0J062 215 aa10.18□□□□□ -0.78
CLDN11-208ENST00000488989 VPREB1P12018 145 aa10.18□□□□□ -0.78
CLDN11-208ENST00000488989 FXYD2P54710 66 aa10.18□□□□□ -0.78
CLDN11-208ENST00000488989 Q8NDZ9 215 aa10.18□□□□□ -0.78
CLDN11-208ENST00000488989 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.18□□□□□ -0.78
CLDN11-208ENST00000488989 IGLV5-37A0A075B6J1 123 aa10.17□□□□□ -0.78
CLDN11-208ENST00000488989 A4D1N5 150 aa10.17□□□□□ -0.78
CLDN11-208ENST00000488989 EPM2AB3EWF7 344 aa10.17□□□□□ -0.78
CLDN11-208ENST00000488989 KRTAP10-1P60331 282 aa10.17□□□□□ -0.78
CLDN11-208ENST00000488989 BVES-AS1Q5T3Y7 98 aa10.17□□□□□ -0.78
CLDN11-208ENST00000488989 Q6ZSA8 131 aa10.17□□□□□ -0.78
CLDN11-208ENST00000488989 PCP4L1A6NKN8 68 aa10.16□□□□□ -0.78
CLDN11-208ENST00000488989 M0R143 59 aa10.16□□□□□ -0.78
CLDN11-208ENST00000488989 KRTAP7-1Q8IUC3 87 aa10.16□□□□□ -0.78
CLDN11-208ENST00000488989 TMEM238LA0A1B0GVL6 79 aa10.15□□□□□ -0.78
CLDN11-208ENST00000488989 A6NJY4 79 aa10.15□□□□□ -0.78
CLDN11-208ENST00000488989 SERTAD4-AS1Q5TG53 156 aa10.15□□□□□ -0.78
CLDN11-208ENST00000488989 IGKV2-28A0A075B6P5 120 aa10.14□□□□□ -0.79
CLDN11-208ENST00000488989 TRBV10-2A0A0K0K1G8 114 aa10.14□□□□□ -0.79
CLDN11-208ENST00000488989 A0A1W2PNN7 141 aa10.14□□□□□ -0.79
CLDN11-208ENST00000488989 FAM168BA1KXE4 195 aa10.14□□□□□ -0.79
CLDN11-208ENST00000488989 IGKV2D-28P01615 120 aa10.14□□□□□ -0.79
CLDN11-208ENST00000488989 HINT1P49773 126 aaPredicted RBP10.14□□□□□ -0.79
CLDN11-208ENST00000488989 A0A1B0GWB2 263 aa10.12□□□□□ -0.79
CLDN11-208ENST00000488989 CFC1BP0CG36 223 aa10.12□□□□□ -0.79
CLDN11-208ENST00000488989 CFC1P0CG37 223 aa10.12□□□□□ -0.79
CLDN11-208ENST00000488989 PLAC8Q9NZF1 115 aa10.12□□□□□ -0.79
CLDN11-208ENST00000488989 FAM30AQ9NZY2 134 aa10.12□□□□□ -0.79
CLDN11-208ENST00000488989 A0A087WYN8 130 aa10.11□□□□□ -0.79
CLDN11-208ENST00000488989 A0A0B4J2C4 111 aa10.11□□□□□ -0.79
CLDN11-208ENST00000488989 PRR3P79522 188 aaKnown RBP10.11□□□□□ -0.79
CLDN11-208ENST00000488989 M0R378 163 aa10.1□□□□□ -0.79
CLDN11-208ENST00000488989 FAM19A5Q7Z5A7 132 aaPredicted RBP10.1□□□□□ -0.79
CLDN11-208ENST00000488989 C22orf24Q9Y442 160 aa10.1□□□□□ -0.79
CLDN11-208ENST00000488989 NCR3O14931 201 aa10.09□□□□□ -0.79
CLDN11-208ENST00000488989 LINC00337Q8N6G1 96 aa10.09□□□□□ -0.79
CLDN11-208ENST00000488989 NKAPP1Q8N9T2 125 aa10.09□□□□□ -0.79
CLDN11-208ENST00000488989 APOBP04114 4563 aaKnown RBP10.09□□□□□ -0.79
CLDN11-208ENST00000488989 TRAV13-2A0A0B4J235 113 aa10.08□□□□□ -0.8
CLDN11-208ENST00000488989 SNHG12Q9BXW3 62 aa10.08□□□□□ -0.8
CLDN11-208ENST00000488989 NHP2Q9NX24 153 aaKnown RBP10.08□□□□□ -0.8
CLDN11-208ENST00000488989 M0QXV9 152 aa10.07□□□□□ -0.8
CLDN11-208ENST00000488989 MRPL55Q7Z7F7 128 aaKnown RBP10.07□□□□□ -0.8
CLDN11-208ENST00000488989 C7orf33Q8WU49 177 aa10.07□□□□□ -0.8
CLDN11-208ENST00000488989 DPH3Q96FX2 82 aa10.07□□□□□ -0.8
CLDN11-208ENST00000488989 A6NDN8 102 aa10.06□□□□□ -0.8
CLDN11-208ENST00000488989 IGLV6-57P01721 117 aa10.06□□□□□ -0.8
CLDN11-208ENST00000488989 LBHQ53QV2 105 aaPredicted RBP10.05□□□□□ -0.8
CLDN11-208ENST00000488989 CIRBP-AS1Q8TBR5 109 aa10.05□□□□□ -0.8
CLDN11-208ENST00000488989 RAB37Q96AX2 223 aa10.05□□□□□ -0.8
CLDN11-208ENST00000488989 LINC00167Q96N53 147 aa10.05□□□□□ -0.8
CLDN11-208ENST00000488989 TMEM126AQ9H061 195 aa10.05□□□□□ -0.8
CLDN11-208ENST00000488989 BATFQ16520 125 aa10.04□□□□□ -0.8
CLDN11-208ENST00000488989 SCXQ7RTU7 201 aa10.04□□□□□ -0.8
CLDN11-208ENST00000488989 PHF5AQ7RTV0 110 aaKnown RBP10.04□□□□□ -0.8
CLDN11-208ENST00000488989 PRO1854Q9UHT4 67 aa10.04□□□□□ -0.8
CLDN11-208ENST00000488989 TRBV10-3A0A0K0K1G6 114 aa10.03□□□□□ -0.8
CLDN11-208ENST00000488989 K7ERJ3 54 aa10.03□□□□□ -0.8
CLDN11-208ENST00000488989 S100A7L2Q5SY68 101 aa10.03□□□□□ -0.8
CLDN11-208ENST00000488989 IGLV1-50A0A075B6I6 118 aa10.02□□□□□ -0.81
CLDN11-208ENST00000488989 RPL13AP40429 203 aaKnown RBP10.02□□□□□ -0.81
CLDN11-208ENST00000488989 OR13C6PQ8NH95 151 aa10.02□□□□□ -0.81
CLDN11-208ENST00000488989 GAGE10A6NGK3 116 aa10.01□□□□□ -0.81
CLDN11-208ENST00000488989 EPPK1P58107 5090 aaKnown RBP10.01□□□□□ -0.81
CLDN11-208ENST00000488989 XGP55808 180 aa10□□□□□ -0.81
CLDN11-208ENST00000488989 KCNQ1DNQ9H478 68 aa10□□□□□ -0.81
CLDN11-208ENST00000488989 CBY1Q9Y3M2 126 aa10□□□□□ -0.81
CLDN11-208ENST00000488989 RPL37AP8A6NKH3 93 aa9.98□□□□□ -0.81
CLDN11-208ENST00000488989 PRYO14603 147 aa9.98□□□□□ -0.81
CLDN11-208ENST00000488989 KRTAP11-1Q8IUC1 163 aa9.98□□□□□ -0.81
CLDN11-208ENST00000488989 TRAV23DV6A0A075B6W5 121 aa9.97□□□□□ -0.81
CLDN11-208ENST00000488989 SPRR1AP35321 89 aa9.97□□□□□ -0.81
CLDN11-208ENST00000488989 RPL28P46779 137 aaKnown RBP9.97□□□□□ -0.81
CLDN11-208ENST00000488989 SMIM11BQ8TCY0 68 aa9.97□□□□□ -0.81
CLDN11-208ENST00000488989 TSPAN13O95857 204 aa9.96□□□□□ -0.82
CLDN11-208ENST00000488989 UBE2BP63146 152 aa9.96□□□□□ -0.82
CLDN11-208ENST00000488989 HAMPP81172 84 aa9.96□□□□□ -0.82
CLDN11-208ENST00000488989 COL5A1-AS1Q5SY13 56 aa9.96□□□□□ -0.82
CLDN11-208ENST00000488989 TAX1BP3O14907 124 aa9.95□□□□□ -0.82
CLDN11-208ENST00000488989 H7C2G1 150 aa9.94□□□□□ -0.82
CLDN11-208ENST00000488989 RYR1P21817 5038 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms