RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 FAM223AQ8IWN6 122 aa-1.18□□□□□ -2.6
CCDC93-209ENST00000488908 PSENENQ9NZ42 101 aa-1.18□□□□□ -2.6
CCDC93-209ENST00000488908 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.18□□□□□ -2.6
CCDC93-209ENST00000488908 DNAH12Q6ZR08 3092 aa-1.18□□□□□ -2.6
CCDC93-209ENST00000488908 NKTRP30414 1462 aaKnown RBP-1.18□□□□□ -2.6
CCDC93-209ENST00000488908 TULP4Q9NRJ4 1543 aa-1.19□□□□□ -2.6
CCDC93-209ENST00000488908 DOCK2Q92608 1830 aa-1.19□□□□□ -2.6
CCDC93-209ENST00000488908 MT-ATP8P03928 68 aa-1.19□□□□□ -2.6
CCDC93-209ENST00000488908 TSPAN19P0C672 248 aa-1.19□□□□□ -2.6
CCDC93-209ENST00000488908 NBEAP1P0C6P0 100 aa-1.19□□□□□ -2.6
CCDC93-209ENST00000488908 SPART-AS1P0CW21 52 aa-1.19□□□□□ -2.6
CCDC93-209ENST00000488908 GUCA1AP43080 201 aaPredicted RBP-1.19□□□□□ -2.6
CCDC93-209ENST00000488908 LELP1Q5T871 98 aa-1.19□□□□□ -2.6
CCDC93-209ENST00000488908 DEFB106AQ8N104 65 aa-1.19□□□□□ -2.6
CCDC93-209ENST00000488908 GSKIPQ9P0R6 139 aa-1.19□□□□□ -2.6
CCDC93-209ENST00000488908 MYH7P12883 1935 aa-1.19□□□□□ -2.6
CCDC93-209ENST00000488908 TRBV7-3A0A075B6L6 115 aa-1.2□□□□□ -2.6
CCDC93-209ENST00000488908 SPTY2D1-AS1A0A0U1RR47 76 aa-1.2□□□□□ -2.6
CCDC93-209ENST00000488908 A8MTW9 85 aa-1.2□□□□□ -2.6
CCDC93-209ENST00000488908 SNCAP37840 140 aa-1.2□□□□□ -2.6
CCDC93-209ENST00000488908 UBA52P62987 128 aaKnown RBP-1.2□□□□□ -2.6
CCDC93-209ENST00000488908 KCNRGQ8N5I3 272 aa-1.2□□□□□ -2.6
CCDC93-209ENST00000488908 COPZ2Q9P299 210 aa-1.2□□□□□ -2.6
CCDC93-209ENST00000488908 PSME4Q14997 1843 aa-1.2□□□□□ -2.6
CCDC93-209ENST00000488908 RAPGEF6Q8TEU7 1601 aa-1.21□□□□□ -2.6
CCDC93-209ENST00000488908 LCE6AA0A183 80 aa-1.21□□□□□ -2.6
CCDC93-209ENST00000488908 LINC00694P0DN24 101 aa-1.21□□□□□ -2.6
CCDC93-209ENST00000488908 HIST1H1DP16402 221 aaKnown RBP-1.21□□□□□ -2.6
CCDC93-209ENST00000488908 TMEM263Q8WUH6 116 aaKnown RBP-1.21□□□□□ -2.6
CCDC93-209ENST00000488908 LINC01558Q9Y6Z2 57 aa-1.21□□□□□ -2.6
CCDC93-209ENST00000488908 PRDM15P57071 1507 aaPredicted RBP-1.21□□□□□ -2.6
CCDC93-209ENST00000488908 NCOA3Q9Y6Q9 1424 aa-1.22□□□□□ -2.6
CCDC93-209ENST00000488908 CENPFP49454 3210 aa-1.22□□□□□ -2.6
CCDC93-209ENST00000488908 F8WEM9 126 aa-1.22□□□□□ -2.6
CCDC93-209ENST00000488908 M0R2Z0 102 aa-1.22□□□□□ -2.6
CCDC93-209ENST00000488908 SEC11AP67812 179 aa-1.22□□□□□ -2.6
CCDC93-209ENST00000488908 UBE2L3P68036 154 aaKnown RBP-1.22□□□□□ -2.6
CCDC93-209ENST00000488908 COX6B2Q6YFQ2 88 aa-1.22□□□□□ -2.6
CCDC93-209ENST00000488908 PRO1933Q9H354 126 aa-1.22□□□□□ -2.6
CCDC93-209ENST00000488908 FAIMQ9NVQ4 179 aa-1.22□□□□□ -2.6
CCDC93-209ENST00000488908 PRG4Q92954 1404 aaPredicted RBP-1.23□□□□□ -2.61
CCDC93-209ENST00000488908 TIAM2Q8IVF5 1701 aa-1.23□□□□□ -2.61
CCDC93-209ENST00000488908 ATP7BP35670 1465 aa-1.23□□□□□ -2.61
CCDC93-209ENST00000488908 NLRP1Q9C000 1473 aa-1.23□□□□□ -2.61
CCDC93-209ENST00000488908 GNG14A0A1W2PPG7 69 aa-1.23□□□□□ -2.61
CCDC93-209ENST00000488908 IGLC7A0M8Q6 106 aa-1.23□□□□□ -2.61
CCDC93-209ENST00000488908 K7ERU9 68 aa-1.23□□□□□ -2.61
CCDC93-209ENST00000488908 C3orf79P0CE67 100 aa-1.23□□□□□ -2.61
CCDC93-209ENST00000488908 C10orf113Q5VZT2 155 aa-1.23□□□□□ -2.61
CCDC93-209ENST00000488908 MGST2Q99735 147 aa-1.23□□□□□ -2.61
CCDC93-209ENST00000488908 AIF1LQ9BQI0 150 aa-1.23□□□□□ -2.61
CCDC93-209ENST00000488908 SMIM3Q9BZL3 60 aa-1.23□□□□□ -2.61
CCDC93-209ENST00000488908 DYNLRB1Q9NP97 96 aa-1.23□□□□□ -2.61
CCDC93-209ENST00000488908 RIMS1Q86UR5 1692 aaKnown RBP-1.23□□□□□ -2.61
CCDC93-209ENST00000488908 MARF1Q9Y4F3 1742 aaKnown RBP-1.23□□□□□ -2.61
CCDC93-209ENST00000488908 SPEF2Q9C093 1822 aa-1.24□□□□□ -2.61
CCDC93-209ENST00000488908 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.24□□□□□ -2.61
CCDC93-209ENST00000488908 IGLV5-48A0A075B6I7 105 aa-1.24□□□□□ -2.61
CCDC93-209ENST00000488908 LOC285095A0A1B0GVY8 99 aa-1.24□□□□□ -2.61
CCDC93-209ENST00000488908 SERP2Q8N6R1 65 aa-1.24□□□□□ -2.61
CCDC93-209ENST00000488908 FAM167A-AS1Q96KT0 104 aa-1.24□□□□□ -2.61
CCDC93-209ENST00000488908 SNRNP25Q9BV90 132 aaKnown RBP-1.24□□□□□ -2.61
CCDC93-209ENST00000488908 PRO3102Q9H379 93 aa-1.24□□□□□ -2.61
CCDC93-209ENST00000488908 ARAP2Q8WZ64 1704 aa-1.24□□□□□ -2.61
CCDC93-209ENST00000488908 A0A0G2JMZ2 1700 aa-1.25□□□□□ -2.61
CCDC93-209ENST00000488908 A0A1B0GU69 56 aa-1.25□□□□□ -2.61
CCDC93-209ENST00000488908 NDUFA3O95167 84 aa-1.25□□□□□ -2.61
CCDC93-209ENST00000488908 WHAMMP3Q1A5X7 153 aa-1.25□□□□□ -2.61
CCDC93-209ENST00000488908 C12orf73Q69YU5 71 aa-1.25□□□□□ -2.61
CCDC93-209ENST00000488908 C5orf38Q86SI9 138 aa-1.25□□□□□ -2.61
CCDC93-209ENST00000488908 TCEAL4Q96EI5 215 aa-1.25□□□□□ -2.61
CCDC93-209ENST00000488908 NOP10Q9NPE3 64 aaKnown RBP-1.25□□□□□ -2.61
CCDC93-209ENST00000488908 CDH23Q9H251 3354 aa-1.25□□□□□ -2.61
CCDC93-209ENST00000488908 ANKRD30AQ9BXX3 1397 aa-1.25□□□□□ -2.61
CCDC93-209ENST00000488908 LOC100130705A0A1B0GUX0 176 aa-1.26□□□□□ -2.61
CCDC93-209ENST00000488908 M0QZ58 72 aa-1.26□□□□□ -2.61
CCDC93-209ENST00000488908 SFT2D2O95562 160 aa-1.26□□□□□ -2.61
CCDC93-209ENST00000488908 LINC00158P58513 81 aa-1.26□□□□□ -2.61
CCDC93-209ENST00000488908 TTTY10Q9BZA0 68 aa-1.26□□□□□ -2.61
CCDC93-209ENST00000488908 TMEM191AQ9H0A3 160 aa-1.26□□□□□ -2.61
CCDC93-209ENST00000488908 ABCC5O15440 1437 aa-1.26□□□□□ -2.61
CCDC93-209ENST00000488908 MBD5Q9P267 1494 aa-1.26□□□□□ -2.61
CCDC93-209ENST00000488908 ASXL1Q8IXJ9 1541 aa-1.26□□□□□ -2.61
CCDC93-209ENST00000488908 TRBV7-7A0A0K0K1E9 115 aa-1.27□□□□□ -2.61
CCDC93-209ENST00000488908 HMGN4O00479 90 aa-1.27□□□□□ -2.61
CCDC93-209ENST00000488908 CKS1BP61024 79 aa-1.27□□□□□ -2.61
CCDC93-209ENST00000488908 RPL38P63173 70 aaKnown RBP-1.27□□□□□ -2.61
CCDC93-209ENST00000488908 COPS9Q8WXC6 57 aa-1.27□□□□□ -2.61
CCDC93-209ENST00000488908 LEAP2Q969E1 77 aa-1.27□□□□□ -2.61
CCDC93-209ENST00000488908 TRGV9Q99603 122 aa-1.27□□□□□ -2.61
CCDC93-209ENST00000488908 ASPMQ8IZT6 3477 aa-1.28□□□□□ -2.61
CCDC93-209ENST00000488908 QRICH2Q9H0J4 1663 aa-1.28□□□□□ -2.61
CCDC93-209ENST00000488908 FHAD1B1AJZ9 1412 aa-1.28□□□□□ -2.61
CCDC93-209ENST00000488908 COPZ1P61923 177 aa-1.28□□□□□ -2.61
CCDC93-209ENST00000488908 SMCO1Q147U7 214 aa-1.28□□□□□ -2.61
CCDC93-209ENST00000488908 C9orf153Q5TBE3 101 aa-1.28□□□□□ -2.61
CCDC93-209ENST00000488908 COMMD6Q7Z4G1 85 aa-1.28□□□□□ -2.61
CCDC93-209ENST00000488908 CCDC167Q9P0B6 97 aa-1.28□□□□□ -2.61
CCDC93-209ENST00000488908 PLXNC1O60486 1568 aa-1.29□□□□□ -2.62
CCDC93-209ENST00000488908 MAPKBP1O60336 1514 aa-1.29□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms