RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 PTTG1IPP53801 180 aa4.94□□□□□ -1.62
APOBEC3A-203ENST00000488758 RNF151Q2KHN1 245 aa4.94□□□□□ -1.62
APOBEC3A-203ENST00000488758 MUSTN1Q8IVN3 82 aa4.94□□□□□ -1.62
APOBEC3A-203ENST00000488758 CEND1Q8N111 149 aa4.94□□□□□ -1.62
APOBEC3A-203ENST00000488758 MIR7-3HGQ8N6C7 128 aa4.94□□□□□ -1.62
APOBEC3A-203ENST00000488758 DAND5Q8N907 189 aa4.94□□□□□ -1.62
APOBEC3A-203ENST00000488758 LITAFQ99732 161 aa4.94□□□□□ -1.62
APOBEC3A-203ENST00000488758 SLPIP03973 132 aa4.93□□□□□ -1.62
APOBEC3A-203ENST00000488758 HINT1P49773 126 aaPredicted RBP4.93□□□□□ -1.62
APOBEC3A-203ENST00000488758 NPC2P61916 151 aa4.93□□□□□ -1.62
APOBEC3A-203ENST00000488758 BATFQ16520 125 aa4.93□□□□□ -1.62
APOBEC3A-203ENST00000488758 Q8N814 137 aa4.93□□□□□ -1.62
APOBEC3A-203ENST00000488758 PCLOQ9Y6V0 5065 aa4.92□□□□□ -1.62
APOBEC3A-203ENST00000488758 CNBPP62633 177 aaKnown RBP4.92□□□□□ -1.62
APOBEC3A-203ENST00000488758 RPL24P83731 157 aaKnown RBP4.92□□□□□ -1.62
APOBEC3A-203ENST00000488758 BVES-AS1Q5T3Y7 98 aa4.92□□□□□ -1.62
APOBEC3A-203ENST00000488758 LINC00308Q8TCZ7 52 aa4.92□□□□□ -1.62
APOBEC3A-203ENST00000488758 LOC107984640A0A0U1RRK4 108 aa4.91□□□□□ -1.62
APOBEC3A-203ENST00000488758 NDUFC2-KCTD14E9PQ53 114 aa4.91□□□□□ -1.62
APOBEC3A-203ENST00000488758 RTL8CO15255 209 aa4.91□□□□□ -1.62
APOBEC3A-203ENST00000488758 PKIGQ9Y2B9 76 aa4.91□□□□□ -1.62
APOBEC3A-203ENST00000488758 DNAH6Q9C0G6 4158 aa4.9□□□□□ -1.62
APOBEC3A-203ENST00000488758 TLX1NBP0CAT3 122 aa4.9□□□□□ -1.63
APOBEC3A-203ENST00000488758 FXYD2P54710 66 aa4.9□□□□□ -1.63
APOBEC3A-203ENST00000488758 RPL18AQ02543 176 aaKnown RBP4.9□□□□□ -1.63
APOBEC3A-203ENST00000488758 GAGE2EQ4V326 116 aa4.9□□□□□ -1.63
APOBEC3A-203ENST00000488758 Q6ZRP5 223 aa4.9□□□□□ -1.63
APOBEC3A-203ENST00000488758 SVIPQ8NHG7 77 aa4.9□□□□□ -1.63
APOBEC3A-203ENST00000488758 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.63
APOBEC3A-203ENST00000488758 PPDPFQ9H3Y8 114 aa4.9□□□□□ -1.63
APOBEC3A-203ENST00000488758 SND1-IT1Q9HBX3 110 aa4.9□□□□□ -1.63
APOBEC3A-203ENST00000488758 GAGE2DQ9UEU5 116 aa4.9□□□□□ -1.63
APOBEC3A-203ENST00000488758 HERC2O95714 4834 aa4.89□□□□□ -1.63
APOBEC3A-203ENST00000488758 A4D1N5 150 aa4.89□□□□□ -1.63
APOBEC3A-203ENST00000488758 A6NDN8 102 aa4.89□□□□□ -1.63
APOBEC3A-203ENST00000488758 GAGE2BQ13066 116 aa4.89□□□□□ -1.63
APOBEC3A-203ENST00000488758 SOSTDC1Q6X4U4 206 aa4.89□□□□□ -1.63
APOBEC3A-203ENST00000488758 C9orf163Q8N9P6 203 aa4.89□□□□□ -1.63
APOBEC3A-203ENST00000488758 SNHG12Q9BXW3 62 aa4.89□□□□□ -1.63
APOBEC3A-203ENST00000488758 XAGE1AQ9HD64 81 aa4.89□□□□□ -1.63
APOBEC3A-203ENST00000488758 KMT2AQ03164 3969 aa4.89□□□□□ -1.63
APOBEC3A-203ENST00000488758 IGLV5-52A0A0A0MRZ9 124 aa4.88□□□□□ -1.63
APOBEC3A-203ENST00000488758 LOC107984156A0A0G2JMH3 177 aa4.88□□□□□ -1.63
APOBEC3A-203ENST00000488758 LINC00336Q6ZUF6 198 aa4.88□□□□□ -1.63
APOBEC3A-203ENST00000488758 ARL17AQ8IVW1 177 aa4.88□□□□□ -1.63
APOBEC3A-203ENST00000488758 RAB37Q96AX2 223 aa4.88□□□□□ -1.63
APOBEC3A-203ENST00000488758 NHP2Q9NX24 153 aaKnown RBP4.88□□□□□ -1.63
APOBEC3A-203ENST00000488758 CFC1BP0CG36 223 aa4.87□□□□□ -1.63
APOBEC3A-203ENST00000488758 CFC1P0CG37 223 aa4.87□□□□□ -1.63
APOBEC3A-203ENST00000488758 COL5A1-AS1Q5SY13 56 aa4.87□□□□□ -1.63
APOBEC3A-203ENST00000488758 DNAH10Q8IVF4 4471 aa4.86□□□□□ -1.63
APOBEC3A-203ENST00000488758 IGKV2-24A0A0C4DH68 120 aa4.86□□□□□ -1.63
APOBEC3A-203ENST00000488758 C16orf90A8MZG2 172 aa4.86□□□□□ -1.63
APOBEC3A-203ENST00000488758 NDUFC2O95298 119 aa4.86□□□□□ -1.63
APOBEC3A-203ENST00000488758 LINC01620Q4KN68 170 aa4.86□□□□□ -1.63
APOBEC3A-203ENST00000488758 SDIM1Q6ZPB5 146 aa4.86□□□□□ -1.63
APOBEC3A-203ENST00000488758 DPH3Q96FX2 82 aa4.86□□□□□ -1.63
APOBEC3A-203ENST00000488758 CDIP1Q9H305 208 aa4.86□□□□□ -1.63
APOBEC3A-203ENST00000488758 LINC00474Q9P2X8 69 aa4.86□□□□□ -1.63
APOBEC3A-203ENST00000488758 A0A096LNI7 61 aa4.85□□□□□ -1.63
APOBEC3A-203ENST00000488758 TRAV13-2A0A0B4J235 113 aa4.85□□□□□ -1.63
APOBEC3A-203ENST00000488758 A0A0B4J2C4 111 aa4.85□□□□□ -1.63
APOBEC3A-203ENST00000488758 FUSP35637 526 aaKnown RBP eCLIP4.85□□□□□ -1.63
APOBEC3A-203ENST00000488758 PRR3P79522 188 aaKnown RBP4.85□□□□□ -1.63
APOBEC3A-203ENST00000488758 C9orf129Q5T035 196 aaKnown RBP4.85□□□□□ -1.63
APOBEC3A-203ENST00000488758 OR13C6PQ8NH95 151 aa4.85□□□□□ -1.63
APOBEC3A-203ENST00000488758 PRO1854Q9UHT4 67 aa4.85□□□□□ -1.63
APOBEC3A-203ENST00000488758 FRAS1Q86XX4 4008 aa4.85□□□□□ -1.63
APOBEC3A-203ENST00000488758 A0A1B0GWB2 263 aa4.84□□□□□ -1.63
APOBEC3A-203ENST00000488758 H7C2G1 150 aa4.84□□□□□ -1.63
APOBEC3A-203ENST00000488758 K7ERJ3 54 aa4.84□□□□□ -1.63
APOBEC3A-203ENST00000488758 NCR3O14931 201 aa4.84□□□□□ -1.63
APOBEC3A-203ENST00000488758 VPREB1P12018 145 aa4.84□□□□□ -1.63
APOBEC3A-203ENST00000488758 LBHQ53QV2 105 aaPredicted RBP4.84□□□□□ -1.63
APOBEC3A-203ENST00000488758 S100A7L2Q5SY68 101 aa4.84□□□□□ -1.63
APOBEC3A-203ENST00000488758 NKAPP1Q8N9T2 125 aa4.84□□□□□ -1.63
APOBEC3A-203ENST00000488758 IGKV2-28A0A075B6P5 120 aa4.83□□□□□ -1.64
APOBEC3A-203ENST00000488758 TRBV10-2A0A0K0K1G8 114 aa4.83□□□□□ -1.64
APOBEC3A-203ENST00000488758 M0R378 163 aa4.83□□□□□ -1.64
APOBEC3A-203ENST00000488758 IGKV2D-28P01615 120 aa4.83□□□□□ -1.64
APOBEC3A-203ENST00000488758 CHTF8P0CG12 524 aa4.83□□□□□ -1.64
APOBEC3A-203ENST00000488758 RPL13AP40429 203 aaKnown RBP4.83□□□□□ -1.64
APOBEC3A-203ENST00000488758 KRTAP10-2P60368 255 aa4.83□□□□□ -1.64
APOBEC3A-203ENST00000488758 Q1RN00 199 aa4.83□□□□□ -1.64
APOBEC3A-203ENST00000488758 TMEM126AQ9H061 195 aa4.83□□□□□ -1.64
APOBEC3A-203ENST00000488758 DNAH2Q9P225 4427 aa4.83□□□□□ -1.64
APOBEC3A-203ENST00000488758 TAX1BP3O14907 124 aa4.82□□□□□ -1.64
APOBEC3A-203ENST00000488758 PSMB2P49721 201 aa4.82□□□□□ -1.64
APOBEC3A-203ENST00000488758 SERTAD4-AS1Q5TG53 156 aa4.82□□□□□ -1.64
APOBEC3A-203ENST00000488758 FAM19A5Q7Z5A7 132 aaPredicted RBP4.82□□□□□ -1.64
APOBEC3A-203ENST00000488758 LINC00337Q8N6G1 96 aa4.82□□□□□ -1.64
APOBEC3A-203ENST00000488758 Q8NDZ9 215 aa4.82□□□□□ -1.64
APOBEC3A-203ENST00000488758 IGLV5-37A0A075B6J1 123 aa4.81□□□□□ -1.64
APOBEC3A-203ENST00000488758 A0A1W2PNN7 141 aa4.81□□□□□ -1.64
APOBEC3A-203ENST00000488758 FAM168BA1KXE4 195 aa4.81□□□□□ -1.64
APOBEC3A-203ENST00000488758 KRTAP9-3Q9BYQ3 159 aa4.81□□□□□ -1.64
APOBEC3A-203ENST00000488758 CBY1Q9Y3M2 126 aa4.81□□□□□ -1.64
APOBEC3A-203ENST00000488758 C22orf24Q9Y442 160 aa4.81□□□□□ -1.64
APOBEC3A-203ENST00000488758 DNAH17Q9UFH2 4485 aa4.8□□□□□ -1.64
APOBEC3A-203ENST00000488758 GAGE10A6NGK3 116 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms