RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 A0A1B0GVG6 124 aa10.78□□□□□ -0.68
GGPS1-206ENST00000488594 ZNF22P17026 224 aaPredicted RBP10.78□□□□□ -0.68
GGPS1-206ENST00000488594 Q8NDZ9 215 aa10.78□□□□□ -0.68
GGPS1-206ENST00000488594 SMCO4Q9NRQ5 59 aa10.78□□□□□ -0.68
GGPS1-206ENST00000488594 ZNF625Q96I27 306 aaPredicted RBP10.77□□□□□ -0.68
GGPS1-206ENST00000488594 SEC61BP60468 96 aaKnown RBP10.77□□□□□ -0.69
GGPS1-206ENST00000488594 Q8NBF4 154 aa10.77□□□□□ -0.69
GGPS1-206ENST00000488594 SPINK1P00995 79 aa10.76□□□□□ -0.69
GGPS1-206ENST00000488594 NDUFA6P56556 154 aa10.76□□□□□ -0.69
GGPS1-206ENST00000488594 DAND5Q8N907 189 aa10.74□□□□□ -0.69
GGPS1-206ENST00000488594 COX19Q49B96 90 aa10.73□□□□□ -0.69
GGPS1-206ENST00000488594 S100PP25815 95 aa10.72□□□□□ -0.69
GGPS1-206ENST00000488594 NDUFA12Q9UI09 145 aa10.72□□□□□ -0.69
GGPS1-206ENST00000488594 LINC00158P58513 81 aa10.71□□□□□ -0.69
GGPS1-206ENST00000488594 PRYO14603 147 aa10.7□□□□□ -0.7
GGPS1-206ENST00000488594 TMEM170BQ5T4T1 132 aa10.69□□□□□ -0.7
GGPS1-206ENST00000488594 KRTAP4-1Q9BYQ7 146 aa10.69□□□□□ -0.7
GGPS1-206ENST00000488594 FSIP2Q5CZC0 6907 aa10.69□□□□□ -0.7
GGPS1-206ENST00000488594 A0A096LNJ9 63 aa10.68□□□□□ -0.7
GGPS1-206ENST00000488594 SPRR1AP35321 89 aa10.68□□□□□ -0.7
GGPS1-206ENST00000488594 FABP9Q0Z7S8 132 aa10.68□□□□□ -0.7
GGPS1-206ENST00000488594 FAM19A2Q8N3H0 131 aa10.68□□□□□ -0.7
GGPS1-206ENST00000488594 C11orf86A6NJI1 115 aa10.67□□□□□ -0.7
GGPS1-206ENST00000488594 RPS29P62273 56 aaKnown RBP10.67□□□□□ -0.7
GGPS1-206ENST00000488594 LINC00483Q53H64 154 aa10.67□□□□□ -0.7
GGPS1-206ENST00000488594 SMCR5Q8TEV8 140 aa10.67□□□□□ -0.7
GGPS1-206ENST00000488594 KCNQ1DNQ9H478 68 aa10.67□□□□□ -0.7
GGPS1-206ENST00000488594 HBDP02042 147 aa10.66□□□□□ -0.7
GGPS1-206ENST00000488594 BAGE3Q86Y29 109 aa10.66□□□□□ -0.7
GGPS1-206ENST00000488594 CRCT1Q9UGL9 99 aa10.65□□□□□ -0.7
GGPS1-206ENST00000488594 ETDCA0A1B0GVM5 59 aa10.65□□□□□ -0.71
GGPS1-206ENST00000488594 ATP6V1G1O75348 118 aa10.65□□□□□ -0.71
GGPS1-206ENST00000488594 A0A0U1RRA0 63 aa10.64□□□□□ -0.71
GGPS1-206ENST00000488594 KRTAP4-16G5E9R7 235 aaPredicted RBP10.64□□□□□ -0.71
GGPS1-206ENST00000488594 LINC00614P0C842 121 aa10.64□□□□□ -0.71
GGPS1-206ENST00000488594 UQCC3Q6UW78 93 aa10.64□□□□□ -0.71
GGPS1-206ENST00000488594 BOD1L2Q8IYS8 172 aa10.64□□□□□ -0.71
GGPS1-206ENST00000488594 TMEM218A2RU14 115 aa10.63□□□□□ -0.71
GGPS1-206ENST00000488594 SSBP3-AS1Q7Z2R9 100 aa10.63□□□□□ -0.71
GGPS1-206ENST00000488594 Q8N377 158 aa10.63□□□□□ -0.71
GGPS1-206ENST00000488594 SEC11CQ9BY50 192 aa10.63□□□□□ -0.71
GGPS1-206ENST00000488594 SLC25A20O43772 301 aa10.62□□□□□ -0.71
GGPS1-206ENST00000488594 S100A12P80511 92 aa10.62□□□□□ -0.71
GGPS1-206ENST00000488594 CLLU1Q5K131 121 aa10.62□□□□□ -0.71
GGPS1-206ENST00000488594 GAGE2AQ6NT46 116 aa10.62□□□□□ -0.71
GGPS1-206ENST00000488594 NCR3O14931 201 aa10.61□□□□□ -0.71
GGPS1-206ENST00000488594 MOBPQ13875 183 aa10.61□□□□□ -0.71
GGPS1-206ENST00000488594 XP32Q5T750 250 aa10.61□□□□□ -0.71
GGPS1-206ENST00000488594 URB1-AS1Q96HZ7 61 aa10.61□□□□□ -0.71
GGPS1-206ENST00000488594 SMIM13P0DJ93 91 aa10.6□□□□□ -0.71
GGPS1-206ENST00000488594 PMCHL1Q16048 86 aa10.6□□□□□ -0.71
GGPS1-206ENST00000488594 C18orf32Q8TCD1 76 aa10.6□□□□□ -0.71
GGPS1-206ENST00000488594 CHTOPQ9Y3Y2 248 aaKnown RBP10.6□□□□□ -0.71
GGPS1-206ENST00000488594 TMEM223A0PJW6 202 aa10.59□□□□□ -0.71
GGPS1-206ENST00000488594 IGLV9-49A0A0B4J1Y8 123 aa10.58□□□□□ -0.72
GGPS1-206ENST00000488594 TRBV10-3A0A0K0K1G6 114 aa10.58□□□□□ -0.72
GGPS1-206ENST00000488594 MEIG1Q5JSS6 88 aa10.58□□□□□ -0.72
GGPS1-206ENST00000488594 MIR7-3HGQ8N6C7 128 aa10.58□□□□□ -0.72
GGPS1-206ENST00000488594 LINC00587B1AMM8 73 aa10.57□□□□□ -0.72
GGPS1-206ENST00000488594 HERV-K104P63124 156 aa10.57□□□□□ -0.72
GGPS1-206ENST00000488594 B5MCH6 92 aa10.55□□□□□ -0.72
GGPS1-206ENST00000488594 TRAPPC1Q9Y5R8 145 aa10.54□□□□□ -0.72
GGPS1-206ENST00000488594 TRAV12-1A0A0B4J245 112 aa10.53□□□□□ -0.72
GGPS1-206ENST00000488594 MAP1LC3CQ9BXW4 147 aa10.53□□□□□ -0.72
GGPS1-206ENST00000488594 ERC2-IT1O76042 136 aa10.52□□□□□ -0.72
GGPS1-206ENST00000488594 LCE2CQ5TA81 110 aa10.52□□□□□ -0.72
GGPS1-206ENST00000488594 RHEBQ15382 184 aa10.52□□□□□ -0.73
GGPS1-206ENST00000488594 Q6ZRX8 168 aa10.51□□□□□ -0.73
GGPS1-206ENST00000488594 TRBV10-2A0A0K0K1G8 114 aa10.5□□□□□ -0.73
GGPS1-206ENST00000488594 DDTP30046 118 aa10.5□□□□□ -0.73
GGPS1-206ENST00000488594 Q9BRP9 147 aa10.5□□□□□ -0.73
GGPS1-206ENST00000488594 RPS10P5Q9NQ39 176 aa10.5□□□□□ -0.73
GGPS1-206ENST00000488594 MYMXA0A1B0GTQ4 84 aa10.49□□□□□ -0.73
GGPS1-206ENST00000488594 IFI27L1Q96BM0 104 aa10.49□□□□□ -0.73
GGPS1-206ENST00000488594 LOC107984156A0A0G2JMH3 177 aa10.48□□□□□ -0.73
GGPS1-206ENST00000488594 CFC1BP0CG36 223 aa10.48□□□□□ -0.73
GGPS1-206ENST00000488594 ARL17AQ8IVW1 177 aa10.48□□□□□ -0.73
GGPS1-206ENST00000488594 C9orf153Q5TBE3 101 aa10.47□□□□□ -0.73
GGPS1-206ENST00000488594 JOSD1Q15040 202 aaPredicted RBP10.46□□□□□ -0.74
GGPS1-206ENST00000488594 KRTAP19-2Q3LHN2 52 aa10.46□□□□□ -0.74
GGPS1-206ENST00000488594 SPANXB1Q9NS25 103 aaPredicted RBP10.45□□□□□ -0.74
GGPS1-206ENST00000488594 MT1HP80294 61 aa10.44□□□□□ -0.74
GGPS1-206ENST00000488594 C10orf91Q5T1B1 145 aa10.44□□□□□ -0.74
GGPS1-206ENST00000488594 CHCHD1Q96BP2 118 aaKnown RBP10.44□□□□□ -0.74
GGPS1-206ENST00000488594 IGLV6-57P01721 117 aa10.41□□□□□ -0.74
GGPS1-206ENST00000488594 IFITM2Q01629 132 aa10.41□□□□□ -0.74
GGPS1-206ENST00000488594 S100A7L2Q5SY68 101 aa10.41□□□□□ -0.74
GGPS1-206ENST00000488594 MIEN1Q9BRT3 115 aa10.41□□□□□ -0.74
GGPS1-206ENST00000488594 IGLV8-61A0A075B6I0 122 aa10.4□□□□□ -0.74
GGPS1-206ENST00000488594 C5orf52A6NGY3 159 aa10.4□□□□□ -0.74
GGPS1-206ENST00000488594 PCOTHQ58A44 107 aa10.4□□□□□ -0.74
GGPS1-206ENST00000488594 LIMD2Q9BT23 127 aa10.4□□□□□ -0.74
GGPS1-206ENST00000488594 NDUFC2O95298 119 aa10.39□□□□□ -0.75
GGPS1-206ENST00000488594 COMMD7Q86VX2 200 aa10.39□□□□□ -0.75
GGPS1-206ENST00000488594 TRAV23DV6A0A075B6W5 121 aa10.39□□□□□ -0.75
GGPS1-206ENST00000488594 LEPROTO15243 131 aa10.38□□□□□ -0.75
GGPS1-206ENST00000488594 ZNF73O43830 326 aaPredicted RBP10.37□□□□□ -0.75
GGPS1-206ENST00000488594 TSPEAR-AS2P59090 65 aa10.37□□□□□ -0.75
GGPS1-206ENST00000488594 SLC25A34Q6PIV7 304 aa10.35□□□□□ -0.75
GGPS1-206ENST00000488594 ST20-AS1Q8NBB2 130 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms