RNA–Protein interactions for RNA: ENST00000488349.1

SCRN3-209, Transcript of secernin 3, humanhuman

TSL 4

Gene SCRN3, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-209ENST00000488349 HIST1H2BCP62807 126 aa13.41□□□□□ -0.26
SCRN3-209ENST00000488349 HIST2H2BEQ16778 126 aa13.41□□□□□ -0.26
SCRN3-209ENST00000488349 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.41□□□□□ -0.26
SCRN3-209ENST00000488349 HIST1H2BHQ93079 126 aa13.41□□□□□ -0.26
SCRN3-209ENST00000488349 HIST1H2BNQ99877 126 aa13.41□□□□□ -0.26
SCRN3-209ENST00000488349 HIST1H2BMQ99879 126 aa13.41□□□□□ -0.26
SCRN3-209ENST00000488349 TSPEAR-AS2P59090 65 aa13.4□□□□□ -0.26
SCRN3-209ENST00000488349 UBR4Q5T4S7 5183 aa13.4□□□□□ -0.27
SCRN3-209ENST00000488349 LINC00158P58513 81 aa13.38□□□□□ -0.27
SCRN3-209ENST00000488349 PMCHL2Q9BQD1 86 aa13.38□□□□□ -0.27
SCRN3-209ENST00000488349 A0A0U1RRA0 63 aa13.37□□□□□ -0.27
SCRN3-209ENST00000488349 SMIM13P0DJ93 91 aa13.37□□□□□ -0.27
SCRN3-209ENST00000488349 PLNP26678 52 aa13.37□□□□□ -0.27
SCRN3-209ENST00000488349 KRTAP13-1Q8IUC0 172 aa13.37□□□□□ -0.27
SCRN3-209ENST00000488349 NDUFA12Q9UI09 145 aa13.37□□□□□ -0.27
SCRN3-209ENST00000488349 IGLV1-50A0A075B6I6 118 aa13.36□□□□□ -0.27
SCRN3-209ENST00000488349 IGKV2-28A0A075B6P5 120 aa13.36□□□□□ -0.27
SCRN3-209ENST00000488349 IGKV2D-28P01615 120 aa13.36□□□□□ -0.27
SCRN3-209ENST00000488349 DPM2O94777 84 aa13.35□□□□□ -0.27
SCRN3-209ENST00000488349 HERV-K104P63124 156 aa13.35□□□□□ -0.27
SCRN3-209ENST00000488349 RPL24P83731 157 aaKnown RBP13.35□□□□□ -0.27
SCRN3-209ENST00000488349 LRP2P98164 4655 aa13.35□□□□□ -0.27
SCRN3-209ENST00000488349 LEPROTO15243 131 aa13.34□□□□□ -0.27
SCRN3-209ENST00000488349 RPL28P46779 137 aaKnown RBP13.34□□□□□ -0.27
SCRN3-209ENST00000488349 IGKCP01834 107 aa13.33□□□□□ -0.28
SCRN3-209ENST00000488349 MEIG1Q5JSS6 88 aa13.32□□□□□ -0.28
SCRN3-209ENST00000488349 MAP1LC3CQ9BXW4 147 aa13.32□□□□□ -0.28
SCRN3-209ENST00000488349 MYMXA0A1B0GTQ4 84 aa13.31□□□□□ -0.28
SCRN3-209ENST00000488349 TMEM238C9JI98 176 aa13.31□□□□□ -0.28
SCRN3-209ENST00000488349 MIR7-3HGQ8N6C7 128 aa13.31□□□□□ -0.28
SCRN3-209ENST00000488349 PLEKHB2Q96CS7 222 aa13.31□□□□□ -0.28
SCRN3-209ENST00000488349 TMEM126AQ9H061 195 aa13.3□□□□□ -0.28
SCRN3-209ENST00000488349 J3QQQ9 107 aa13.29□□□□□ -0.28
SCRN3-209ENST00000488349 M0R378 163 aa13.29□□□□□ -0.28
SCRN3-209ENST00000488349 SYS1-DBNDD2H3BUS1 97 aa13.27□□□□□ -0.29
SCRN3-209ENST00000488349 UBE2AP49459 152 aa13.27□□□□□ -0.29
SCRN3-209ENST00000488349 HERVK_113P61574 105 aa13.27□□□□□ -0.29
SCRN3-209ENST00000488349 COA6Q5JTJ3 125 aaKnown RBP13.26□□□□□ -0.29
SCRN3-209ENST00000488349 BOD1L2Q8IYS8 172 aa13.26□□□□□ -0.29
SCRN3-209ENST00000488349 LINC00587B1AMM8 73 aa13.25□□□□□ -0.29
SCRN3-209ENST00000488349 ATP6V1G1O75348 118 aa13.25□□□□□ -0.29
SCRN3-209ENST00000488349 PRLHP81277 87 aa13.25□□□□□ -0.29
SCRN3-209ENST00000488349 A0A087X002 238 aa13.24□□□□□ -0.29
SCRN3-209ENST00000488349 RPL13AP40429 203 aaKnown RBP13.24□□□□□ -0.29
SCRN3-209ENST00000488349 NMUP48645 174 aa13.24□□□□□ -0.29
SCRN3-209ENST00000488349 LINC01545Q5VT33 79 aa13.23□□□□□ -0.29
SCRN3-209ENST00000488349 FAM19A1Q7Z5A9 133 aa13.23□□□□□ -0.29
SCRN3-209ENST00000488349 DAND5Q8N907 189 aa13.23□□□□□ -0.29
SCRN3-209ENST00000488349 LOC107984156A0A0G2JMH3 177 aa13.22□□□□□ -0.29
SCRN3-209ENST00000488349 E9PLD3 99 aa13.22□□□□□ -0.29
SCRN3-209ENST00000488349 LGALS3P17931 250 aaKnown RBP13.22□□□□□ -0.29
SCRN3-209ENST00000488349 ARL17AQ8IVW1 177 aa13.22□□□□□ -0.29
SCRN3-209ENST00000488349 NCR3O14931 201 aa13.21□□□□□ -0.29
SCRN3-209ENST00000488349 ANAPC11Q9NYG5 84 aa13.21□□□□□ -0.29
SCRN3-209ENST00000488349 PET117Q6UWS5 81 aa13.2□□□□□ -0.3
SCRN3-209ENST00000488349 LPAP08519 4548 aa13.19□□□□□ -0.3
SCRN3-209ENST00000488349 IGKV2D-26A0A0A0MRZ7 120 aa13.18□□□□□ -0.3
SCRN3-209ENST00000488349 C3orf79P0CE67 100 aa13.18□□□□□ -0.3
SCRN3-209ENST00000488349 A0A0J9YXY3 114 aa13.16□□□□□ -0.3
SCRN3-209ENST00000488349 PRYO14603 147 aa13.16□□□□□ -0.3
SCRN3-209ENST00000488349 SPRR1AP35321 89 aa13.16□□□□□ -0.3
SCRN3-209ENST00000488349 KRTAP13-2Q52LG2 175 aa13.16□□□□□ -0.3
SCRN3-209ENST00000488349 KCNQ1DNQ9H478 68 aa13.16□□□□□ -0.3
SCRN3-209ENST00000488349 TRBV10-3A0A0K0K1G6 114 aa13.15□□□□□ -0.3
SCRN3-209ENST00000488349 CRYGAP11844 174 aa13.15□□□□□ -0.3
SCRN3-209ENST00000488349 EIF4EBP3O60516 100 aaPredicted RBP13.14□□□□□ -0.31
SCRN3-209ENST00000488349 ADAMTSL4-AS1Q5T5F5 129 aa13.14□□□□□ -0.31
SCRN3-209ENST00000488349 SOSTDC1Q6X4U4 206 aa13.14□□□□□ -0.31
SCRN3-209ENST00000488349 KRTAP4-16G5E9R7 235 aaPredicted RBP13.13□□□□□ -0.31
SCRN3-209ENST00000488349 FAM229BQ4G0N7 80 aa13.13□□□□□ -0.31
SCRN3-209ENST00000488349 TRBV10-2A0A0K0K1G8 114 aa13.11□□□□□ -0.31
SCRN3-209ENST00000488349 LINC00337Q8N6G1 96 aa13.11□□□□□ -0.31
SCRN3-209ENST00000488349 LITAFQ99732 161 aa13.11□□□□□ -0.31
SCRN3-209ENST00000488349 KRTDAPP60985 99 aa13.1□□□□□ -0.31
SCRN3-209ENST00000488349 TYMSOSQ8TAI1 123 aa13.1□□□□□ -0.31
SCRN3-209ENST00000488349 HIGD2AQ9BW72 106 aa13.1□□□□□ -0.31
SCRN3-209ENST00000488349 NDUFC2O95298 119 aa13.09□□□□□ -0.31
SCRN3-209ENST00000488349 SPANXB1Q9NS25 103 aaPredicted RBP13.09□□□□□ -0.31
SCRN3-209ENST00000488349 TTTY13Q9BZ97 58 aa13.08□□□□□ -0.32
SCRN3-209ENST00000488349 NPC2P61916 151 aa13.07□□□□□ -0.32
SCRN3-209ENST00000488349 MIEN1Q9BRT3 115 aa13.07□□□□□ -0.32
SCRN3-209ENST00000488349 DDTP30046 118 aa13.06□□□□□ -0.32
SCRN3-209ENST00000488349 S100A1P23297 94 aa13.05□□□□□ -0.32
SCRN3-209ENST00000488349 SPRR4Q96PI1 79 aa13.05□□□□□ -0.32
SCRN3-209ENST00000488349 ETDCA0A1B0GVM5 59 aa13.04□□□□□ -0.32
SCRN3-209ENST00000488349 TIMM17BO60830 172 aa13.04□□□□□ -0.32
SCRN3-209ENST00000488349 IGLV6-57P01721 117 aa13.04□□□□□ -0.32
SCRN3-209ENST00000488349 SMCR5Q8TEV8 140 aa13.04□□□□□ -0.32
SCRN3-209ENST00000488349 ZNF815PA8K554 130 aa13.03□□□□□ -0.32
SCRN3-209ENST00000488349 B5MCH6 92 aa13.02□□□□□ -0.33
SCRN3-209ENST00000488349 TSPAN13O95857 204 aa13.02□□□□□ -0.33
SCRN3-209ENST00000488349 ANKRD39Q53RE8 183 aa13.01□□□□□ -0.33
SCRN3-209ENST00000488349 C3orf22Q8N5N4 141 aa13.01□□□□□ -0.33
SCRN3-209ENST00000488349 LINC00308Q8TCZ7 52 aa13.01□□□□□ -0.33
SCRN3-209ENST00000488349 RNF213Q63HN8 5207 aa13□□□□□ -0.33
SCRN3-209ENST00000488349 C20orf202A1L168 122 aa12.99□□□□□ -0.33
SCRN3-209ENST00000488349 ATOH7Q8N100 152 aa12.99□□□□□ -0.33
SCRN3-209ENST00000488349 S100A12P80511 92 aa12.98□□□□□ -0.33
SCRN3-209ENST00000488349 S100A7L2Q5SY68 101 aa12.98□□□□□ -0.33
SCRN3-209ENST00000488349 HIST3H2BBQ8N257 126 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms