RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 PLEKHB2Q96CS7 222 aa3.07□□□□□ -1.92
COL4A3-206ENST00000487633 TMEM141Q96I45 108 aa3.07□□□□□ -1.92
COL4A3-206ENST00000487633 SCGB3A1Q96QR1 104 aa3.07□□□□□ -1.92
COL4A3-206ENST00000487633 C2orf88Q9BSF0 95 aa3.07□□□□□ -1.92
COL4A3-206ENST00000487633 VCX2Q9H322 139 aa3.07□□□□□ -1.92
COL4A3-206ENST00000487633 PYGO1Q9Y3Y4 419 aa3.07□□□□□ -1.92
COL4A3-206ENST00000487633 IGLV4-3A0A075B6K6 122 aa3.06□□□□□ -1.92
COL4A3-206ENST00000487633 LINC01549A6NIU2 74 aa3.06□□□□□ -1.92
COL4A3-206ENST00000487633 LINC00614P0C842 121 aa3.06□□□□□ -1.92
COL4A3-206ENST00000487633 UBE2AP49459 152 aa3.06□□□□□ -1.92
COL4A3-206ENST00000487633 SNRPEP62304 92 aaKnown RBP3.06□□□□□ -1.92
COL4A3-206ENST00000487633 SPAG11AQ6PDA7 123 aa3.06□□□□□ -1.92
COL4A3-206ENST00000487633 C18orf32Q8TCD1 76 aa3.06□□□□□ -1.92
COL4A3-206ENST00000487633 TOMM6Q96B49 74 aa3.06□□□□□ -1.92
COL4A3-206ENST00000487633 C5orf52A6NGY3 159 aa3.05□□□□□ -1.92
COL4A3-206ENST00000487633 IGIPA6NJ69 53 aa3.05□□□□□ -1.92
COL4A3-206ENST00000487633 TMEM238C9JI98 176 aa3.05□□□□□ -1.92
COL4A3-206ENST00000487633 HIST1H2BKO60814 126 aa3.05□□□□□ -1.92
COL4A3-206ENST00000487633 HBDP02042 147 aa3.05□□□□□ -1.92
COL4A3-206ENST00000487633 HIST1H2BJP06899 126 aa3.05□□□□□ -1.92
COL4A3-206ENST00000487633 NPSP0C0P6 89 aa3.05□□□□□ -1.92
COL4A3-206ENST00000487633 HIST1H2BOP23527 126 aa3.05□□□□□ -1.92
COL4A3-206ENST00000487633 HIST1H2BBP33778 126 aa3.05□□□□□ -1.92
COL4A3-206ENST00000487633 NDUFA6P56556 154 aa3.05□□□□□ -1.92
COL4A3-206ENST00000487633 HIST1H2BDP58876 126 aa3.05□□□□□ -1.92
COL4A3-206ENST00000487633 HIST1H2BCP62807 126 aa3.05□□□□□ -1.92
COL4A3-206ENST00000487633 PMCHL1Q16048 86 aa3.05□□□□□ -1.92
COL4A3-206ENST00000487633 HIST2H2BEQ16778 126 aa3.05□□□□□ -1.92
COL4A3-206ENST00000487633 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.05□□□□□ -1.92
COL4A3-206ENST00000487633 ZC2HC1BQ5TFG8 222 aa3.05□□□□□ -1.92
COL4A3-206ENST00000487633 ERASQ7Z444 233 aa3.05□□□□□ -1.92
COL4A3-206ENST00000487633 HIST1H2BHQ93079 126 aa3.05□□□□□ -1.92
COL4A3-206ENST00000487633 PACRGQ96M98 296 aaPredicted RBP3.05□□□□□ -1.92
COL4A3-206ENST00000487633 TIMM17AQ99595 171 aa3.05□□□□□ -1.92
COL4A3-206ENST00000487633 HIST1H2BNQ99877 126 aa3.05□□□□□ -1.92
COL4A3-206ENST00000487633 HIST1H2BMQ99879 126 aa3.05□□□□□ -1.92
COL4A3-206ENST00000487633 GEMIN7Q9H840 131 aaKnown RBP3.05□□□□□ -1.92
COL4A3-206ENST00000487633 KMT2DO14686 5537 aa3.04□□□□□ -1.92
COL4A3-206ENST00000487633 IGKV2-28A0A075B6P5 120 aa3.04□□□□□ -1.92
COL4A3-206ENST00000487633 LINC01546A6NGU7 62 aa3.04□□□□□ -1.92
COL4A3-206ENST00000487633 HSBP1O75506 76 aa3.04□□□□□ -1.92
COL4A3-206ENST00000487633 IGKV2D-28P01615 120 aa3.04□□□□□ -1.92
COL4A3-206ENST00000487633 SEC11AP67812 179 aa3.04□□□□□ -1.92
COL4A3-206ENST00000487633 CHCHD1Q96BP2 118 aaKnown RBP3.04□□□□□ -1.92
COL4A3-206ENST00000487633 AMELXQ99217 191 aa3.04□□□□□ -1.92
COL4A3-206ENST00000487633 TRBV30A0A0K0K1B3 111 aa3.03□□□□□ -1.92
COL4A3-206ENST00000487633 ATP5LO75964 103 aa3.03□□□□□ -1.92
COL4A3-206ENST00000487633 PRSS2P07478 247 aa3.03□□□□□ -1.92
COL4A3-206ENST00000487633 AKR1D1P51857 326 aa3.03□□□□□ -1.92
COL4A3-206ENST00000487633 HERVK_113P63121 156 aa3.03□□□□□ -1.92
COL4A3-206ENST00000487633 PMVKQ15126 192 aa3.03□□□□□ -1.92
COL4A3-206ENST00000487633 LBHQ53QV2 105 aaPredicted RBP3.03□□□□□ -1.92
COL4A3-206ENST00000487633 PDZD11Q5EBL8 140 aa3.03□□□□□ -1.92
COL4A3-206ENST00000487633 Q6Q795 121 aa3.03□□□□□ -1.92
COL4A3-206ENST00000487633 URB1-AS1Q96HZ7 61 aa3.03□□□□□ -1.92
COL4A3-206ENST00000487633 SPRR4Q96PI1 79 aa3.03□□□□□ -1.92
COL4A3-206ENST00000487633 CST9LQ9H4G1 147 aa3.03□□□□□ -1.92
COL4A3-206ENST00000487633 TP73-AS1Q9UF72 201 aa3.03□□□□□ -1.92
COL4A3-206ENST00000487633 F8WDY8 70 aa3.02□□□□□ -1.93
COL4A3-206ENST00000487633 H0Y8G0 127 aa3.02□□□□□ -1.93
COL4A3-206ENST00000487633 SERF1AO75920 110 aa3.02□□□□□ -1.93
COL4A3-206ENST00000487633 S100A6P06703 90 aa3.02□□□□□ -1.93
COL4A3-206ENST00000487633 LINC00310P59036 64 aa3.02□□□□□ -1.93
COL4A3-206ENST00000487633 CKS1BP61024 79 aa3.02□□□□□ -1.93
COL4A3-206ENST00000487633 C4orf48Q5BLP8 95 aa3.02□□□□□ -1.93
COL4A3-206ENST00000487633 C6orf226Q5I0X4 101 aa3.02□□□□□ -1.93
COL4A3-206ENST00000487633 FAM19A1Q7Z5A9 133 aa3.02□□□□□ -1.93
COL4A3-206ENST00000487633 HIST3H2BBQ8N257 126 aa3.02□□□□□ -1.93
COL4A3-206ENST00000487633 FAM19A2Q8N3H0 131 aa3.02□□□□□ -1.93
COL4A3-206ENST00000487633 TOMM7Q9P0U1 55 aa3.02□□□□□ -1.93
COL4A3-206ENST00000487633 A0A096LNJ9 63 aa3.01□□□□□ -1.93
COL4A3-206ENST00000487633 TINCRA0A1B0GVN0 87 aa3.01□□□□□ -1.93
COL4A3-206ENST00000487633 H3BRM9 83 aa3.01□□□□□ -1.93
COL4A3-206ENST00000487633 M0R378 163 aa3.01□□□□□ -1.93
COL4A3-206ENST00000487633 LEPROTL1O95214 131 aa3.01□□□□□ -1.93
COL4A3-206ENST00000487633 SPINK1P00995 79 aa3.01□□□□□ -1.93
COL4A3-206ENST00000487633 FABP4P15090 132 aa3.01□□□□□ -1.93
COL4A3-206ENST00000487633 LINC00518Q8N0U6 118 aa3.01□□□□□ -1.93
COL4A3-206ENST00000487633 Q8NDZ9 215 aa3.01□□□□□ -1.93
COL4A3-206ENST00000487633 IFI27L1Q96BM0 104 aa3.01□□□□□ -1.93
COL4A3-206ENST00000487633 CDKN2A-AS1Q9UH64 79 aa3.01□□□□□ -1.93
COL4A3-206ENST00000487633 HSPB8Q9UJY1 196 aa3.01□□□□□ -1.93
COL4A3-206ENST00000487633 CHTOPQ9Y3Y2 248 aaKnown RBP3.01□□□□□ -1.93
COL4A3-206ENST00000487633 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
COL4A3-206ENST00000487633 SPINK8P0C7L1 97 aa3□□□□□ -1.93
COL4A3-206ENST00000487633 KRTAP10-10P60014 251 aa3□□□□□ -1.93
COL4A3-206ENST00000487633 COA6Q5JTJ3 125 aaKnown RBP3□□□□□ -1.93
COL4A3-206ENST00000487633 TMEM170BQ5T4T1 132 aa3□□□□□ -1.93
COL4A3-206ENST00000487633 FAM19A3Q7Z5A8 133 aa3□□□□□ -1.93
COL4A3-206ENST00000487633 LINC01561Q8N1V8 128 aa3□□□□□ -1.93
COL4A3-206ENST00000487633 HIST1H2BLQ99880 126 aa3□□□□□ -1.93
COL4A3-206ENST00000487633 TMEM126AQ9H061 195 aa3□□□□□ -1.93
COL4A3-206ENST00000487633 IGLV5-45A0A087WSX0 123 aa2.99□□□□□ -1.93
COL4A3-206ENST00000487633 TRAV12-1A0A0B4J245 112 aa2.99□□□□□ -1.93
COL4A3-206ENST00000487633 IGLC3P0DOY3 106 aa2.99□□□□□ -1.93
COL4A3-206ENST00000487633 Q8IZM0 81 aa2.99□□□□□ -1.93
COL4A3-206ENST00000487633 COX7B2Q8TF08 81 aa2.99□□□□□ -1.93
COL4A3-206ENST00000487633 C12orf57Q99622 126 aa2.99□□□□□ -1.93
COL4A3-206ENST00000487633 HIGD2AQ9BW72 106 aa2.99□□□□□ -1.93
COL4A3-206ENST00000487633 MAP1LC3CQ9BXW4 147 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms