RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 CHCHD1Q96BP2 118 aaKnown RBP13.87□□□□□ -0.19
PLOD3-215ENST00000487563 FAM229BQ4G0N7 80 aa13.86□□□□□ -0.19
PLOD3-215ENST00000487563 IFI27L1Q96BM0 104 aa13.85□□□□□ -0.19
PLOD3-215ENST00000487563 IGKV2D-26A0A0A0MRZ7 120 aa13.83□□□□□ -0.2
PLOD3-215ENST00000487563 TRAV12-1A0A0B4J245 112 aa13.83□□□□□ -0.2
PLOD3-215ENST00000487563 A0A0U1RRA0 63 aa13.83□□□□□ -0.2
PLOD3-215ENST00000487563 TMEM223A0PJW6 202 aa13.83□□□□□ -0.2
PLOD3-215ENST00000487563 M0R378 163 aa13.83□□□□□ -0.2
PLOD3-215ENST00000487563 KRTAP13-2Q52LG2 175 aa13.83□□□□□ -0.2
PLOD3-215ENST00000487563 Q8NDZ9 215 aa13.83□□□□□ -0.2
PLOD3-215ENST00000487563 ATP6V1G1O75348 118 aa13.81□□□□□ -0.2
PLOD3-215ENST00000487563 CBLN2Q8IUK8 224 aa13.8□□□□□ -0.2
PLOD3-215ENST00000487563 LINC00304Q8N9R0 145 aa13.8□□□□□ -0.2
PLOD3-215ENST00000487563 YPEL4Q96NS1 127 aa13.8□□□□□ -0.2
PLOD3-215ENST00000487563 HSBP1O75506 76 aa13.79□□□□□ -0.2
PLOD3-215ENST00000487563 MEIG1Q5JSS6 88 aa13.79□□□□□ -0.2
PLOD3-215ENST00000487563 HIGD2AQ9BW72 106 aa13.78□□□□□ -0.2
PLOD3-215ENST00000487563 SMIM13P0DJ93 91 aa13.77□□□□□ -0.21
PLOD3-215ENST00000487563 FAM19A2Q8N3H0 131 aa13.75□□□□□ -0.21
PLOD3-215ENST00000487563 H0Y8G0 127 aa13.74□□□□□ -0.21
PLOD3-215ENST00000487563 HERV-K104P63124 156 aa13.74□□□□□ -0.21
PLOD3-215ENST00000487563 BOD1L2Q8IYS8 172 aa13.74□□□□□ -0.21
PLOD3-215ENST00000487563 PLEKHB2Q96CS7 222 aa13.74□□□□□ -0.21
PLOD3-215ENST00000487563 RETNLBQ9BQ08 111 aa13.73□□□□□ -0.21
PLOD3-215ENST00000487563 MIR7-3HGQ8N6C7 128 aa13.72□□□□□ -0.21
PLOD3-215ENST00000487563 LINC00587B1AMM8 73 aa13.71□□□□□ -0.21
PLOD3-215ENST00000487563 NCR3O14931 201 aa13.71□□□□□ -0.21
PLOD3-215ENST00000487563 NDUFA12Q9UI09 145 aa13.71□□□□□ -0.21
PLOD3-215ENST00000487563 PRYO14603 147 aa13.7□□□□□ -0.22
PLOD3-215ENST00000487563 MYMXA0A1B0GTQ4 84 aa13.69□□□□□ -0.22
PLOD3-215ENST00000487563 MAP1LC3CQ9BXW4 147 aa13.69□□□□□ -0.22
PLOD3-215ENST00000487563 C3orf22Q8N5N4 141 aa13.68□□□□□ -0.22
PLOD3-215ENST00000487563 ZNF706Q9Y5V0 76 aaPredicted RBP13.68□□□□□ -0.22
PLOD3-215ENST00000487563 LEPROTL1O95214 131 aa13.67□□□□□ -0.22
PLOD3-215ENST00000487563 TRGC2P03986 189 aa13.67□□□□□ -0.22
PLOD3-215ENST00000487563 SPRR4Q96PI1 79 aa13.66□□□□□ -0.22
PLOD3-215ENST00000487563 ETDCA0A1B0GVM5 59 aa13.64□□□□□ -0.23
PLOD3-215ENST00000487563 SERF1AO75920 110 aa13.64□□□□□ -0.23
PLOD3-215ENST00000487563 CTAG1AP78358 180 aa13.64□□□□□ -0.23
PLOD3-215ENST00000487563 S100A12P80511 92 aa13.64□□□□□ -0.23
PLOD3-215ENST00000487563 PLNP26678 52 aa13.63□□□□□ -0.23
PLOD3-215ENST00000487563 LINC00337Q8N6G1 96 aa13.63□□□□□ -0.23
PLOD3-215ENST00000487563 A0A0U1RQV1 116 aa13.62□□□□□ -0.23
PLOD3-215ENST00000487563 LEPROTO15243 131 aa13.62□□□□□ -0.23
PLOD3-215ENST00000487563 KCNQ1DNQ9H478 68 aa13.62□□□□□ -0.23
PLOD3-215ENST00000487563 TRBV10-3A0A0K0K1G6 114 aa13.61□□□□□ -0.23
PLOD3-215ENST00000487563 TSPEAR-AS2P59090 65 aa13.61□□□□□ -0.23
PLOD3-215ENST00000487563 HSPB8Q9UJY1 196 aa13.61□□□□□ -0.23
PLOD3-215ENST00000487563 IGLV7-46A0A075B6I9 117 aa13.6□□□□□ -0.23
PLOD3-215ENST00000487563 SPRR1AP35321 89 aa13.6□□□□□ -0.23
PLOD3-215ENST00000487563 HERVK_113P61574 105 aa13.6□□□□□ -0.23
PLOD3-215ENST00000487563 SPAG11AQ6PDA7 123 aa13.6□□□□□ -0.23
PLOD3-215ENST00000487563 FABP4P15090 132 aa13.59□□□□□ -0.23
PLOD3-215ENST00000487563 LINC00310P59036 64 aa13.59□□□□□ -0.23
PLOD3-215ENST00000487563 DAND5Q8N907 189 aa13.59□□□□□ -0.23
PLOD3-215ENST00000487563 CDIP1Q9H305 208 aa13.59□□□□□ -0.23
PLOD3-215ENST00000487563 DPM2O94777 84 aa13.58□□□□□ -0.24
PLOD3-215ENST00000487563 C4orf48Q5BLP8 95 aa13.58□□□□□ -0.24
PLOD3-215ENST00000487563 SMCR5Q8TEV8 140 aa13.58□□□□□ -0.24
PLOD3-215ENST00000487563 J3QQQ9 107 aa13.57□□□□□ -0.24
PLOD3-215ENST00000487563 MIEN1Q9BRT3 115 aa13.57□□□□□ -0.24
PLOD3-215ENST00000487563 PPDPFQ9H3Y8 114 aa13.57□□□□□ -0.24
PLOD3-215ENST00000487563 LGALS3P17931 250 aaKnown RBP13.56□□□□□ -0.24
PLOD3-215ENST00000487563 TPRXLQ17RH7 258 aa13.56□□□□□ -0.24
PLOD3-215ENST00000487563 PMCHL2Q9BQD1 86 aa13.56□□□□□ -0.24
PLOD3-215ENST00000487563 MUC2Q02817 5179 aa13.55□□□□□ -0.24
PLOD3-215ENST00000487563 KRTAP4-16G5E9R7 235 aaPredicted RBP13.55□□□□□ -0.24
PLOD3-215ENST00000487563 IGKCP01834 107 aa13.54□□□□□ -0.24
PLOD3-215ENST00000487563 DDTP30046 118 aa13.54□□□□□ -0.24
PLOD3-215ENST00000487563 NMUP48645 174 aa13.54□□□□□ -0.24
PLOD3-215ENST00000487563 TRBV10-2A0A0K0K1G8 114 aa13.52□□□□□ -0.25
PLOD3-215ENST00000487563 Q8NBF4 154 aa13.52□□□□□ -0.25
PLOD3-215ENST00000487563 LOC107984156A0A0G2JMH3 177 aa13.51□□□□□ -0.25
PLOD3-215ENST00000487563 ARL17AQ8IVW1 177 aa13.51□□□□□ -0.25
PLOD3-215ENST00000487563 SPANXB1Q9NS25 103 aaPredicted RBP13.51□□□□□ -0.25
PLOD3-215ENST00000487563 B5MCH6 92 aa13.5□□□□□ -0.25
PLOD3-215ENST00000487563 GAGE2AQ6NT46 116 aa13.5□□□□□ -0.25
PLOD3-215ENST00000487563 S100A7L2Q5SY68 101 aa13.49□□□□□ -0.25
PLOD3-215ENST00000487563 SLC7A5P1Q8MH63 180 aa13.48□□□□□ -0.25
PLOD3-215ENST00000487563 LINC00483Q53H64 154 aa13.47□□□□□ -0.25
PLOD3-215ENST00000487563 COLCA2A8K830 154 aa13.46□□□□□ -0.25
PLOD3-215ENST00000487563 FP248Q71RG6 208 aaPredicted RBP13.46□□□□□ -0.25
PLOD3-215ENST00000487563 NDUFC2O95298 119 aa13.45□□□□□ -0.26
PLOD3-215ENST00000487563 IGLV9-49A0A0B4J1Y8 123 aa13.44□□□□□ -0.26
PLOD3-215ENST00000487563 ERC2-IT1O76042 136 aa13.44□□□□□ -0.26
PLOD3-215ENST00000487563 NPC2P61916 151 aa13.44□□□□□ -0.26
PLOD3-215ENST00000487563 Q6ZRX8 168 aa13.44□□□□□ -0.26
PLOD3-215ENST00000487563 SPINK1P00995 79 aa13.43□□□□□ -0.26
PLOD3-215ENST00000487563 MOBPQ13875 183 aa13.43□□□□□ -0.26
PLOD3-215ENST00000487563 TRAV23DV6A0A075B6W5 121 aa13.42□□□□□ -0.26
PLOD3-215ENST00000487563 Q9BRP9 147 aa13.42□□□□□ -0.26
PLOD3-215ENST00000487563 A0A0J9YXY3 114 aa13.41□□□□□ -0.26
PLOD3-215ENST00000487563 E9PLD3 99 aa13.41□□□□□ -0.26
PLOD3-215ENST00000487563 IGLV6-57P01721 117 aa13.41□□□□□ -0.26
PLOD3-215ENST00000487563 JOSD1Q15040 202 aaPredicted RBP13.4□□□□□ -0.26
PLOD3-215ENST00000487563 MUC17Q685J3 4493 aa13.4□□□□□ -0.26
PLOD3-215ENST00000487563 SOSTDC1Q6X4U4 206 aa13.39□□□□□ -0.27
PLOD3-215ENST00000487563 ADAMTSL4-AS1Q5T5F5 129 aa13.37□□□□□ -0.27
PLOD3-215ENST00000487563 SYS1-DBNDD2H3BUS1 97 aa13.36□□□□□ -0.27
PLOD3-215ENST00000487563 ZNF73O43830 326 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms