RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 MRPL18Q9H0U6 180 aaKnown RBP8.47□□□□□ -1.05
MCF2L-228ENST00000487354 IGLC3P0DOY3 106 aa8.46□□□□□ -1.06
MCF2L-228ENST00000487354 PMVKQ15126 192 aa8.46□□□□□ -1.06
MCF2L-228ENST00000487354 KIAA1644Q3SXP7 199 aa8.46□□□□□ -1.06
MCF2L-228ENST00000487354 LINC00483Q53H64 154 aa8.46□□□□□ -1.06
MCF2L-228ENST00000487354 ZNF706Q9Y5V0 76 aaPredicted RBP8.46□□□□□ -1.06
MCF2L-228ENST00000487354 COX17Q14061 63 aa8.45□□□□□ -1.06
MCF2L-228ENST00000487354 ZNF625Q96I27 306 aaPredicted RBP8.45□□□□□ -1.06
MCF2L-228ENST00000487354 KRTAP4-16G5E9R7 235 aaPredicted RBP8.44□□□□□ -1.06
MCF2L-228ENST00000487354 H3BRM9 83 aa8.44□□□□□ -1.06
MCF2L-228ENST00000487354 ZNF22P17026 224 aaPredicted RBP8.44□□□□□ -1.06
MCF2L-228ENST00000487354 SPRR1AP35321 89 aa8.44□□□□□ -1.06
MCF2L-228ENST00000487354 KRTAP10-6P60371 365 aaPredicted RBP8.44□□□□□ -1.06
MCF2L-228ENST00000487354 RPS29P62273 56 aaKnown RBP8.44□□□□□ -1.06
MCF2L-228ENST00000487354 SMCR5Q8TEV8 140 aa8.44□□□□□ -1.06
MCF2L-228ENST00000487354 ANAPC16Q96DE5 110 aa8.43□□□□□ -1.06
MCF2L-228ENST00000487354 CFC1BP0CG36 223 aa8.42□□□□□ -1.06
MCF2L-228ENST00000487354 FLGP20930 4061 aaPredicted RBP8.42□□□□□ -1.06
MCF2L-228ENST00000487354 PRYO14603 147 aa8.4□□□□□ -1.06
MCF2L-228ENST00000487354 MT-ND4LP03901 98 aa8.4□□□□□ -1.06
MCF2L-228ENST00000487354 MOBPQ13875 183 aa8.4□□□□□ -1.06
MCF2L-228ENST00000487354 FAM19A2Q8N3H0 131 aa8.4□□□□□ -1.06
MCF2L-228ENST00000487354 NDUFA12Q9UI09 145 aa8.4□□□□□ -1.06
MCF2L-228ENST00000487354 A0A096LNJ9 63 aa8.39□□□□□ -1.07
MCF2L-228ENST00000487354 LINC01549A6NIU2 74 aa8.39□□□□□ -1.07
MCF2L-228ENST00000487354 A0A1B0GVG6 124 aa8.38□□□□□ -1.07
MCF2L-228ENST00000487354 KCNQ1DNQ9H478 68 aa8.38□□□□□ -1.07
MCF2L-228ENST00000487354 SLC25A20O43772 301 aa8.37□□□□□ -1.07
MCF2L-228ENST00000487354 ERC2-IT1O76042 136 aa8.37□□□□□ -1.07
MCF2L-228ENST00000487354 IGLV9-49A0A0B4J1Y8 123 aa8.36□□□□□ -1.07
MCF2L-228ENST00000487354 PCOTHQ58A44 107 aa8.36□□□□□ -1.07
MCF2L-228ENST00000487354 GAGE2AQ6NT46 116 aa8.36□□□□□ -1.07
MCF2L-228ENST00000487354 C11orf86A6NJI1 115 aa8.35□□□□□ -1.07
MCF2L-228ENST00000487354 SSBP3-AS1Q7Z2R9 100 aa8.35□□□□□ -1.07
MCF2L-228ENST00000487354 NCR3O14931 201 aa8.34□□□□□ -1.07
MCF2L-228ENST00000487354 A0A0U1RRA0 63 aa8.33□□□□□ -1.08
MCF2L-228ENST00000487354 LINC00158P58513 81 aa8.33□□□□□ -1.08
MCF2L-228ENST00000487354 IGLV8-61A0A075B6I0 122 aa8.32□□□□□ -1.08
MCF2L-228ENST00000487354 TRBV10-3A0A0K0K1G6 114 aa8.32□□□□□ -1.08
MCF2L-228ENST00000487354 B5MCH6 92 aa8.32□□□□□ -1.08
MCF2L-228ENST00000487354 SFTA2Q6UW10 78 aa8.32□□□□□ -1.08
MCF2L-228ENST00000487354 URB1-AS1Q96HZ7 61 aa8.32□□□□□ -1.08
MCF2L-228ENST00000487354 Q9BRP9 147 aa8.32□□□□□ -1.08
MCF2L-228ENST00000487354 ETDCA0A1B0GVM5 59 aa8.31□□□□□ -1.08
MCF2L-228ENST00000487354 BOD1L2Q8IYS8 172 aa8.31□□□□□ -1.08
MCF2L-228ENST00000487354 NDUFA6P56556 154 aa8.3□□□□□ -1.08
MCF2L-228ENST00000487354 FA2HQ7L5A8 372 aa8.3□□□□□ -1.08
MCF2L-228ENST00000487354 KRTAP9-7A8MTY7 169 aa8.29□□□□□ -1.08
MCF2L-228ENST00000487354 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.29□□□□□ -1.08
MCF2L-228ENST00000487354 SMIM13P0DJ93 91 aa8.29□□□□□ -1.08
MCF2L-228ENST00000487354 TRAV9-1A0A075B6T8 112 aa8.28□□□□□ -1.08
MCF2L-228ENST00000487354 TMEM170BQ5T4T1 132 aa8.28□□□□□ -1.08
MCF2L-228ENST00000487354 MIR7-3HGQ8N6C7 128 aa8.27□□□□□ -1.09
MCF2L-228ENST00000487354 SMCO4Q9NRQ5 59 aa8.27□□□□□ -1.09
MCF2L-228ENST00000487354 TMEM223A0PJW6 202 aa8.26□□□□□ -1.09
MCF2L-228ENST00000487354 PMCHL1Q16048 86 aa8.26□□□□□ -1.09
MCF2L-228ENST00000487354 C9orf92A6NGG3 77 aa8.25□□□□□ -1.09
MCF2L-228ENST00000487354 Q6ZRX8 168 aa8.25□□□□□ -1.09
MCF2L-228ENST00000487354 SSPOA2VEC9 5147 aa8.24□□□□□ -1.09
MCF2L-228ENST00000487354 BAGE3Q86Y29 109 aa8.24□□□□□ -1.09
MCF2L-228ENST00000487354 HBDP02042 147 aa8.23□□□□□ -1.09
MCF2L-228ENST00000487354 C9orf153Q5TBE3 101 aa8.23□□□□□ -1.09
MCF2L-228ENST00000487354 C18orf32Q8TCD1 76 aa8.21□□□□□ -1.1
MCF2L-228ENST00000487354 USH2AO75445 5202 aa8.2□□□□□ -1.1
MCF2L-228ENST00000487354 M0R2T5 61 aa8.2□□□□□ -1.1
MCF2L-228ENST00000487354 FABP9Q0Z7S8 132 aa8.2□□□□□ -1.1
MCF2L-228ENST00000487354 MEIG1Q5JSS6 88 aa8.2□□□□□ -1.1
MCF2L-228ENST00000487354 ST20-AS1Q8NBB2 130 aa8.2□□□□□ -1.1
MCF2L-228ENST00000487354 CHTOPQ9Y3Y2 248 aaKnown RBP8.2□□□□□ -1.1
MCF2L-228ENST00000487354 LOC107984156A0A0G2JMH3 177 aa8.19□□□□□ -1.1
MCF2L-228ENST00000487354 LINC00614P0C842 121 aa8.19□□□□□ -1.1
MCF2L-228ENST00000487354 DDTP30046 118 aa8.19□□□□□ -1.1
MCF2L-228ENST00000487354 ARL17AQ8IVW1 177 aa8.19□□□□□ -1.1
MCF2L-228ENST00000487354 TRBV10-2A0A0K0K1G8 114 aa8.17□□□□□ -1.1
MCF2L-228ENST00000487354 ATP6V1G1O75348 118 aa8.17□□□□□ -1.1
MCF2L-228ENST00000487354 IGLV6-57P01721 117 aa8.16□□□□□ -1.1
MCF2L-228ENST00000487354 HERV-K104P63124 156 aa8.16□□□□□ -1.1
MCF2L-228ENST00000487354 COX19Q49B96 90 aa8.16□□□□□ -1.1
MCF2L-228ENST00000487354 TSPEAR-AS2P59090 65 aa8.15□□□□□ -1.1
MCF2L-228ENST00000487354 TRAV12-1A0A0B4J245 112 aa8.14□□□□□ -1.11
MCF2L-228ENST00000487354 S100PP25815 95 aa8.14□□□□□ -1.11
MCF2L-228ENST00000487354 S100A12P80511 92 aa8.14□□□□□ -1.11
MCF2L-228ENST00000487354 HRCT1Q6UXD1 115 aa8.14□□□□□ -1.11
MCF2L-228ENST00000487354 LIMD2Q9BT23 127 aa8.14□□□□□ -1.11
MCF2L-228ENST00000487354 SEC11CQ9BY50 192 aa8.14□□□□□ -1.11
MCF2L-228ENST00000487354 TMEM218A2RU14 115 aa8.13□□□□□ -1.11
MCF2L-228ENST00000487354 SPRR1BP22528 89 aa8.13□□□□□ -1.11
MCF2L-228ENST00000487354 SPANXB1Q9NS25 103 aaPredicted RBP8.13□□□□□ -1.11
MCF2L-228ENST00000487354 RPL37P61927 97 aaKnown RBP8.12□□□□□ -1.11
MCF2L-228ENST00000487354 RPS10P5Q9NQ39 176 aa8.12□□□□□ -1.11
MCF2L-228ENST00000487354 TRAV23DV6A0A075B6W5 121 aa8.11□□□□□ -1.11
MCF2L-228ENST00000487354 COX6B2Q6YFQ2 88 aa8.11□□□□□ -1.11
MCF2L-228ENST00000487354 MYMXA0A1B0GTQ4 84 aa8.1□□□□□ -1.11
MCF2L-228ENST00000487354 LINC00587B1AMM8 73 aa8.1□□□□□ -1.11
MCF2L-228ENST00000487354 EIF4EBP3O60516 100 aaPredicted RBP8.1□□□□□ -1.11
MCF2L-228ENST00000487354 C5orf52A6NGY3 159 aa8.09□□□□□ -1.11
MCF2L-228ENST00000487354 ZNF73O43830 326 aaPredicted RBP8.09□□□□□ -1.11
MCF2L-228ENST00000487354 JOSD1Q15040 202 aaPredicted RBP8.09□□□□□ -1.11
MCF2L-228ENST00000487354 CLLU1Q5K131 121 aa8.09□□□□□ -1.11
MCF2L-228ENST00000487354 IFI27L1Q96BM0 104 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms