RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 C6orf48Q9UBA6 75 aa2.32□□□□□ -2.04
SNRNP40-205ENST00000486941 CBY1Q9Y3M2 126 aa2.32□□□□□ -2.04
SNRNP40-205ENST00000486941 TGIF2-C20orf24A0A0A6YYL0 155 aa2.31□□□□□ -2.04
SNRNP40-205ENST00000486941 A0A1B0GV90 55 aa2.31□□□□□ -2.04
SNRNP40-205ENST00000486941 A0A1B0GW15 77 aa2.31□□□□□ -2.04
SNRNP40-205ENST00000486941 ZNF727A8MUV8 499 aa2.31□□□□□ -2.04
SNRNP40-205ENST00000486941 NDUFC2-KCTD14E9PQ53 114 aa2.31□□□□□ -2.04
SNRNP40-205ENST00000486941 KRTAP4-16G5E9R7 235 aaPredicted RBP2.31□□□□□ -2.04
SNRNP40-205ENST00000486941 M0QXV9 152 aa2.31□□□□□ -2.04
SNRNP40-205ENST00000486941 ZNF861PO60384 105 aa2.31□□□□□ -2.04
SNRNP40-205ENST00000486941 RPL39P62891 51 aaKnown RBP2.31□□□□□ -2.04
SNRNP40-205ENST00000486941 HBBP68871 147 aa2.31□□□□□ -2.04
SNRNP40-205ENST00000486941 KIAA0087Q14695 138 aa2.31□□□□□ -2.04
SNRNP40-205ENST00000486941 MRPL51Q4U2R6 128 aaKnown RBP2.31□□□□□ -2.04
SNRNP40-205ENST00000486941 FAM104BQ5XKR9 115 aa2.31□□□□□ -2.04
SNRNP40-205ENST00000486941 SMIM7Q9BQ49 75 aa2.31□□□□□ -2.04
SNRNP40-205ENST00000486941 NAT8BQ9UHF3 227 aa2.31□□□□□ -2.04
SNRNP40-205ENST00000486941 V9GYV3 84 aa2.31□□□□□ -2.04
SNRNP40-205ENST00000486941 NUPR1O60356 82 aa2.3□□□□□ -2.04
SNRNP40-205ENST00000486941 TSPAN13O95857 204 aa2.3□□□□□ -2.04
SNRNP40-205ENST00000486941 SRP19P09132 144 aaKnown RBP2.3□□□□□ -2.04
SNRNP40-205ENST00000486941 LINC00614P0C842 121 aa2.3□□□□□ -2.04
SNRNP40-205ENST00000486941 ADCYAP1P18509 176 aa2.3□□□□□ -2.04
SNRNP40-205ENST00000486941 CKS2P33552 79 aa2.3□□□□□ -2.04
SNRNP40-205ENST00000486941 CEBPGP53567 150 aa2.3□□□□□ -2.04
SNRNP40-205ENST00000486941 C9orf129Q5T035 196 aaKnown RBP2.3□□□□□ -2.04
SNRNP40-205ENST00000486941 LINC00242Q5T6M2 205 aa2.3□□□□□ -2.04
SNRNP40-205ENST00000486941 UQCC3Q6UW78 93 aa2.3□□□□□ -2.04
SNRNP40-205ENST00000486941 LINC01561Q8N1V8 128 aa2.3□□□□□ -2.04
SNRNP40-205ENST00000486941 PACRGQ96M98 296 aaPredicted RBP2.3□□□□□ -2.04
SNRNP40-205ENST00000486941 SMIM2Q9BVW6 85 aa2.3□□□□□ -2.04
SNRNP40-205ENST00000486941 OCR1Q9BZK8 76 aa2.3□□□□□ -2.04
SNRNP40-205ENST00000486941 EIF5A2Q9GZV4 153 aaKnown RBP2.3□□□□□ -2.04
SNRNP40-205ENST00000486941 SMIM27A0A1W2PRY6 76 aa2.29□□□□□ -2.04
SNRNP40-205ENST00000486941 TMEM218A2RU14 115 aa2.29□□□□□ -2.04
SNRNP40-205ENST00000486941 D6R8Y8 96 aa2.29□□□□□ -2.04
SNRNP40-205ENST00000486941 PPBPP02775 128 aa2.29□□□□□ -2.04
SNRNP40-205ENST00000486941 CRYGAP11844 174 aa2.29□□□□□ -2.04
SNRNP40-205ENST00000486941 RAB5AP20339 215 aa2.29□□□□□ -2.04
SNRNP40-205ENST00000486941 IFI27P40305 119 aaPredicted RBP2.29□□□□□ -2.04
SNRNP40-205ENST00000486941 RPL28P46779 137 aaKnown RBP2.29□□□□□ -2.04
SNRNP40-205ENST00000486941 PYY3Q5JQD4 70 aa2.29□□□□□ -2.04
SNRNP40-205ENST00000486941 C2orf82Q6UX34 121 aa2.29□□□□□ -2.04
SNRNP40-205ENST00000486941 ALKAL2Q6UX46 152 aa2.29□□□□□ -2.04
SNRNP40-205ENST00000486941 TMEM141Q96I45 108 aa2.29□□□□□ -2.04
SNRNP40-205ENST00000486941 TP73-AS1Q9UF72 201 aa2.29□□□□□ -2.04
SNRNP40-205ENST00000486941 C22orf24Q9Y442 160 aa2.29□□□□□ -2.04
SNRNP40-205ENST00000486941 FAT4Q6V0I7 4981 aa2.29□□□□□ -2.04
SNRNP40-205ENST00000486941 NPYP01303 97 aa2.28□□□□□ -2.04
SNRNP40-205ENST00000486941 AKR1D1P51857 326 aa2.28□□□□□ -2.04
SNRNP40-205ENST00000486941 CKS1BP61024 79 aa2.28□□□□□ -2.04
SNRNP40-205ENST00000486941 RPL23P62829 140 aaKnown RBP2.28□□□□□ -2.04
SNRNP40-205ENST00000486941 C6orf226Q5I0X4 101 aa2.28□□□□□ -2.04
SNRNP40-205ENST00000486941 Q6ZN92 141 aa2.28□□□□□ -2.04
SNRNP40-205ENST00000486941 TEX43Q6ZNM6 134 aa2.28□□□□□ -2.04
SNRNP40-205ENST00000486941 TMEM136Q6ZRR5 245 aa2.28□□□□□ -2.04
SNRNP40-205ENST00000486941 AMELXQ99217 191 aa2.28□□□□□ -2.04
SNRNP40-205ENST00000486941 NAT8Q9UHE5 227 aa2.28□□□□□ -2.04
SNRNP40-205ENST00000486941 A0A1B0GXF2 115 aa2.27□□□□□ -2.05
SNRNP40-205ENST00000486941 DLEU1O43261 78 aa2.27□□□□□ -2.05
SNRNP40-205ENST00000486941 BCE1O60756 84 aa2.27□□□□□ -2.05
SNRNP40-205ENST00000486941 DDTP30046 118 aa2.27□□□□□ -2.05
SNRNP40-205ENST00000486941 SEC11AP67812 179 aa2.27□□□□□ -2.05
SNRNP40-205ENST00000486941 ADIRFQ15847 76 aa2.27□□□□□ -2.05
SNRNP40-205ENST00000486941 FAM229BQ4G0N7 80 aa2.27□□□□□ -2.05
SNRNP40-205ENST00000486941 MRPL54Q6P161 138 aaKnown RBP2.27□□□□□ -2.05
SNRNP40-205ENST00000486941 C2orf66Q6UXQ4 117 aa2.27□□□□□ -2.05
SNRNP40-205ENST00000486941 FAM19A3Q7Z5A8 133 aa2.27□□□□□ -2.05
SNRNP40-205ENST00000486941 MRPL55Q7Z7F7 128 aaKnown RBP2.27□□□□□ -2.05
SNRNP40-205ENST00000486941 CBLN2Q8IUK8 224 aa2.27□□□□□ -2.05
SNRNP40-205ENST00000486941 Q8IZM0 81 aa2.27□□□□□ -2.05
SNRNP40-205ENST00000486941 ORMDL3Q8N138 153 aa2.27□□□□□ -2.05
SNRNP40-205ENST00000486941 PRELID3AQ96N28 172 aa2.27□□□□□ -2.05
SNRNP40-205ENST00000486941 ALKBH7Q9BT30 221 aaPredicted RBP2.27□□□□□ -2.05
SNRNP40-205ENST00000486941 SEC11CQ9BY50 192 aa2.27□□□□□ -2.05
SNRNP40-205ENST00000486941 VCX2Q9H322 139 aa2.27□□□□□ -2.05
SNRNP40-205ENST00000486941 XAGE1AQ9HD64 81 aa2.27□□□□□ -2.05
SNRNP40-205ENST00000486941 LAMTOR2Q9Y2Q5 125 aa2.27□□□□□ -2.05
SNRNP40-205ENST00000486941 IGIPA6NJ69 53 aa2.26□□□□□ -2.05
SNRNP40-205ENST00000486941 HSBP1L1C9JCN9 74 aa2.26□□□□□ -2.05
SNRNP40-205ENST00000486941 F8VRH5 84 aa2.26□□□□□ -2.05
SNRNP40-205ENST00000486941 K7EMI3 77 aa2.26□□□□□ -2.05
SNRNP40-205ENST00000486941 APOC3P02656 99 aa2.26□□□□□ -2.05
SNRNP40-205ENST00000486941 MT-ND4LP03901 98 aa2.26□□□□□ -2.05
SNRNP40-205ENST00000486941 CXCL5P42830 114 aa2.26□□□□□ -2.05
SNRNP40-205ENST00000486941 HERVK_113P63121 156 aa2.26□□□□□ -2.05
SNRNP40-205ENST00000486941 TPRXLQ17RH7 258 aa2.26□□□□□ -2.05
SNRNP40-205ENST00000486941 KRTAP13-2Q52LG2 175 aa2.26□□□□□ -2.05
SNRNP40-205ENST00000486941 ORMDL2Q53FV1 153 aa2.26□□□□□ -2.05
SNRNP40-205ENST00000486941 LINC00173Q6ZV60 143 aa2.26□□□□□ -2.05
SNRNP40-205ENST00000486941 ATP5L2Q7Z4Y8 100 aa2.26□□□□□ -2.05
SNRNP40-205ENST00000486941 KRTAP13-1Q8IUC0 172 aa2.26□□□□□ -2.05
SNRNP40-205ENST00000486941 SVBPQ8N300 66 aa2.26□□□□□ -2.05
SNRNP40-205ENST00000486941 Q8N8P6 123 aa2.26□□□□□ -2.05
SNRNP40-205ENST00000486941 TOMM7Q9P0U1 55 aa2.26□□□□□ -2.05
SNRNP40-205ENST00000486941 CYSLTR1Q9Y271 337 aa2.26□□□□□ -2.05
SNRNP40-205ENST00000486941 LOC389332A0A1B0GUA5 103 aa2.25□□□□□ -2.05
SNRNP40-205ENST00000486941 C9JQL5 133 aa2.25□□□□□ -2.05
SNRNP40-205ENST00000486941 G0S2P27469 103 aa2.25□□□□□ -2.05
SNRNP40-205ENST00000486941 RAB5BP61020 215 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms