RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, human

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM39A-208	ENST00000486159		Q9HAA7	133 aa		6.21	□□□□□ -1.42
TMEM39A-208	ENST00000486159	PRO1854	Q9UHT4	67 aa		6.21	□□□□□ -1.42
TMEM39A-208	ENST00000486159	SRRM2	Q9UQ35	2752 aa	Known RBP	6.21	□□□□□ -1.42
TMEM39A-208	ENST00000486159		A4D1N5	150 aa		6.2	□□□□□ -1.42
TMEM39A-208	ENST00000486159	GAGE10	A6NGK3	116 aa		6.2	□□□□□ -1.42
TMEM39A-208	ENST00000486159	IBA57-AS1	B1ANH7	110 aa		6.2	□□□□□ -1.42
TMEM39A-208	ENST00000486159	APOM	O95445	188 aa		6.2	□□□□□ -1.42
TMEM39A-208	ENST00000486159	PRSS2	P07478	247 aa		6.2	□□□□□ -1.42
TMEM39A-208	ENST00000486159	XCL1	P47992	114 aa		6.2	□□□□□ -1.42
TMEM39A-208	ENST00000486159	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	6.2	□□□□□ -1.42
TMEM39A-208	ENST00000486159		K7EP34	96 aa		6.19	□□□□□ -1.42
TMEM39A-208	ENST00000486159		K7ERJ3	54 aa		6.19	□□□□□ -1.42
TMEM39A-208	ENST00000486159	CRP	P02741	224 aa		6.19	□□□□□ -1.42
TMEM39A-208	ENST00000486159	CFC1B	P0CG36	223 aa		6.19	□□□□□ -1.42
TMEM39A-208	ENST00000486159	CFC1	P0CG37	223 aa		6.19	□□□□□ -1.42
TMEM39A-208	ENST00000486159	C6orf226	Q5I0X4	101 aa		6.19	□□□□□ -1.42
TMEM39A-208	ENST00000486159	MEIG1	Q5JSS6	88 aa		6.19	□□□□□ -1.42
TMEM39A-208	ENST00000486159	ADAMTSL4-AS1	Q5T5F5	129 aa		6.19	□□□□□ -1.42
TMEM39A-208	ENST00000486159	C5orf38	Q86SI9	138 aa		6.19	□□□□□ -1.42
TMEM39A-208	ENST00000486159	IGLV5-52	A0A0A0MRZ9	124 aa		6.18	□□□□□ -1.42
TMEM39A-208	ENST00000486159	LECT2	O14960	151 aa		6.18	□□□□□ -1.42
TMEM39A-208	ENST00000486159	MAL	P21145	153 aa		6.18	□□□□□ -1.42
TMEM39A-208	ENST00000486159	LINC01556	Q5JQF7	62 aa		6.18	□□□□□ -1.42
TMEM39A-208	ENST00000486159	TOMM7	Q9P0U1	55 aa		6.18	□□□□□ -1.42
TMEM39A-208	ENST00000486159	SPCS1	Q9Y6A9	102 aa		6.18	□□□□□ -1.42
TMEM39A-208	ENST00000486159	PSCA	O43653	123 aa		6.17	□□□□□ -1.42
TMEM39A-208	ENST00000486159	FOXI1	Q12951	378 aa		6.17	□□□□□ -1.42
TMEM39A-208	ENST00000486159	COX17	Q14061	63 aa		6.17	□□□□□ -1.42
TMEM39A-208	ENST00000486159	LINC01620	Q4KN68	170 aa		6.17	□□□□□ -1.42
TMEM39A-208	ENST00000486159	CFAP161	Q6P656	301 aa		6.17	□□□□□ -1.42
TMEM39A-208	ENST00000486159		Q8N814	137 aa		6.17	□□□□□ -1.42
TMEM39A-208	ENST00000486159	LINC00308	Q8TCZ7	52 aa		6.17	□□□□□ -1.42
TMEM39A-208	ENST00000486159	KLK12	Q9UKR0	248 aa		6.17	□□□□□ -1.42
TMEM39A-208	ENST00000486159	ERG28	Q9UKR5	140 aa		6.17	□□□□□ -1.42
TMEM39A-208	ENST00000486159	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	6.17	□□□□□ -1.42
TMEM39A-208	ENST00000486159	TRBV20-1	A0A075B6N2	111 aa		6.16	□□□□□ -1.42
TMEM39A-208	ENST00000486159		F8WDY8	70 aa		6.16	□□□□□ -1.42
TMEM39A-208	ENST00000486159	TSPAN13	O95857	204 aa		6.16	□□□□□ -1.42
TMEM39A-208	ENST00000486159	CKS1B	P61024	79 aa		6.16	□□□□□ -1.42
TMEM39A-208	ENST00000486159	CLPSL2	Q6UWE3	100 aa		6.16	□□□□□ -1.42
TMEM39A-208	ENST00000486159	ENHO	Q6UWT2	76 aa		6.16	□□□□□ -1.42
TMEM39A-208	ENST00000486159	GAGE12H	A6NDE8	117 aa		6.15	□□□□□ -1.42
TMEM39A-208	ENST00000486159	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	6.14	□□□□□ -1.43
TMEM39A-208	ENST00000486159	LOC107984156	A0A0G2JMH3	177 aa		6.14	□□□□□ -1.43
TMEM39A-208	ENST00000486159	TRBV30	A0A0K0K1B3	111 aa		6.14	□□□□□ -1.43
TMEM39A-208	ENST00000486159	KIAA0087	Q14695	138 aa		6.14	□□□□□ -1.43
TMEM39A-208	ENST00000486159	ARL17A	Q8IVW1	177 aa		6.14	□□□□□ -1.43
TMEM39A-208	ENST00000486159	UBE2W	Q96B02	151 aa		6.14	□□□□□ -1.43
TMEM39A-208	ENST00000486159	FLG2	Q5D862	2391 aa	Predicted RBP	6.14	□□□□□ -1.43
TMEM39A-208	ENST00000486159	IGLV10-54	A0A075B6I4	117 aa		6.13	□□□□□ -1.43
TMEM39A-208	ENST00000486159	COX6C	P09669	75 aa		6.13	□□□□□ -1.43
TMEM39A-208	ENST00000486159	LINC00158	P58513	81 aa		6.13	□□□□□ -1.43
TMEM39A-208	ENST00000486159	NAA38	Q9BRA0	125 aa	Known RBP	6.13	□□□□□ -1.43
TMEM39A-208	ENST00000486159	LRP1	Q07954	4544 aa	Known RBP	6.13	□□□□□ -1.43
TMEM39A-208	ENST00000486159	GVQW2	A0A096LPI5	108 aa	Predicted RBP	6.12	□□□□□ -1.43
TMEM39A-208	ENST00000486159	TRAV13-2	A0A0B4J235	113 aa		6.12	□□□□□ -1.43
TMEM39A-208	ENST00000486159		F8W1H4	67 aa		6.12	□□□□□ -1.43
TMEM39A-208	ENST00000486159	SPAG11B	Q08648	103 aa		6.12	□□□□□ -1.43
TMEM39A-208	ENST00000486159	MIR7-3HG	Q8N6C7	128 aa		6.12	□□□□□ -1.43
TMEM39A-208	ENST00000486159	RMI2	Q96E14	147 aa		6.12	□□□□□ -1.43
TMEM39A-208	ENST00000486159	C1orf43	Q9BWL3	253 aa		6.12	□□□□□ -1.43
TMEM39A-208	ENST00000486159	FAT3	Q8TDW7	4589 aa		6.11	□□□□□ -1.43
TMEM39A-208	ENST00000486159	SCGB1C2	P0DMR2	95 aa		6.11	□□□□□ -1.43
TMEM39A-208	ENST00000486159	PSMB2	P49721	201 aa		6.11	□□□□□ -1.43
TMEM39A-208	ENST00000486159		Q1RN00	199 aa		6.11	□□□□□ -1.43
TMEM39A-208	ENST00000486159	DAND5	Q8N907	189 aa		6.11	□□□□□ -1.43
TMEM39A-208	ENST00000486159	NTN5	Q8WTR8	489 aa	Predicted RBP	6.11	□□□□□ -1.43
TMEM39A-208	ENST00000486159	HMCN2	Q8NDA2	5059 aa		6.11	□□□□□ -1.43
TMEM39A-208	ENST00000486159	KRTAP26-1	Q6PEX3	210 aa		6.1	□□□□□ -1.43
TMEM39A-208	ENST00000486159	SOSTDC1	Q6X4U4	206 aa		6.1	□□□□□ -1.43
TMEM39A-208	ENST00000486159		Q6ZSA8	131 aa		6.1	□□□□□ -1.43
TMEM39A-208	ENST00000486159	C2orf48	Q96LS8	159 aa		6.1	□□□□□ -1.43
TMEM39A-208	ENST00000486159	SND1-IT1	Q9HBX3	110 aa		6.1	□□□□□ -1.43
TMEM39A-208	ENST00000486159		A0A0U1RRA0	63 aa		6.09	□□□□□ -1.43
TMEM39A-208	ENST00000486159	NDUFC2	O95298	119 aa		6.09	□□□□□ -1.43
TMEM39A-208	ENST00000486159	PFN2	P35080	140 aa		6.09	□□□□□ -1.43
TMEM39A-208	ENST00000486159	RPL13A	P40429	203 aa	Known RBP	6.09	□□□□□ -1.43
TMEM39A-208	ENST00000486159	NPC2	P61916	151 aa		6.09	□□□□□ -1.43
TMEM39A-208	ENST00000486159	ZNF561-AS1	K7EIQ3	104 aa		6.08	□□□□□ -1.44
TMEM39A-208	ENST00000486159		M0QXV9	152 aa		6.08	□□□□□ -1.44
TMEM39A-208	ENST00000486159	KRTAP10-4	P60372	401 aa	Predicted RBP	6.08	□□□□□ -1.44
TMEM39A-208	ENST00000486159	ATXN8	Q156A1	80 aa		6.08	□□□□□ -1.44
TMEM39A-208	ENST00000486159	C2orf82	Q6UX34	121 aa		6.08	□□□□□ -1.44
TMEM39A-208	ENST00000486159	SCX	Q7RTU7	201 aa		6.08	□□□□□ -1.44
TMEM39A-208	ENST00000486159	PKHD1L1	Q86WI1	4243 aa		6.07	□□□□□ -1.44
TMEM39A-208	ENST00000486159	RNF213	Q63HN8	5207 aa		6.07	□□□□□ -1.44
TMEM39A-208	ENST00000486159	IGKV2D-24	A0A075B6R9	120 aa		6.07	□□□□□ -1.44
TMEM39A-208	ENST00000486159		H3BMG7	143 aa		6.07	□□□□□ -1.44
TMEM39A-208	ENST00000486159		H7C2G1	150 aa		6.07	□□□□□ -1.44
TMEM39A-208	ENST00000486159	TRIAP1	O43715	76 aa		6.06	□□□□□ -1.44
TMEM39A-208	ENST00000486159	TCL1B	O95988	128 aa		6.06	□□□□□ -1.44
TMEM39A-208	ENST00000486159	RPL28	P46779	137 aa	Known RBP	6.06	□□□□□ -1.44
TMEM39A-208	ENST00000486159	LINC01600	Q96MT4	127 aa		6.06	□□□□□ -1.44
TMEM39A-208	ENST00000486159	RNF151	Q2KHN1	245 aa		6.05	□□□□□ -1.44
TMEM39A-208	ENST00000486159	UNQ6190/PRO20217	Q6UXQ8	127 aa		6.05	□□□□□ -1.44
TMEM39A-208	ENST00000486159	CIRBP-AS1	Q8TBR5	109 aa		6.05	□□□□□ -1.44
TMEM39A-208	ENST00000486159	CAMK2N2	Q96S95	79 aa		6.05	□□□□□ -1.44
TMEM39A-208	ENST00000486159	PRO0461	Q9UI25	63 aa		6.05	□□□□□ -1.44
TMEM39A-208	ENST00000486159	IGKV2-28	A0A075B6P5	120 aa		6.04	□□□□□ -1.44
TMEM39A-208	ENST00000486159	KRTAP29-1	A8MX34	341 aa	Predicted RBP	6.04	□□□□□ -1.44

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