RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 LEPROTO15243 131 aa7.37□□□□□ -1.23
HLA-DOA-204ENST00000485901 LINC00158P58513 81 aa7.37□□□□□ -1.23
HLA-DOA-204ENST00000485901 HERV-K104P63124 156 aa7.37□□□□□ -1.23
HLA-DOA-204ENST00000485901 PLEKHB2Q96CS7 222 aa7.37□□□□□ -1.23
HLA-DOA-204ENST00000485901 MYMXA0A1B0GTQ4 84 aa7.36□□□□□ -1.23
HLA-DOA-204ENST00000485901 REG3GQ6UW15 175 aa7.36□□□□□ -1.23
HLA-DOA-204ENST00000485901 PET117Q6UWS5 81 aa7.36□□□□□ -1.23
HLA-DOA-204ENST00000485901 MRPL55Q7Z7F7 128 aaKnown RBP7.36□□□□□ -1.23
HLA-DOA-204ENST00000485901 SND1-IT1Q9HBX3 110 aa7.36□□□□□ -1.23
HLA-DOA-204ENST00000485901 NDUFA12Q9UI09 145 aa7.36□□□□□ -1.23
HLA-DOA-204ENST00000485901 KRTAP10-8P60410 259 aa7.35□□□□□ -1.23
HLA-DOA-204ENST00000485901 KRTAP11-1Q8IUC1 163 aa7.35□□□□□ -1.23
HLA-DOA-204ENST00000485901 RNF213Q63HN8 5207 aa7.35□□□□□ -1.23
HLA-DOA-204ENST00000485901 IGLV5-37A0A075B6J1 123 aa7.34□□□□□ -1.23
HLA-DOA-204ENST00000485901 J3QQQ9 107 aa7.34□□□□□ -1.23
HLA-DOA-204ENST00000485901 IGLV7-43P04211 117 aa7.34□□□□□ -1.23
HLA-DOA-204ENST00000485901 RPL24P83731 157 aaKnown RBP7.34□□□□□ -1.23
HLA-DOA-204ENST00000485901 MEIG1Q5JSS6 88 aa7.34□□□□□ -1.23
HLA-DOA-204ENST00000485901 NKAPP1Q8N9T2 125 aa7.34□□□□□ -1.23
HLA-DOA-204ENST00000485901 A0A0U1RRA0 63 aa7.33□□□□□ -1.24
HLA-DOA-204ENST00000485901 C3orf79P0CE67 100 aa7.33□□□□□ -1.24
HLA-DOA-204ENST00000485901 LGALS3P17931 250 aaKnown RBP7.33□□□□□ -1.24
HLA-DOA-204ENST00000485901 NMUP48645 174 aa7.33□□□□□ -1.24
HLA-DOA-204ENST00000485901 LINC01545Q5VT33 79 aa7.33□□□□□ -1.24
HLA-DOA-204ENST00000485901 LINC00167Q96N53 147 aa7.33□□□□□ -1.24
HLA-DOA-204ENST00000485901 E9PLD3 99 aa7.32□□□□□ -1.24
HLA-DOA-204ENST00000485901 SMIM13P0DJ93 91 aa7.32□□□□□ -1.24
HLA-DOA-204ENST00000485901 KRTDAPP60985 99 aa7.32□□□□□ -1.24
HLA-DOA-204ENST00000485901 GAGE10A6NGK3 116 aa7.31□□□□□ -1.24
HLA-DOA-204ENST00000485901 RPL37AP8A6NKH3 93 aa7.31□□□□□ -1.24
HLA-DOA-204ENST00000485901 VPREB1P12018 145 aa7.31□□□□□ -1.24
HLA-DOA-204ENST00000485901 TSPEAR-AS2P59090 65 aa7.31□□□□□ -1.24
HLA-DOA-204ENST00000485901 DIRC1Q969H9 104 aa7.31□□□□□ -1.24
HLA-DOA-204ENST00000485901 C20orf202A1L168 122 aa7.3□□□□□ -1.24
HLA-DOA-204ENST00000485901 MIR7-3HGQ8N6C7 128 aa7.3□□□□□ -1.24
HLA-DOA-204ENST00000485901 S100A6P06703 90 aa7.29□□□□□ -1.24
HLA-DOA-204ENST00000485901 ZNF861PO60384 105 aa7.28□□□□□ -1.24
HLA-DOA-204ENST00000485901 S100A2P29034 98 aa7.28□□□□□ -1.24
HLA-DOA-204ENST00000485901 AKR1D1P51857 326 aa7.28□□□□□ -1.24
HLA-DOA-204ENST00000485901 IGLV1-50A0A075B6I6 118 aa7.27□□□□□ -1.25
HLA-DOA-204ENST00000485901 H0Y9J4 135 aa7.27□□□□□ -1.25
HLA-DOA-204ENST00000485901 BCE1O60756 84 aa7.27□□□□□ -1.25
HLA-DOA-204ENST00000485901 BOD1L2Q8IYS8 172 aa7.27□□□□□ -1.25
HLA-DOA-204ENST00000485901 IGKV2-28A0A075B6P5 120 aa7.26□□□□□ -1.25
HLA-DOA-204ENST00000485901 M0R378 163 aa7.26□□□□□ -1.25
HLA-DOA-204ENST00000485901 IGKV2D-28P01615 120 aa7.26□□□□□ -1.25
HLA-DOA-204ENST00000485901 RPL28P46779 137 aaKnown RBP7.26□□□□□ -1.25
HLA-DOA-204ENST00000485901 HIST3H2BBQ8N257 126 aa7.26□□□□□ -1.25
HLA-DOA-204ENST00000485901 Q8NDZ9 215 aa7.26□□□□□ -1.25
HLA-DOA-204ENST00000485901 LOC107984156A0A0G2JMH3 177 aa7.25□□□□□ -1.25
HLA-DOA-204ENST00000485901 A0A0J9YXY3 114 aa7.25□□□□□ -1.25
HLA-DOA-204ENST00000485901 ARL17AQ8IVW1 177 aa7.25□□□□□ -1.25
HLA-DOA-204ENST00000485901 IGKV2D-26A0A0A0MRZ7 120 aa7.24□□□□□ -1.25
HLA-DOA-204ENST00000485901 DAND5Q8N907 189 aa7.24□□□□□ -1.25
HLA-DOA-204ENST00000485901 HIST1H2BLQ99880 126 aa7.24□□□□□ -1.25
HLA-DOA-204ENST00000485901 MIEN1Q9BRT3 115 aa7.24□□□□□ -1.25
HLA-DOA-204ENST00000485901 UBE2AP49459 152 aa7.23□□□□□ -1.25
HLA-DOA-204ENST00000485901 ZNF815PA8K554 130 aa7.22□□□□□ -1.25
HLA-DOA-204ENST00000485901 SNRPEP62304 92 aaKnown RBP7.22□□□□□ -1.25
HLA-DOA-204ENST00000485901 ADAMTSL4-AS1Q5T5F5 129 aa7.22□□□□□ -1.25
HLA-DOA-204ENST00000485901 TMEM126AQ9H061 195 aa7.22□□□□□ -1.25
HLA-DOA-204ENST00000485901 TMEM238C9JI98 176 aa7.21□□□□□ -1.26
HLA-DOA-204ENST00000485901 NCR3O14931 201 aa7.21□□□□□ -1.26
HLA-DOA-204ENST00000485901 TIMM17BO60830 172 aa7.21□□□□□ -1.26
HLA-DOA-204ENST00000485901 ATOH7Q8N100 152 aa7.21□□□□□ -1.26
HLA-DOA-204ENST00000485901 TRBV10-2A0A0K0K1G8 114 aa7.2□□□□□ -1.26
HLA-DOA-204ENST00000485901 NDUFC2O95298 119 aa7.2□□□□□ -1.26
HLA-DOA-204ENST00000485901 S100A12P80511 92 aa7.2□□□□□ -1.26
HLA-DOA-204ENST00000485901 FAM19A1Q7Z5A9 133 aa7.2□□□□□ -1.26
HLA-DOA-204ENST00000485901 ANKRD39Q53RE8 183 aa7.19□□□□□ -1.26
HLA-DOA-204ENST00000485901 KRTAP13-1Q8IUC0 172 aa7.19□□□□□ -1.26
HLA-DOA-204ENST00000485901 TTTY13Q9BZ97 58 aa7.19□□□□□ -1.26
HLA-DOA-204ENST00000485901 KCNQ1DNQ9H478 68 aa7.19□□□□□ -1.26
HLA-DOA-204ENST00000485901 C5orf52A6NGY3 159 aa7.18□□□□□ -1.26
HLA-DOA-204ENST00000485901 PRYO14603 147 aa7.18□□□□□ -1.26
HLA-DOA-204ENST00000485901 KRTAP1-4P0C5Y4 121 aa7.18□□□□□ -1.26
HLA-DOA-204ENST00000485901 LITAFQ99732 161 aa7.18□□□□□ -1.26
HLA-DOA-204ENST00000485901 SPANXB1Q9NS25 103 aaPredicted RBP7.18□□□□□ -1.26
HLA-DOA-204ENST00000485901 TRBV10-3A0A0K0K1G6 114 aa7.17□□□□□ -1.26
HLA-DOA-204ENST00000485901 HSBP1L1C9JCN9 74 aa7.17□□□□□ -1.26
HLA-DOA-204ENST00000485901 NPC2P61916 151 aa7.17□□□□□ -1.26
HLA-DOA-204ENST00000485901 PRLHP81277 87 aa7.17□□□□□ -1.26
HLA-DOA-204ENST00000485901 SOSTDC1Q6X4U4 206 aa7.17□□□□□ -1.26
HLA-DOA-204ENST00000485901 SCGB1D4Q6XE38 83 aa7.17□□□□□ -1.26
HLA-DOA-204ENST00000485901 PRR26Q8N8Z3 221 aa7.17□□□□□ -1.26
HLA-DOA-204ENST00000485901 LINC00308Q8TCZ7 52 aa7.17□□□□□ -1.26
HLA-DOA-204ENST00000485901 DDTP30046 118 aa7.16□□□□□ -1.26
HLA-DOA-204ENST00000485901 S100A7L2Q5SY68 101 aa7.16□□□□□ -1.26
HLA-DOA-204ENST00000485901 LPAP08519 4548 aa7.16□□□□□ -1.26
HLA-DOA-204ENST00000485901 EIF4EBP3O60516 100 aaPredicted RBP7.15□□□□□ -1.26
HLA-DOA-204ENST00000485901 SCGB1D1O95968 90 aa7.15□□□□□ -1.26
HLA-DOA-204ENST00000485901 SPRR1AP35321 89 aa7.15□□□□□ -1.26
HLA-DOA-204ENST00000485901 RPL13AP40429 203 aaKnown RBP7.15□□□□□ -1.26
HLA-DOA-204ENST00000485901 LINC00337Q8N6G1 96 aa7.15□□□□□ -1.26
HLA-DOA-204ENST00000485901 COPS9Q8WXC6 57 aa7.15□□□□□ -1.26
HLA-DOA-204ENST00000485901 SPANXCQ9NY87 97 aa7.15□□□□□ -1.26
HLA-DOA-204ENST00000485901 A0A0U1RQV1 116 aa7.14□□□□□ -1.27
HLA-DOA-204ENST00000485901 ETDCA0A1B0GVM5 59 aa7.14□□□□□ -1.27
HLA-DOA-204ENST00000485901 PCP2Q8IVA1 136 aa7.14□□□□□ -1.27
HLA-DOA-204ENST00000485901 CBY1Q9Y3M2 126 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms