RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 APOBP04114 4563 aaKnown RBP10.02□□□□□ -0.81
APOE-205ENST00000485628 A0A0U1RRA0 63 aa10.01□□□□□ -0.81
APOE-205ENST00000485628 SOSTDC1Q6X4U4 206 aa10.01□□□□□ -0.81
APOE-205ENST00000485628 SCGB1D4Q6XE38 83 aa10.01□□□□□ -0.81
APOE-205ENST00000485628 XAGE1AQ9HD64 81 aa10.01□□□□□ -0.81
APOE-205ENST00000485628 PLAC8Q9NZF1 115 aa10.01□□□□□ -0.81
APOE-205ENST00000485628 IGKV2-24A0A0C4DH68 120 aa10□□□□□ -0.81
APOE-205ENST00000485628 A0A1W2PNN7 141 aa10□□□□□ -0.81
APOE-205ENST00000485628 XGP55808 180 aa10□□□□□ -0.81
APOE-205ENST00000485628 Q6ZVH6 145 aa10□□□□□ -0.81
APOE-205ENST00000485628 DAND5Q8N907 189 aa10□□□□□ -0.81
APOE-205ENST00000485628 Q8NDZ9 215 aa10□□□□□ -0.81
APOE-205ENST00000485628 A0A087WYN8 130 aa9.99□□□□□ -0.81
APOE-205ENST00000485628 IGLV5-37A0A075B6J1 123 aa9.98□□□□□ -0.81
APOE-205ENST00000485628 TMEM238C9JI98 176 aa9.98□□□□□ -0.81
APOE-205ENST00000485628 CIRBP-AS1Q8TBR5 109 aa9.98□□□□□ -0.81
APOE-205ENST00000485628 LINC00308Q8TCZ7 52 aa9.98□□□□□ -0.81
APOE-205ENST00000485628 FAM168BA1KXE4 195 aa9.97□□□□□ -0.81
APOE-205ENST00000485628 VPREB1P12018 145 aa9.97□□□□□ -0.81
APOE-205ENST00000485628 SERTAD4-AS1Q5TG53 156 aa9.97□□□□□ -0.81
APOE-205ENST00000485628 UQCR10Q9UDW1 63 aa9.97□□□□□ -0.81
APOE-205ENST00000485628 IFITM1P13164 125 aa9.96□□□□□ -0.82
APOE-205ENST00000485628 SCXQ7RTU7 201 aa9.96□□□□□ -0.82
APOE-205ENST00000485628 CDK2AP2O75956 126 aa9.95□□□□□ -0.82
APOE-205ENST00000485628 MIEN1Q9BRT3 115 aa9.95□□□□□ -0.82
APOE-205ENST00000485628 NDUFC2O95298 119 aa9.94□□□□□ -0.82
APOE-205ENST00000485628 MUSTN1Q8IVN3 82 aa9.93□□□□□ -0.82
APOE-205ENST00000485628 PRO1933Q9H354 126 aa9.93□□□□□ -0.82
APOE-205ENST00000485628 TAL2Q16559 108 aa9.92□□□□□ -0.82
APOE-205ENST00000485628 C22orf24Q9Y442 160 aa9.91□□□□□ -0.82
APOE-205ENST00000485628 HSPG2P98160 4391 aa9.9□□□□□ -0.82
APOE-205ENST00000485628 RPL24P83731 157 aaKnown RBP9.9□□□□□ -0.82
APOE-205ENST00000485628 SRSF9Q13242 221 aaKnown RBP eCLIP9.9□□□□□ -0.82
APOE-205ENST00000485628 BIRC6Q9NR09 4857 aa9.9□□□□□ -0.83
APOE-205ENST00000485628 RYR1P21817 5038 aa9.89□□□□□ -0.83
APOE-205ENST00000485628 IGKV2-28A0A075B6P5 120 aa9.89□□□□□ -0.83
APOE-205ENST00000485628 IGKV2D-28P01615 120 aa9.89□□□□□ -0.83
APOE-205ENST00000485628 NPC2P61916 151 aa9.89□□□□□ -0.83
APOE-205ENST00000485628 PRR3P79522 188 aaKnown RBP9.89□□□□□ -0.83
APOE-205ENST00000485628 FAM19A5Q7Z5A7 132 aaPredicted RBP9.89□□□□□ -0.83
APOE-205ENST00000485628 COPS9Q8WXC6 57 aa9.89□□□□□ -0.83
APOE-205ENST00000485628 DPH3Q96FX2 82 aa9.89□□□□□ -0.83
APOE-205ENST00000485628 TRBV10-2A0A0K0K1G8 114 aa9.88□□□□□ -0.83
APOE-205ENST00000485628 HAMPP81172 84 aa9.88□□□□□ -0.83
APOE-205ENST00000485628 HIST1H4GQ99525 98 aa9.88□□□□□ -0.83
APOE-205ENST00000485628 KIAA1109Q2LD37 5005 aa9.87□□□□□ -0.83
APOE-205ENST00000485628 M0QXV9 152 aa9.87□□□□□ -0.83
APOE-205ENST00000485628 PHF5AQ7RTV0 110 aaKnown RBP9.87□□□□□ -0.83
APOE-205ENST00000485628 MRPL55Q7Z7F7 128 aaKnown RBP9.87□□□□□ -0.83
APOE-205ENST00000485628 KRTAP11-1Q8IUC1 163 aa9.87□□□□□ -0.83
APOE-205ENST00000485628 TSTD3H0UI37 97 aa9.86□□□□□ -0.83
APOE-205ENST00000485628 M0R378 163 aa9.86□□□□□ -0.83
APOE-205ENST00000485628 CEND1Q8N111 149 aa9.86□□□□□ -0.83
APOE-205ENST00000485628 C7orf33Q8WU49 177 aa9.86□□□□□ -0.83
APOE-205ENST00000485628 LINC00167Q96N53 147 aa9.86□□□□□ -0.83
APOE-205ENST00000485628 HSD52Q0P140 79 aa9.85□□□□□ -0.83
APOE-205ENST00000485628 IGLV1-50A0A075B6I6 118 aa9.84□□□□□ -0.83
APOE-205ENST00000485628 A4D1N5 150 aa9.84□□□□□ -0.83
APOE-205ENST00000485628 HNRNPA3P51991 378 aaKnown RBP9.84□□□□□ -0.83
APOE-205ENST00000485628 KRTAP17-1Q9BYP8 105 aa9.84□□□□□ -0.83
APOE-205ENST00000485628 IGLV6-57P01721 117 aa9.83□□□□□ -0.84
APOE-205ENST00000485628 LBHQ53QV2 105 aaPredicted RBP9.83□□□□□ -0.84
APOE-205ENST00000485628 LINC00337Q8N6G1 96 aa9.83□□□□□ -0.84
APOE-205ENST00000485628 NKAPP1Q8N9T2 125 aa9.83□□□□□ -0.84
APOE-205ENST00000485628 NCR3O14931 201 aa9.82□□□□□ -0.84
APOE-205ENST00000485628 FXYD2P54710 66 aa9.82□□□□□ -0.84
APOE-205ENST00000485628 FAT1Q14517 4588 aa9.82□□□□□ -0.84
APOE-205ENST00000485628 VPS13BQ7Z7G8 4022 aa9.82□□□□□ -0.84
APOE-205ENST00000485628 CFC1BP0CG36 223 aa9.8□□□□□ -0.84
APOE-205ENST00000485628 CFC1P0CG37 223 aa9.8□□□□□ -0.84
APOE-205ENST00000485628 DDTP30046 118 aa9.8□□□□□ -0.84
APOE-205ENST00000485628 KRTAP10-4P60372 401 aaPredicted RBP9.8□□□□□ -0.84
APOE-205ENST00000485628 CTAG1AP78358 180 aa9.8□□□□□ -0.84
APOE-205ENST00000485628 KCNQ1DNQ9H478 68 aa9.8□□□□□ -0.84
APOE-205ENST00000485628 TRBV10-3A0A0K0K1G6 114 aa9.79□□□□□ -0.84
APOE-205ENST00000485628 A0A1B0GWB2 263 aa9.79□□□□□ -0.84
APOE-205ENST00000485628 GAGE10A6NGK3 116 aa9.78□□□□□ -0.84
APOE-205ENST00000485628 RPL37AP8A6NKH3 93 aa9.78□□□□□ -0.84
APOE-205ENST00000485628 BVES-AS1Q5T3Y7 98 aa9.78□□□□□ -0.84
APOE-205ENST00000485628 A0A0B4J2C4 111 aa9.77□□□□□ -0.85
APOE-205ENST00000485628 KRTAP4-16G5E9R7 235 aaPredicted RBP9.77□□□□□ -0.85
APOE-205ENST00000485628 SMR3BP02814 79 aaPredicted RBP9.77□□□□□ -0.85
APOE-205ENST00000485628 SPRR1AP35321 89 aa9.77□□□□□ -0.85
APOE-205ENST00000485628 TMEM126AQ9H061 195 aa9.77□□□□□ -0.85
APOE-205ENST00000485628 PSORS1C2Q9UIG4 136 aa9.77□□□□□ -0.85
APOE-205ENST00000485628 LINC00528Q8N1L1 170 aa9.76□□□□□ -0.85
APOE-205ENST00000485628 TRAV13-2A0A0B4J235 113 aa9.75□□□□□ -0.85
APOE-205ENST00000485628 TMEM238LA0A1B0GVL6 79 aa9.74□□□□□ -0.85
APOE-205ENST00000485628 A6NJY4 79 aa9.74□□□□□ -0.85
APOE-205ENST00000485628 PRYO14603 147 aa9.73□□□□□ -0.85
APOE-205ENST00000485628 UBE2BP63146 152 aa9.73□□□□□ -0.85
APOE-205ENST00000485628 Q8N1X5 172 aa9.73□□□□□ -0.85
APOE-205ENST00000485628 S100A7L2Q5SY68 101 aa9.72□□□□□ -0.85
APOE-205ENST00000485628 KRTAP13-1Q8IUC0 172 aa9.72□□□□□ -0.85
APOE-205ENST00000485628 M0R143 59 aa9.71□□□□□ -0.86
APOE-205ENST00000485628 HINT1P49773 126 aaPredicted RBP9.71□□□□□ -0.86
APOE-205ENST00000485628 REG3GQ6UW15 175 aa9.71□□□□□ -0.86
APOE-205ENST00000485628 HERC2O95714 4834 aa9.71□□□□□ -0.86
APOE-205ENST00000485628 TRAV23DV6A0A075B6W5 121 aa9.7□□□□□ -0.86
APOE-205ENST00000485628 A6NDN8 102 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms