RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 PPDPFLQ8WWR9 84 aa3.46□□□□□ -1.86
CCDC39-205ENST00000485055 CYTL1Q9NRR1 136 aa3.46□□□□□ -1.86
CCDC39-205ENST00000485055 IGKV3-7A0A075B6H7 116 aa3.45□□□□□ -1.86
CCDC39-205ENST00000485055 IGHV3-30-3P0DP02 117 aa3.45□□□□□ -1.86
CCDC39-205ENST00000485055 SYCNQ0VAF6 134 aa3.45□□□□□ -1.86
CCDC39-205ENST00000485055 SPINK13Q1W4C9 94 aa3.45□□□□□ -1.86
CCDC39-205ENST00000485055 UBE2WQ96B02 151 aa3.45□□□□□ -1.86
CCDC39-205ENST00000485055 IGKV2D-26A0A0A0MRZ7 120 aa3.45□□□□□ -1.86
CCDC39-205ENST00000485055 A0A0B4J2C4 111 aa3.45□□□□□ -1.86
CCDC39-205ENST00000485055 IGHV1-24A0A0C4DH33 117 aa3.45□□□□□ -1.86
CCDC39-205ENST00000485055 TRBV7-7A0A0K0K1E9 115 aa3.45□□□□□ -1.86
CCDC39-205ENST00000485055 A0A1B0GW54 56 aa3.45□□□□□ -1.86
CCDC39-205ENST00000485055 C1orf134Q5TEV5 83 aa3.45□□□□□ -1.86
CCDC39-205ENST00000485055 Q8N976 141 aa3.45□□□□□ -1.86
CCDC39-205ENST00000485055 VPS13BQ7Z7G8 4022 aa3.45□□□□□ -1.86
CCDC39-205ENST00000485055 SERF1AO75920 110 aa3.45□□□□□ -1.86
CCDC39-205ENST00000485055 CCKP06307 115 aa3.45□□□□□ -1.86
CCDC39-205ENST00000485055 NTM-AS1Q6ZSK4 140 aa3.45□□□□□ -1.86
CCDC39-205ENST00000485055 IGLV1-50A0A075B6I6 118 aa3.44□□□□□ -1.86
CCDC39-205ENST00000485055 DNAH10OSP0CZ25 163 aa3.44□□□□□ -1.86
CCDC39-205ENST00000485055 CCL18P55774 89 aa3.44□□□□□ -1.86
CCDC39-205ENST00000485055 FAM19A2Q8N3H0 131 aa3.44□□□□□ -1.86
CCDC39-205ENST00000485055 CHCHD7Q9BUK0 85 aa3.44□□□□□ -1.86
CCDC39-205ENST00000485055 DEFB4AO15263 64 aa3.44□□□□□ -1.86
CCDC39-205ENST00000485055 SH2D1AO60880 128 aa3.44□□□□□ -1.86
CCDC39-205ENST00000485055 C5orf38Q86SI9 138 aa3.44□□□□□ -1.86
CCDC39-205ENST00000485055 Q8N377 158 aa3.44□□□□□ -1.86
CCDC39-205ENST00000485055 C15orf56Q8N910 161 aa3.44□□□□□ -1.86
CCDC39-205ENST00000485055 PPP1R1CQ8WVI7 109 aa3.44□□□□□ -1.86
CCDC39-205ENST00000485055 SDF2L1Q9HCN8 221 aa3.44□□□□□ -1.86
CCDC39-205ENST00000485055 HIGD1BQ9P298 99 aa3.44□□□□□ -1.86
CCDC39-205ENST00000485055 A0A096LPF7 62 aa3.43□□□□□ -1.86
CCDC39-205ENST00000485055 DEFB1P60022 68 aa3.43□□□□□ -1.86
CCDC39-205ENST00000485055 LYZL1Q6UWQ5 148 aa3.43□□□□□ -1.86
CCDC39-205ENST00000485055 Q8N814 137 aa3.43□□□□□ -1.86
CCDC39-205ENST00000485055 LINC00479Q96M42 142 aa3.43□□□□□ -1.86
CCDC39-205ENST00000485055 PRO0255Q9UI72 69 aa3.43□□□□□ -1.86
CCDC39-205ENST00000485055 IGLV2-11P01706 119 aa3.43□□□□□ -1.86
CCDC39-205ENST00000485055 ZNF345Q14585 488 aa3.43□□□□□ -1.86
CCDC39-205ENST00000485055 SMCR5Q8TEV8 140 aa3.43□□□□□ -1.86
CCDC39-205ENST00000485055 TMEM167BQ9NRX6 74 aa3.43□□□□□ -1.86
CCDC39-205ENST00000485055 LY96Q9Y6Y9 160 aa3.43□□□□□ -1.86
CCDC39-205ENST00000485055 IGLV7-46A0A075B6I9 117 aa3.42□□□□□ -1.86
CCDC39-205ENST00000485055 TRBV6-4A0A1B0GX49 114 aa3.42□□□□□ -1.86
CCDC39-205ENST00000485055 BPY2O14599 106 aa3.42□□□□□ -1.86
CCDC39-205ENST00000485055 ZNF22P17026 224 aaPredicted RBP3.42□□□□□ -1.86
CCDC39-205ENST00000485055 PRO0461Q9UI25 63 aa3.42□□□□□ -1.86
CCDC39-205ENST00000485055 TRAV21A0A0B4J279 112 aa3.42□□□□□ -1.86
CCDC39-205ENST00000485055 SYS1-DBNDD2H3BUS1 97 aa3.42□□□□□ -1.86
CCDC39-205ENST00000485055 ATOX1O00244 68 aa3.42□□□□□ -1.86
CCDC39-205ENST00000485055 UBE2G1P62253 170 aa3.42□□□□□ -1.86
CCDC39-205ENST00000485055 RHOHQ15669 191 aa3.42□□□□□ -1.86
CCDC39-205ENST00000485055 MIAQ16674 131 aa3.42□□□□□ -1.86
CCDC39-205ENST00000485055 ESRGQ1W209 222 aa3.42□□□□□ -1.86
CCDC39-205ENST00000485055 PRR9Q5T870 116 aa3.42□□□□□ -1.86
CCDC39-205ENST00000485055 XAGE1AQ9HD64 81 aa3.42□□□□□ -1.86
CCDC39-205ENST00000485055 NOP10Q9NPE3 64 aaKnown RBP3.42□□□□□ -1.86
CCDC39-205ENST00000485055 ICOSQ9Y6W8 199 aa3.42□□□□□ -1.86
CCDC39-205ENST00000485055 PKHD1L1Q86WI1 4243 aa3.42□□□□□ -1.86
CCDC39-205ENST00000485055 HMSDA8MTL9 139 aa3.41□□□□□ -1.86
CCDC39-205ENST00000485055 SDIM1Q6ZPB5 146 aa3.41□□□□□ -1.86
CCDC39-205ENST00000485055 Q8NDZ9 215 aa3.41□□□□□ -1.86
CCDC39-205ENST00000485055 NXT2Q9NPJ8 142 aaKnown RBP3.41□□□□□ -1.86
CCDC39-205ENST00000485055 DNAH8Q96JB1 4490 aa3.41□□□□□ -1.86
CCDC39-205ENST00000485055 LYPD5Q6UWN5 251 aa3.41□□□□□ -1.86
CCDC39-205ENST00000485055 A8MUU9 505 aa3.41□□□□□ -1.86
CCDC39-205ENST00000485055 SFTA3P0C7M3 94 aa3.41□□□□□ -1.86
CCDC39-205ENST00000485055 LINC01556Q5JQF7 62 aa3.41□□□□□ -1.86
CCDC39-205ENST00000485055 TVP23CQ96ET8 276 aa3.41□□□□□ -1.86
CCDC39-205ENST00000485055 PKHD1P08F94 4074 aa3.4□□□□□ -1.86
CCDC39-205ENST00000485055 TRAV12-3A0A0B4J271 114 aa3.4□□□□□ -1.86
CCDC39-205ENST00000485055 IGKV3-20P01619 116 aa3.4□□□□□ -1.86
CCDC39-205ENST00000485055 CFC1P0CG37 223 aa3.4□□□□□ -1.86
CCDC39-205ENST00000485055 ELOBQ15370 118 aa3.4□□□□□ -1.86
CCDC39-205ENST00000485055 Q6ZTI0 123 aa3.4□□□□□ -1.86
CCDC39-205ENST00000485055 UBE2DNLQ8IWF7 75 aa3.4□□□□□ -1.86
CCDC39-205ENST00000485055 SPTSSBQ8NFR3 76 aa3.4□□□□□ -1.86
CCDC39-205ENST00000485055 TXNDC17Q9BRA2 123 aa3.4□□□□□ -1.86
CCDC39-205ENST00000485055 NDUFA12Q9UI09 145 aa3.4□□□□□ -1.86
CCDC39-205ENST00000485055 IGHV3-73A0A0B4J1V6 119 aa3.4□□□□□ -1.87
CCDC39-205ENST00000485055 CTXND1A0A1B0GTU2 59 aa3.4□□□□□ -1.87
CCDC39-205ENST00000485055 IBA57-AS1B1ANH7 110 aa3.4□□□□□ -1.87
CCDC39-205ENST00000485055 M0R3E3 92 aa3.4□□□□□ -1.87
CCDC39-205ENST00000485055 NPYP01303 97 aa3.4□□□□□ -1.87
CCDC39-205ENST00000485055 GCHFRP30047 84 aa3.4□□□□□ -1.87
CCDC39-205ENST00000485055 ROMO1P60602 79 aa3.4□□□□□ -1.87
CCDC39-205ENST00000485055 CRPP02741 224 aa3.39□□□□□ -1.87
CCDC39-205ENST00000485055 LINC00269Q8N2A0 174 aa3.39□□□□□ -1.87
CCDC39-205ENST00000485055 MIR7-3HGQ8N6C7 128 aa3.39□□□□□ -1.87
CCDC39-205ENST00000485055 CYB561D1Q8N8Q1 229 aa3.39□□□□□ -1.87
CCDC39-205ENST00000485055 CMTM2Q8TAZ6 248 aa3.39□□□□□ -1.87
CCDC39-205ENST00000485055 KRTAP17-1Q9BYP8 105 aa3.39□□□□□ -1.87
CCDC39-205ENST00000485055 KRTAP1-5Q9BYS1 174 aa3.39□□□□□ -1.87
CCDC39-205ENST00000485055 UMAD1C9J7I0 102 aa3.39□□□□□ -1.87
CCDC39-205ENST00000485055 PMCHL1Q16048 86 aa3.39□□□□□ -1.87
CCDC39-205ENST00000485055 C18orf32Q8TCD1 76 aa3.39□□□□□ -1.87
CCDC39-205ENST00000485055 RYR1P21817 5038 aa3.38□□□□□ -1.87
CCDC39-205ENST00000485055 IGKV2-40A0A087WW87 121 aaPredicted RBP3.38□□□□□ -1.87
CCDC39-205ENST00000485055 IGKV2D-40P01614 121 aaPredicted RBP3.38□□□□□ -1.87
CCDC39-205ENST00000485055 SERP2Q8N6R1 65 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms