RNA–Protein interactions for RNA: ENST00000484806.1

SFI1-223, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 567 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-223	ENST00000484806	SND1-IT1	Q9HBX3	110 aa		5.22	□□□□□ -1.57
SFI1-223	ENST00000484806	PGPEP1	Q9NXJ5	209 aa		5.22	□□□□□ -1.57
SFI1-223	ENST00000484806	GAGE2D	Q9UEU5	116 aa		5.22	□□□□□ -1.57
SFI1-223	ENST00000484806	PKD1	P98161	4303 aa		5.21	□□□□□ -1.57
SFI1-223	ENST00000484806	LOC107984156	A0A0G2JMH3	177 aa		5.21	□□□□□ -1.58
SFI1-223	ENST00000484806	C16orf90	A8MZG2	172 aa		5.21	□□□□□ -1.58
SFI1-223	ENST00000484806	NDUFC2	O95298	119 aa		5.21	□□□□□ -1.58
SFI1-223	ENST00000484806	HINT1	P49773	126 aa	Predicted RBP	5.21	□□□□□ -1.58
SFI1-223	ENST00000484806	GAGE2B	Q13066	116 aa		5.21	□□□□□ -1.58
SFI1-223	ENST00000484806		Q6ZRP5	223 aa		5.21	□□□□□ -1.58
SFI1-223	ENST00000484806	ARL17A	Q8IVW1	177 aa		5.21	□□□□□ -1.58
SFI1-223	ENST00000484806	PKHD1	P08F94	4074 aa		5.2	□□□□□ -1.58
SFI1-223	ENST00000484806	TRAV13-2	A0A0B4J235	113 aa		5.2	□□□□□ -1.58
SFI1-223	ENST00000484806	BATF	Q16520	125 aa		5.2	□□□□□ -1.58
SFI1-223	ENST00000484806	BVES-AS1	Q5T3Y7	98 aa		5.2	□□□□□ -1.58
SFI1-223	ENST00000484806	RAB37	Q96AX2	223 aa		5.2	□□□□□ -1.58
SFI1-223	ENST00000484806	CBY1	Q9Y3M2	126 aa		5.2	□□□□□ -1.58
SFI1-223	ENST00000484806	RYR3	Q15413	4870 aa		5.2	□□□□□ -1.58
SFI1-223	ENST00000484806		A0A0B4J2C4	111 aa		5.19	□□□□□ -1.58
SFI1-223	ENST00000484806		A4D1N5	150 aa		5.19	□□□□□ -1.58
SFI1-223	ENST00000484806	FXYD2	P54710	66 aa		5.19	□□□□□ -1.58
SFI1-223	ENST00000484806	NKAPP1	Q8N9T2	125 aa		5.19	□□□□□ -1.58
SFI1-223	ENST00000484806	XAGE1A	Q9HD64	81 aa		5.19	□□□□□ -1.58
SFI1-223	ENST00000484806	NHP2	Q9NX24	153 aa	Known RBP	5.19	□□□□□ -1.58
SFI1-223	ENST00000484806	PLA2G2D	Q9UNK4	145 aa		5.19	□□□□□ -1.58
SFI1-223	ENST00000484806		A0A096LNI7	61 aa		5.18	□□□□□ -1.58
SFI1-223	ENST00000484806	IGKV2-24	A0A0C4DH68	120 aa		5.18	□□□□□ -1.58
SFI1-223	ENST00000484806	TRBV10-2	A0A0K0K1G8	114 aa		5.18	□□□□□ -1.58
SFI1-223	ENST00000484806	SOSTDC1	Q6X4U4	206 aa		5.18	□□□□□ -1.58
SFI1-223	ENST00000484806	DYNC1H1	Q14204	4646 aa	Known RBP	5.18	□□□□□ -1.58
SFI1-223	ENST00000484806	LRP1B	Q9NZR2	4599 aa		5.17	□□□□□ -1.58
SFI1-223	ENST00000484806	SMCP	P49901	116 aa	Predicted RBP	5.17	□□□□□ -1.58
SFI1-223	ENST00000484806	COL5A1-AS1	Q5SY13	56 aa		5.17	□□□□□ -1.58
SFI1-223	ENST00000484806	S100A7L2	Q5SY68	101 aa		5.17	□□□□□ -1.58
SFI1-223	ENST00000484806	SDIM1	Q6ZPB5	146 aa		5.17	□□□□□ -1.58
SFI1-223	ENST00000484806	IGLV5-37	A0A075B6J1	123 aa		5.16	□□□□□ -1.58
SFI1-223	ENST00000484806		M0R378	163 aa		5.16	□□□□□ -1.58
SFI1-223	ENST00000484806	CFC1B	P0CG36	223 aa		5.16	□□□□□ -1.58
SFI1-223	ENST00000484806	CFC1	P0CG37	223 aa		5.16	□□□□□ -1.58
SFI1-223	ENST00000484806	LBH	Q53QV2	105 aa	Predicted RBP	5.16	□□□□□ -1.58
SFI1-223	ENST00000484806	C9orf129	Q5T035	196 aa	Known RBP	5.16	□□□□□ -1.58
SFI1-223	ENST00000484806	DPH3	Q96FX2	82 aa		5.16	□□□□□ -1.58
SFI1-223	ENST00000484806	SNHG12	Q9BXW3	62 aa		5.16	□□□□□ -1.58
SFI1-223	ENST00000484806	TMEM126A	Q9H061	195 aa		5.16	□□□□□ -1.58
SFI1-223	ENST00000484806	PRO1854	Q9UHT4	67 aa		5.16	□□□□□ -1.58
SFI1-223	ENST00000484806		A0A1B0GWB2	263 aa		5.15	□□□□□ -1.59
SFI1-223	ENST00000484806	NCR3	O14931	201 aa		5.15	□□□□□ -1.59
SFI1-223	ENST00000484806	VPREB1	P12018	145 aa		5.15	□□□□□ -1.59
SFI1-223	ENST00000484806	RPL13A	P40429	203 aa	Known RBP	5.15	□□□□□ -1.59
SFI1-223	ENST00000484806	KRTAP10-2	P60368	255 aa		5.15	□□□□□ -1.59
SFI1-223	ENST00000484806		Q1RN00	199 aa		5.15	□□□□□ -1.59
SFI1-223	ENST00000484806	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	5.15	□□□□□ -1.59
SFI1-223	ENST00000484806	OR13C6P	Q8NH95	151 aa		5.15	□□□□□ -1.59
SFI1-223	ENST00000484806	SPACA4	Q8TDM5	124 aa		5.15	□□□□□ -1.59
SFI1-223	ENST00000484806		M0QXV9	152 aa		5.14	□□□□□ -1.59
SFI1-223	ENST00000484806	EIF4EBP3	O60516	100 aa	Predicted RBP	5.14	□□□□□ -1.59
SFI1-223	ENST00000484806	LINC01620	Q4KN68	170 aa		5.14	□□□□□ -1.59
SFI1-223	ENST00000484806	C4orf48	Q5BLP8	95 aa		5.14	□□□□□ -1.59
SFI1-223	ENST00000484806	LYRM7	Q5U5X0	104 aa		5.14	□□□□□ -1.59
SFI1-223	ENST00000484806	IGKV2-28	A0A075B6P5	120 aa		5.13	□□□□□ -1.59
SFI1-223	ENST00000484806		J3QL48	77 aa		5.13	□□□□□ -1.59
SFI1-223	ENST00000484806	IGKV2D-28	P01615	120 aa		5.13	□□□□□ -1.59
SFI1-223	ENST00000484806	CHTF8	P0CG12	524 aa		5.13	□□□□□ -1.59
SFI1-223	ENST00000484806	SERTAD4-AS1	Q5TG53	156 aa		5.13	□□□□□ -1.59
SFI1-223	ENST00000484806	MRPL55	Q7Z7F7	128 aa	Known RBP	5.13	□□□□□ -1.59
SFI1-223	ENST00000484806	C22orf24	Q9Y442	160 aa		5.13	□□□□□ -1.59
SFI1-223	ENST00000484806		A0A1B0GVY2	172 aa		5.12	□□□□□ -1.59
SFI1-223	ENST00000484806		K7ERJ3	54 aa		5.12	□□□□□ -1.59
SFI1-223	ENST00000484806	COX6C	P09669	75 aa		5.12	□□□□□ -1.59
SFI1-223	ENST00000484806	FUS	P35637	526 aa	Known RBP eCLIP	5.12	□□□□□ -1.59
SFI1-223	ENST00000484806	UBE2B	P63146	152 aa		5.12	□□□□□ -1.59
SFI1-223	ENST00000484806	LINC00337	Q8N6G1	96 aa		5.12	□□□□□ -1.59
SFI1-223	ENST00000484806	TRAV23DV6	A0A075B6W5	121 aa		5.11	□□□□□ -1.59
SFI1-223	ENST00000484806		A0A087WYN8	130 aa		5.11	□□□□□ -1.59
SFI1-223	ENST00000484806	FAM168B	A1KXE4	195 aa		5.11	□□□□□ -1.59
SFI1-223	ENST00000484806		H7C2G1	150 aa		5.11	□□□□□ -1.59
SFI1-223	ENST00000484806	PRY	O14603	147 aa		5.11	□□□□□ -1.59
SFI1-223	ENST00000484806	IGLV6-57	P01721	117 aa		5.11	□□□□□ -1.59
SFI1-223	ENST00000484806	PSMB2	P49721	201 aa		5.11	□□□□□ -1.59
SFI1-223	ENST00000484806	PLAC8	Q9NZF1	115 aa		5.11	□□□□□ -1.59
SFI1-223	ENST00000484806	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	5.11	□□□□□ -1.59
SFI1-223	ENST00000484806	TRBV10-3	A0A0K0K1G6	114 aa		5.1	□□□□□ -1.59
SFI1-223	ENST00000484806		A0A1W2PNN7	141 aa		5.1	□□□□□ -1.59
SFI1-223	ENST00000484806	TSPAN13	O95857	204 aa		5.1	□□□□□ -1.59
SFI1-223	ENST00000484806	RPL28	P46779	137 aa	Known RBP	5.1	□□□□□ -1.59
SFI1-223	ENST00000484806	PRR3	P79522	188 aa	Known RBP	5.1	□□□□□ -1.59
SFI1-223	ENST00000484806	VAMP3	Q15836	100 aa		5.1	□□□□□ -1.59
SFI1-223	ENST00000484806		Q6ZSA8	131 aa		5.1	□□□□□ -1.59
SFI1-223	ENST00000484806		Q8NDZ9	215 aa		5.1	□□□□□ -1.59
SFI1-223	ENST00000484806	C7orf33	Q8WU49	177 aa		5.1	□□□□□ -1.59
SFI1-223	ENST00000484806	DIRC1	Q969H9	104 aa		5.1	□□□□□ -1.59
SFI1-223	ENST00000484806	LINC00167	Q96N53	147 aa		5.1	□□□□□ -1.59
SFI1-223	ENST00000484806	APOB	P04114	4563 aa	Known RBP	5.09	□□□□□ -1.59
SFI1-223	ENST00000484806	GAGE10	A6NGK3	116 aa		5.09	□□□□□ -1.59
SFI1-223	ENST00000484806	C9orf118	A6NHY6	69 aa		5.09	□□□□□ -1.59
SFI1-223	ENST00000484806	SNCG	O76070	127 aa		5.09	□□□□□ -1.59
SFI1-223	ENST00000484806	KRTAP10-1	P60331	282 aa		5.09	□□□□□ -1.59
SFI1-223	ENST00000484806	VPS13B	Q7Z7G8	4022 aa		5.09	□□□□□ -1.6
SFI1-223	ENST00000484806	IGLV1-50	A0A075B6I6	118 aa		5.08	□□□□□ -1.6
SFI1-223	ENST00000484806	EPM2A	B3EWF7	344 aa		5.08	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms