RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 A4D1N5 150 aa13.2□□□□□ -0.3
VCPKMT-203ENST00000484763 XAGE1AQ9HD64 81 aa13.19□□□□□ -0.3
VCPKMT-203ENST00000484763 PKIGQ9Y2B9 76 aa13.19□□□□□ -0.3
VCPKMT-203ENST00000484763 HECTD4Q9Y4D8 3996 aa13.17□□□□□ -0.3
VCPKMT-203ENST00000484763 A6NDN8 102 aa13.16□□□□□ -0.3
VCPKMT-203ENST00000484763 GAGE2BQ13066 116 aa13.16□□□□□ -0.3
VCPKMT-203ENST00000484763 LINC00336Q6ZUF6 198 aa13.16□□□□□ -0.3
VCPKMT-203ENST00000484763 NHP2Q9NX24 153 aaKnown RBP13.16□□□□□ -0.3
VCPKMT-203ENST00000484763 IGLV5-52A0A0A0MRZ9 124 aa13.16□□□□□ -0.3
VCPKMT-203ENST00000484763 C9orf129Q5T035 196 aaKnown RBP13.14□□□□□ -0.31
VCPKMT-203ENST00000484763 DNAH11Q96DT5 4516 aa13.14□□□□□ -0.31
VCPKMT-203ENST00000484763 C16orf90A8MZG2 172 aa13.13□□□□□ -0.31
VCPKMT-203ENST00000484763 LINC01620Q4KN68 170 aa13.13□□□□□ -0.31
VCPKMT-203ENST00000484763 A0A096LNI7 61 aa13.13□□□□□ -0.31
VCPKMT-203ENST00000484763 NDUFC2O95298 119 aa13.13□□□□□ -0.31
VCPKMT-203ENST00000484763 FUSP35637 526 aaKnown RBP eCLIP13.13□□□□□ -0.31
VCPKMT-203ENST00000484763 A0A1B0GWB2 263 aa13.12□□□□□ -0.31
VCPKMT-203ENST00000484763 CFC1BP0CG36 223 aa13.12□□□□□ -0.31
VCPKMT-203ENST00000484763 CFC1P0CG37 223 aa13.12□□□□□ -0.31
VCPKMT-203ENST00000484763 A0A0B4J2C4 111 aa13.11□□□□□ -0.31
VCPKMT-203ENST00000484763 SDIM1Q6ZPB5 146 aa13.11□□□□□ -0.31
VCPKMT-203ENST00000484763 IGKV2-24A0A0C4DH68 120 aa13.1□□□□□ -0.31
VCPKMT-203ENST00000484763 K7ERJ3 54 aa13.1□□□□□ -0.31
VCPKMT-203ENST00000484763 KRTAP10-2P60368 255 aa13.1□□□□□ -0.31
VCPKMT-203ENST00000484763 Q8NDZ9 215 aa13.1□□□□□ -0.31
VCPKMT-203ENST00000484763 RAB37Q96AX2 223 aa13.1□□□□□ -0.31
VCPKMT-203ENST00000484763 PGPEP1Q9NXJ5 209 aa13.09□□□□□ -0.31
VCPKMT-203ENST00000484763 IGKV2-28A0A075B6P5 120 aa13.08□□□□□ -0.32
VCPKMT-203ENST00000484763 IGKV2D-28P01615 120 aa13.08□□□□□ -0.32
VCPKMT-203ENST00000484763 COL5A1-AS1Q5SY13 56 aa13.08□□□□□ -0.32
VCPKMT-203ENST00000484763 PKD1P98161 4303 aa13.08□□□□□ -0.32
VCPKMT-203ENST00000484763 VPREB1P12018 145 aa13.07□□□□□ -0.32
VCPKMT-203ENST00000484763 PLA2G2DQ9UNK4 145 aa13.07□□□□□ -0.32
VCPKMT-203ENST00000484763 LINC00474Q9P2X8 69 aa13.06□□□□□ -0.32
VCPKMT-203ENST00000484763 NCR3O14931 201 aa13.06□□□□□ -0.32
VCPKMT-203ENST00000484763 PRR3P79522 188 aaKnown RBP13.06□□□□□ -0.32
VCPKMT-203ENST00000484763 CHTF8P0CG12 524 aa13.05□□□□□ -0.32
VCPKMT-203ENST00000484763 LINC00337Q8N6G1 96 aa13.05□□□□□ -0.32
VCPKMT-203ENST00000484763 PRO1854Q9UHT4 67 aa13.05□□□□□ -0.32
VCPKMT-203ENST00000484763 DNAH5Q8TE73 4624 aa13.04□□□□□ -0.32
VCPKMT-203ENST00000484763 TRAV13-2A0A0B4J235 113 aa13.04□□□□□ -0.32
VCPKMT-203ENST00000484763 SERTAD4-AS1Q5TG53 156 aa13.04□□□□□ -0.32
VCPKMT-203ENST00000484763 TRBV10-2A0A0K0K1G8 114 aa13.04□□□□□ -0.32
VCPKMT-203ENST00000484763 FAM168BA1KXE4 195 aa13.04□□□□□ -0.32
VCPKMT-203ENST00000484763 LBHQ53QV2 105 aaPredicted RBP13.03□□□□□ -0.32
VCPKMT-203ENST00000484763 NKAPP1Q8N9T2 125 aa13.02□□□□□ -0.32
VCPKMT-203ENST00000484763 RPL13AP40429 203 aaKnown RBP13.02□□□□□ -0.33
VCPKMT-203ENST00000484763 FAM19A5Q7Z5A7 132 aaPredicted RBP13.02□□□□□ -0.33
VCPKMT-203ENST00000484763 IGLV5-37A0A075B6J1 123 aa13.01□□□□□ -0.33
VCPKMT-203ENST00000484763 SPACA4Q8TDM5 124 aa13.01□□□□□ -0.33
VCPKMT-203ENST00000484763 OR13C6PQ8NH95 151 aa13□□□□□ -0.33
VCPKMT-203ENST00000484763 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13□□□□□ -0.33
VCPKMT-203ENST00000484763 PANO1I0J062 215 aa12.99□□□□□ -0.33
VCPKMT-203ENST00000484763 M0R378 163 aa12.99□□□□□ -0.33
VCPKMT-203ENST00000484763 TAX1BP3O14907 124 aa12.99□□□□□ -0.33
VCPKMT-203ENST00000484763 KRTAP7-1Q8IUC3 87 aa12.99□□□□□ -0.33
VCPKMT-203ENST00000484763 RYR3Q15413 4870 aa12.99□□□□□ -0.33
VCPKMT-203ENST00000484763 S100A7L2Q5SY68 101 aa12.99□□□□□ -0.33
VCPKMT-203ENST00000484763 A0A1B0GVY2 172 aa12.98□□□□□ -0.33
VCPKMT-203ENST00000484763 A0A1W2PNN7 141 aa12.97□□□□□ -0.33
VCPKMT-203ENST00000484763 H7C2G1 150 aa12.97□□□□□ -0.33
VCPKMT-203ENST00000484763 Q1RN00 199 aa12.97□□□□□ -0.33
VCPKMT-203ENST00000484763 TMEM126AQ9H061 195 aa12.97□□□□□ -0.33
VCPKMT-203ENST00000484763 TSPAN13O95857 204 aa12.97□□□□□ -0.33
VCPKMT-203ENST00000484763 C22orf24Q9Y442 160 aa12.97□□□□□ -0.33
VCPKMT-203ENST00000484763 DPH3Q96FX2 82 aa12.96□□□□□ -0.33
VCPKMT-203ENST00000484763 IGLV6-57P01721 117 aa12.95□□□□□ -0.34
VCPKMT-203ENST00000484763 M0QXV9 152 aa12.95□□□□□ -0.34
VCPKMT-203ENST00000484763 MRPL55Q7Z7F7 128 aaKnown RBP12.95□□□□□ -0.34
VCPKMT-203ENST00000484763 C7orf33Q8WU49 177 aa12.95□□□□□ -0.34
VCPKMT-203ENST00000484763 TRBV10-3A0A0K0K1G6 114 aa12.94□□□□□ -0.34
VCPKMT-203ENST00000484763 C9orf118A6NHY6 69 aa12.93□□□□□ -0.34
VCPKMT-203ENST00000484763 GAGE10A6NGK3 116 aa12.92□□□□□ -0.34
VCPKMT-203ENST00000484763 KRTAP10-1P60331 282 aa12.92□□□□□ -0.34
VCPKMT-203ENST00000484763 CBY1Q9Y3M2 126 aa12.92□□□□□ -0.34
VCPKMT-203ENST00000484763 NAA38Q9BRA0 125 aaKnown RBP12.92□□□□□ -0.34
VCPKMT-203ENST00000484763 A0A087WYN8 130 aa12.91□□□□□ -0.34
VCPKMT-203ENST00000484763 H3BUT2 72 aa12.91□□□□□ -0.34
VCPKMT-203ENST00000484763 DNAH8Q96JB1 4490 aa12.9□□□□□ -0.34
VCPKMT-203ENST00000484763 SMIM11BQ8TCY0 68 aa12.9□□□□□ -0.34
VCPKMT-203ENST00000484763 LINC00167Q96N53 147 aa12.9□□□□□ -0.34
VCPKMT-203ENST00000484763 EPM2AB3EWF7 344 aa12.9□□□□□ -0.34
VCPKMT-203ENST00000484763 PKHD1P08F94 4074 aa12.89□□□□□ -0.35
VCPKMT-203ENST00000484763 PSMB2P49721 201 aa12.89□□□□□ -0.35
VCPKMT-203ENST00000484763 RPL28P46779 137 aaKnown RBP12.88□□□□□ -0.35
VCPKMT-203ENST00000484763 Q6ZSA8 131 aa12.88□□□□□ -0.35
VCPKMT-203ENST00000484763 PLAC8Q9NZF1 115 aa12.88□□□□□ -0.35
VCPKMT-203ENST00000484763 TRAV23DV6A0A075B6W5 121 aa12.88□□□□□ -0.35
VCPKMT-203ENST00000484763 IGLV1-50A0A075B6I6 118 aa12.87□□□□□ -0.35
VCPKMT-203ENST00000484763 RPL37AP8A6NKH3 93 aa12.87□□□□□ -0.35
VCPKMT-203ENST00000484763 PHF5AQ7RTV0 110 aaKnown RBP12.87□□□□□ -0.35
VCPKMT-203ENST00000484763 FAM30AQ9NZY2 134 aa12.87□□□□□ -0.35
VCPKMT-203ENST00000484763 TRIAP1O43715 76 aa12.86□□□□□ -0.35
VCPKMT-203ENST00000484763 KCNQ1DNQ9H478 68 aa12.85□□□□□ -0.35
VCPKMT-203ENST00000484763 A0A1W2PPM0 123 aa12.84□□□□□ -0.35
VCPKMT-203ENST00000484763 C21orf62-AS1Q17RA5 79 aa12.84□□□□□ -0.35
VCPKMT-203ENST00000484763 COX6CP09669 75 aa12.83□□□□□ -0.35
VCPKMT-203ENST00000484763 PCP4P48539 62 aa12.83□□□□□ -0.35
VCPKMT-203ENST00000484763 PRYO14603 147 aa12.83□□□□□ -0.36
VCPKMT-203ENST00000484763 ZNF73O43830 326 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms