RNA–Protein interactions for RNA: ENST00000484620.1

PDLIM4-207, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-207ENST00000484620 PLA2G2DQ9UNK4 145 aa12.04□□□□□ -0.48
PDLIM4-207ENST00000484620 A0A1W2PNN7 141 aa12.03□□□□□ -0.48
PDLIM4-207ENST00000484620 FAM168BA1KXE4 195 aa12.03□□□□□ -0.48
PDLIM4-207ENST00000484620 XGP55808 180 aa12.03□□□□□ -0.48
PDLIM4-207ENST00000484620 HAMPP81172 84 aa12.03□□□□□ -0.48
PDLIM4-207ENST00000484620 Q6ZVH6 145 aa12.03□□□□□ -0.48
PDLIM4-207ENST00000484620 SPANXDQ9BXN6 97 aa12.03□□□□□ -0.48
PDLIM4-207ENST00000484620 SPANXCQ9NY87 97 aa12.03□□□□□ -0.48
PDLIM4-207ENST00000484620 RPL24P83731 157 aaKnown RBP12.02□□□□□ -0.49
PDLIM4-207ENST00000484620 COPS9Q8WXC6 57 aa12.02□□□□□ -0.49
PDLIM4-207ENST00000484620 TP73-AS1Q9UF72 201 aa12.02□□□□□ -0.49
PDLIM4-207ENST00000484620 LOC107984156A0A0G2JMH3 177 aa12.01□□□□□ -0.49
PDLIM4-207ENST00000484620 ARL17AQ8IVW1 177 aa12.01□□□□□ -0.49
PDLIM4-207ENST00000484620 EPM2AB3EWF7 344 aa12□□□□□ -0.49
PDLIM4-207ENST00000484620 NPC2P61916 151 aa12□□□□□ -0.49
PDLIM4-207ENST00000484620 SERTAD4-AS1Q5TG53 156 aa12□□□□□ -0.49
PDLIM4-207ENST00000484620 NKAPP1Q8N9T2 125 aa12□□□□□ -0.49
PDLIM4-207ENST00000484620 LINC00308Q8TCZ7 52 aa12□□□□□ -0.49
PDLIM4-207ENST00000484620 SPANXB1Q9NS25 103 aaPredicted RBP12□□□□□ -0.49
PDLIM4-207ENST00000484620 M0QXV9 152 aa11.99□□□□□ -0.49
PDLIM4-207ENST00000484620 IFITM1P13164 125 aa11.99□□□□□ -0.49
PDLIM4-207ENST00000484620 SRSF9Q13242 221 aaKnown RBP eCLIP11.99□□□□□ -0.49
PDLIM4-207ENST00000484620 IGLV5-37A0A075B6J1 123 aa11.98□□□□□ -0.49
PDLIM4-207ENST00000484620 C12orf57Q99622 126 aa11.98□□□□□ -0.49
PDLIM4-207ENST00000484620 HIGD1BQ9P298 99 aa11.98□□□□□ -0.49
PDLIM4-207ENST00000484620 UQCR10Q9UDW1 63 aa11.98□□□□□ -0.49
PDLIM4-207ENST00000484620 VPREB1P12018 145 aa11.97□□□□□ -0.49
PDLIM4-207ENST00000484620 SOSTDC1Q6X4U4 206 aa11.97□□□□□ -0.49
PDLIM4-207ENST00000484620 KRTAP7-1Q8IUC3 87 aa11.97□□□□□ -0.49
PDLIM4-207ENST00000484620 C22orf24Q9Y442 160 aa11.97□□□□□ -0.49
PDLIM4-207ENST00000484620 APOBP04114 4563 aaKnown RBP11.97□□□□□ -0.49
PDLIM4-207ENST00000484620 LBHQ53QV2 105 aaPredicted RBP11.96□□□□□ -0.49
PDLIM4-207ENST00000484620 PPDPFQ9H3Y8 114 aa11.96□□□□□ -0.49
PDLIM4-207ENST00000484620 NDUFC2O95298 119 aa11.95□□□□□ -0.5
PDLIM4-207ENST00000484620 C7orf33Q8WU49 177 aa11.95□□□□□ -0.5
PDLIM4-207ENST00000484620 HIST1H4GQ99525 98 aa11.95□□□□□ -0.5
PDLIM4-207ENST00000484620 C2orf91Q6ZV80 131 aa11.94□□□□□ -0.5
PDLIM4-207ENST00000484620 PHF5AQ7RTV0 110 aaKnown RBP11.94□□□□□ -0.5
PDLIM4-207ENST00000484620 MRPL55Q7Z7F7 128 aaKnown RBP11.94□□□□□ -0.5
PDLIM4-207ENST00000484620 EIF4EBP3O60516 100 aaPredicted RBP11.93□□□□□ -0.5
PDLIM4-207ENST00000484620 MUSTN1Q8IVN3 82 aa11.93□□□□□ -0.5
PDLIM4-207ENST00000484620 Q8NDZ9 215 aa11.93□□□□□ -0.5
PDLIM4-207ENST00000484620 PRO1933Q9H354 126 aa11.93□□□□□ -0.5
PDLIM4-207ENST00000484620 LINC00518Q8N0U6 118 aa11.92□□□□□ -0.5
PDLIM4-207ENST00000484620 M0R378 163 aa11.91□□□□□ -0.5
PDLIM4-207ENST00000484620 NCR3O14931 201 aa11.91□□□□□ -0.5
PDLIM4-207ENST00000484620 UBE2BP63146 152 aa11.91□□□□□ -0.5
PDLIM4-207ENST00000484620 TRBV10-2A0A0K0K1G8 114 aa11.9□□□□□ -0.5
PDLIM4-207ENST00000484620 SMR3BP02814 79 aaPredicted RBP11.9□□□□□ -0.5
PDLIM4-207ENST00000484620 TAL2Q16559 108 aa11.9□□□□□ -0.5
PDLIM4-207ENST00000484620 RYR1P21817 5038 aa11.89□□□□□ -0.51
PDLIM4-207ENST00000484620 GAGE10A6NGK3 116 aa11.89□□□□□ -0.51
PDLIM4-207ENST00000484620 TSTD3H0UI37 97 aa11.89□□□□□ -0.51
PDLIM4-207ENST00000484620 HNRNPA3P51991 378 aaKnown RBP11.89□□□□□ -0.51
PDLIM4-207ENST00000484620 PRR3P79522 188 aaKnown RBP11.89□□□□□ -0.51
PDLIM4-207ENST00000484620 LINC00528Q8N1L1 170 aa11.89□□□□□ -0.51
PDLIM4-207ENST00000484620 LINC00167Q96N53 147 aa11.89□□□□□ -0.51
PDLIM4-207ENST00000484620 KIAA1109Q2LD37 5005 aa11.85□□□□□ -0.51
PDLIM4-207ENST00000484620 RPL37AP8A6NKH3 93 aa11.85□□□□□ -0.51
PDLIM4-207ENST00000484620 FAM229AH3BQW9 127 aa11.85□□□□□ -0.51
PDLIM4-207ENST00000484620 HSD52Q0P140 79 aa11.85□□□□□ -0.51
PDLIM4-207ENST00000484620 S100A7L2Q5SY68 101 aa11.85□□□□□ -0.51
PDLIM4-207ENST00000484620 A4D1N5 150 aa11.84□□□□□ -0.51
PDLIM4-207ENST00000484620 IGLV1-50A0A075B6I6 118 aa11.83□□□□□ -0.52
PDLIM4-207ENST00000484620 IGKV2-28A0A075B6P5 120 aa11.83□□□□□ -0.52
PDLIM4-207ENST00000484620 IGKV2D-28P01615 120 aa11.83□□□□□ -0.52
PDLIM4-207ENST00000484620 CEND1Q8N111 149 aa11.83□□□□□ -0.52
PDLIM4-207ENST00000484620 DDTP30046 118 aa11.82□□□□□ -0.52
PDLIM4-207ENST00000484620 RPL37AP61513 92 aaKnown RBP11.82□□□□□ -0.52
PDLIM4-207ENST00000484620 OR13C6PQ8NH95 151 aa11.82□□□□□ -0.52
PDLIM4-207ENST00000484620 HSPG2P98160 4391 aa11.82□□□□□ -0.52
PDLIM4-207ENST00000484620 TRBV10-3A0A0K0K1G6 114 aa11.81□□□□□ -0.52
PDLIM4-207ENST00000484620 TMEM238LA0A1B0GVL6 79 aa11.81□□□□□ -0.52
PDLIM4-207ENST00000484620 A6NJY4 79 aa11.81□□□□□ -0.52
PDLIM4-207ENST00000484620 Q8N1X5 172 aa11.81□□□□□ -0.52
PDLIM4-207ENST00000484620 PSORS1C2Q9UIG4 136 aa11.81□□□□□ -0.52
PDLIM4-207ENST00000484620 CBY1Q9Y3M2 126 aa11.81□□□□□ -0.52
PDLIM4-207ENST00000484620 PLA2G1BP04054 148 aaKnown RBP11.8□□□□□ -0.52
PDLIM4-207ENST00000484620 KRTAP11-1Q8IUC1 163 aa11.8□□□□□ -0.52
PDLIM4-207ENST00000484620 TMEM126AQ9H061 195 aa11.8□□□□□ -0.52
PDLIM4-207ENST00000484620 TRAV13-2A0A0B4J235 113 aa11.79□□□□□ -0.52
PDLIM4-207ENST00000484620 IGLV6-57P01721 117 aa11.79□□□□□ -0.52
PDLIM4-207ENST00000484620 LINC00337Q8N6G1 96 aa11.79□□□□□ -0.52
PDLIM4-207ENST00000484620 A6NDN8 102 aa11.78□□□□□ -0.52
PDLIM4-207ENST00000484620 PRYO14603 147 aa11.78□□□□□ -0.52
PDLIM4-207ENST00000484620 C1orf137Q5JT78 98 aa11.78□□□□□ -0.52
PDLIM4-207ENST00000484620 Q5VSD8 79 aa11.78□□□□□ -0.52
PDLIM4-207ENST00000484620 REG3GQ6UW15 175 aa11.77□□□□□ -0.53
PDLIM4-207ENST00000484620 KCNQ1DNQ9H478 68 aa11.77□□□□□ -0.53
PDLIM4-207ENST00000484620 TRAV23DV6A0A075B6W5 121 aa11.75□□□□□ -0.53
PDLIM4-207ENST00000484620 FXYD2P54710 66 aa11.75□□□□□ -0.53
PDLIM4-207ENST00000484620 BCE1O60756 84 aa11.74□□□□□ -0.53
PDLIM4-207ENST00000484620 CTAG1AP78358 180 aa11.74□□□□□ -0.53
PDLIM4-207ENST00000484620 RAB37Q96AX2 223 aa11.74□□□□□ -0.53
PDLIM4-207ENST00000484620 HERC2O95714 4834 aa11.74□□□□□ -0.53
PDLIM4-207ENST00000484620 A0A0B4J2C4 111 aa11.73□□□□□ -0.53
PDLIM4-207ENST00000484620 M0R143 59 aa11.72□□□□□ -0.53
PDLIM4-207ENST00000484620 CFC1BP0CG36 223 aa11.72□□□□□ -0.53
PDLIM4-207ENST00000484620 CFC1P0CG37 223 aa11.72□□□□□ -0.53
PDLIM4-207ENST00000484620 IGLV7-43P04211 117 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms