RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 KRTAP13-2Q52LG2 175 aa16.65■□□□□ 0.26
HLA-C-207ENST00000484378 Q8NDZ9 215 aa16.65■□□□□ 0.26
HLA-C-207ENST00000484378 LINC00158P58513 81 aa16.64■□□□□ 0.25
HLA-C-207ENST00000484378 CHCHD1Q96BP2 118 aaKnown RBP16.64■□□□□ 0.25
HLA-C-207ENST00000484378 IFI27L1Q96BM0 104 aa16.63■□□□□ 0.25
HLA-C-207ENST00000484378 M0R378 163 aa16.62■□□□□ 0.25
HLA-C-207ENST00000484378 TRAV12-1A0A0B4J245 112 aa16.61■□□□□ 0.25
HLA-C-207ENST00000484378 TMEM223A0PJW6 202 aa16.61■□□□□ 0.25
HLA-C-207ENST00000484378 YPEL4Q96NS1 127 aa16.6■□□□□ 0.25
HLA-C-207ENST00000484378 IGKV2D-26A0A0A0MRZ7 120 aa16.59■□□□□ 0.25
HLA-C-207ENST00000484378 A0A0U1RRA0 63 aa16.59■□□□□ 0.25
HLA-C-207ENST00000484378 LINC00304Q8N9R0 145 aa16.57■□□□□ 0.24
HLA-C-207ENST00000484378 CBLN2Q8IUK8 224 aa16.55■□□□□ 0.24
HLA-C-207ENST00000484378 ATP6V1G1O75348 118 aa16.54■□□□□ 0.24
HLA-C-207ENST00000484378 HSBP1O75506 76 aa16.53■□□□□ 0.24
HLA-C-207ENST00000484378 PLEKHB2Q96CS7 222 aa16.53■□□□□ 0.24
HLA-C-207ENST00000484378 HIGD2AQ9BW72 106 aa16.53■□□□□ 0.24
HLA-C-207ENST00000484378 SMIM13P0DJ93 91 aa16.52■□□□□ 0.24
HLA-C-207ENST00000484378 MEIG1Q5JSS6 88 aa16.52■□□□□ 0.24
HLA-C-207ENST00000484378 FAM19A2Q8N3H0 131 aa16.5■□□□□ 0.23
HLA-C-207ENST00000484378 MUC2Q02817 5179 aa16.49■□□□□ 0.23
HLA-C-207ENST00000484378 BOD1L2Q8IYS8 172 aa16.49■□□□□ 0.23
HLA-C-207ENST00000484378 RETNLBQ9BQ08 111 aa16.49■□□□□ 0.23
HLA-C-207ENST00000484378 HERV-K104P63124 156 aa16.48■□□□□ 0.23
HLA-C-207ENST00000484378 H0Y8G0 127 aa16.47■□□□□ 0.23
HLA-C-207ENST00000484378 MIR7-3HGQ8N6C7 128 aa16.47■□□□□ 0.23
HLA-C-207ENST00000484378 NDUFA12Q9UI09 145 aa16.46■□□□□ 0.23
HLA-C-207ENST00000484378 NCR3O14931 201 aa16.45■□□□□ 0.22
HLA-C-207ENST00000484378 PRYO14603 147 aa16.44■□□□□ 0.22
HLA-C-207ENST00000484378 C3orf22Q8N5N4 141 aa16.44■□□□□ 0.22
HLA-C-207ENST00000484378 LINC00587B1AMM8 73 aa16.43■□□□□ 0.22
HLA-C-207ENST00000484378 MYMXA0A1B0GTQ4 84 aa16.42■□□□□ 0.22
HLA-C-207ENST00000484378 SPRR4Q96PI1 79 aa16.42■□□□□ 0.22
HLA-C-207ENST00000484378 MAP1LC3CQ9BXW4 147 aa16.41■□□□□ 0.22
HLA-C-207ENST00000484378 ZNF706Q9Y5V0 76 aaPredicted RBP16.41■□□□□ 0.22
HLA-C-207ENST00000484378 LEPROTL1O95214 131 aa16.4■□□□□ 0.22
HLA-C-207ENST00000484378 TRGC2P03986 189 aa16.4■□□□□ 0.22
HLA-C-207ENST00000484378 CTAG1AP78358 180 aa16.39■□□□□ 0.21
HLA-C-207ENST00000484378 LINC00337Q8N6G1 96 aa16.38■□□□□ 0.21
HLA-C-207ENST00000484378 SERF1AO75920 110 aa16.37■□□□□ 0.21
HLA-C-207ENST00000484378 KCNQ1DNQ9H478 68 aa16.37■□□□□ 0.21
HLA-C-207ENST00000484378 ETDCA0A1B0GVM5 59 aa16.36■□□□□ 0.21
HLA-C-207ENST00000484378 SPRR1AP35321 89 aa16.36■□□□□ 0.21
HLA-C-207ENST00000484378 TSPEAR-AS2P59090 65 aa16.36■□□□□ 0.21
HLA-C-207ENST00000484378 PLNP26678 52 aa16.35■□□□□ 0.21
HLA-C-207ENST00000484378 LINC00310P59036 64 aa16.35■□□□□ 0.21
HLA-C-207ENST00000484378 TRBV10-3A0A0K0K1G6 114 aa16.34■□□□□ 0.21
HLA-C-207ENST00000484378 A0A0U1RQV1 116 aa16.34■□□□□ 0.21
HLA-C-207ENST00000484378 LEPROTO15243 131 aa16.34■□□□□ 0.21
HLA-C-207ENST00000484378 IGLV7-46A0A075B6I9 117 aa16.33■□□□□ 0.2
HLA-C-207ENST00000484378 S100A12P80511 92 aa16.33■□□□□ 0.2
HLA-C-207ENST00000484378 TPRXLQ17RH7 258 aa16.32■□□□□ 0.2
HLA-C-207ENST00000484378 SPAG11AQ6PDA7 123 aa16.32■□□□□ 0.2
HLA-C-207ENST00000484378 DAND5Q8N907 189 aa16.32■□□□□ 0.2
HLA-C-207ENST00000484378 HSPB8Q9UJY1 196 aa16.32■□□□□ 0.2
HLA-C-207ENST00000484378 CDIP1Q9H305 208 aa16.31■□□□□ 0.2
HLA-C-207ENST00000484378 KRTAP4-16G5E9R7 235 aaPredicted RBP16.3■□□□□ 0.2
HLA-C-207ENST00000484378 HERVK_113P61574 105 aa16.3■□□□□ 0.2
HLA-C-207ENST00000484378 SMCR5Q8TEV8 140 aa16.3■□□□□ 0.2
HLA-C-207ENST00000484378 J3QQQ9 107 aa16.29■□□□□ 0.2
HLA-C-207ENST00000484378 DPM2O94777 84 aa16.29■□□□□ 0.2
HLA-C-207ENST00000484378 FABP4P15090 132 aa16.29■□□□□ 0.2
HLA-C-207ENST00000484378 PMCHL2Q9BQD1 86 aa16.28■□□□□ 0.2
HLA-C-207ENST00000484378 PPDPFQ9H3Y8 114 aa16.28■□□□□ 0.2
HLA-C-207ENST00000484378 C4orf48Q5BLP8 95 aa16.27■□□□□ 0.2
HLA-C-207ENST00000484378 LOC107984156A0A0G2JMH3 177 aa16.25■□□□□ 0.19
HLA-C-207ENST00000484378 LGALS3P17931 250 aaKnown RBP16.25■□□□□ 0.19
HLA-C-207ENST00000484378 DDTP30046 118 aa16.25■□□□□ 0.19
HLA-C-207ENST00000484378 ARL17AQ8IVW1 177 aa16.25■□□□□ 0.19
HLA-C-207ENST00000484378 Q8NBF4 154 aa16.25■□□□□ 0.19
HLA-C-207ENST00000484378 MIEN1Q9BRT3 115 aa16.25■□□□□ 0.19
HLA-C-207ENST00000484378 IGKCP01834 107 aa16.24■□□□□ 0.19
HLA-C-207ENST00000484378 NMUP48645 174 aa16.24■□□□□ 0.19
HLA-C-207ENST00000484378 TRBV10-2A0A0K0K1G8 114 aa16.23■□□□□ 0.19
HLA-C-207ENST00000484378 B5MCH6 92 aa16.22■□□□□ 0.19
HLA-C-207ENST00000484378 SPANXB1Q9NS25 103 aaPredicted RBP16.22■□□□□ 0.19
HLA-C-207ENST00000484378 LINC00483Q53H64 154 aa16.2■□□□□ 0.18
HLA-C-207ENST00000484378 GAGE2AQ6NT46 116 aa16.19■□□□□ 0.18
HLA-C-207ENST00000484378 COLCA2A8K830 154 aa16.17■□□□□ 0.18
HLA-C-207ENST00000484378 FP248Q71RG6 208 aaPredicted RBP16.17■□□□□ 0.18
HLA-C-207ENST00000484378 SLC7A5P1Q8MH63 180 aa16.17■□□□□ 0.18
HLA-C-207ENST00000484378 ERC2-IT1O76042 136 aa16.16■□□□□ 0.18
HLA-C-207ENST00000484378 S100A7L2Q5SY68 101 aa16.16■□□□□ 0.18
HLA-C-207ENST00000484378 NDUFC2O95298 119 aa16.15■□□□□ 0.18
HLA-C-207ENST00000484378 Q6ZRX8 168 aa16.15■□□□□ 0.18
HLA-C-207ENST00000484378 Q9BRP9 147 aa16.14■□□□□ 0.17
HLA-C-207ENST00000484378 SPINK1P00995 79 aa16.13■□□□□ 0.17
HLA-C-207ENST00000484378 IGLV6-57P01721 117 aa16.13■□□□□ 0.17
HLA-C-207ENST00000484378 IGLV9-49A0A0B4J1Y8 123 aa16.12■□□□□ 0.17
HLA-C-207ENST00000484378 NPC2P61916 151 aa16.12■□□□□ 0.17
HLA-C-207ENST00000484378 MOBPQ13875 183 aa16.12■□□□□ 0.17
HLA-C-207ENST00000484378 MUC17Q685J3 4493 aa16.1■□□□□ 0.17
HLA-C-207ENST00000484378 TRAV23DV6A0A075B6W5 121 aa16.1■□□□□ 0.17
HLA-C-207ENST00000484378 A0A0J9YXY3 114 aa16.1■□□□□ 0.17
HLA-C-207ENST00000484378 E9PLD3 99 aa16.1■□□□□ 0.17
HLA-C-207ENST00000484378 SOSTDC1Q6X4U4 206 aa16.09■□□□□ 0.17
HLA-C-207ENST00000484378 ADAMTSL4-AS1Q5T5F5 129 aa16.08■□□□□ 0.16
HLA-C-207ENST00000484378 JOSD1Q15040 202 aaPredicted RBP16.07■□□□□ 0.16
HLA-C-207ENST00000484378 EIF4EBP3O60516 100 aaPredicted RBP16.06■□□□□ 0.16
HLA-C-207ENST00000484378 ZNF73O43830 326 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms