RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-210ENST00000484077 C6orf48Q9UBA6 75 aa3.83□□□□□ -1.8
RIF1-210ENST00000484077 CDKN2A-AS1Q9UH64 79 aa3.83□□□□□ -1.8
RIF1-210ENST00000484077 TRBV30A0A0K0K1B3 111 aa3.82□□□□□ -1.8
RIF1-210ENST00000484077 KIAA0087Q14695 138 aa3.82□□□□□ -1.8
RIF1-210ENST00000484077 Q8IZM0 81 aa3.82□□□□□ -1.8
RIF1-210ENST00000484077 DPH3Q96FX2 82 aa3.82□□□□□ -1.8
RIF1-210ENST00000484077 FLG2Q5D862 2391 aaPredicted RBP3.81□□□□□ -1.8
RIF1-210ENST00000484077 ATP5LO75964 103 aa3.81□□□□□ -1.8
RIF1-210ENST00000484077 TLX1NBP0CAT3 122 aa3.81□□□□□ -1.8
RIF1-210ENST00000484077 IGLC3P0DOY3 106 aa3.81□□□□□ -1.8
RIF1-210ENST00000484077 CXCL5P42830 114 aa3.81□□□□□ -1.8
RIF1-210ENST00000484077 CKS1BP61024 79 aa3.81□□□□□ -1.8
RIF1-210ENST00000484077 PRR3P79522 188 aaKnown RBP3.81□□□□□ -1.8
RIF1-210ENST00000484077 PDZD11Q5EBL8 140 aa3.81□□□□□ -1.8
RIF1-210ENST00000484077 C2orf82Q6UX34 121 aa3.81□□□□□ -1.8
RIF1-210ENST00000484077 UNQ6190/PRO20217Q6UXQ8 127 aa3.81□□□□□ -1.8
RIF1-210ENST00000484077 CHCHD1Q96BP2 118 aaKnown RBP3.81□□□□□ -1.8
RIF1-210ENST00000484077 CST9LQ9H4G1 147 aa3.81□□□□□ -1.8
RIF1-210ENST00000484077 FAT3Q8TDW7 4589 aa3.81□□□□□ -1.8
RIF1-210ENST00000484077 NDUFC2-KCTD14E9PQ53 114 aa3.8□□□□□ -1.8
RIF1-210ENST00000484077 H3BRM9 83 aa3.8□□□□□ -1.8
RIF1-210ENST00000484077 HSBP1O75506 76 aa3.8□□□□□ -1.8
RIF1-210ENST00000484077 TRGC2P03986 189 aa3.8□□□□□ -1.8
RIF1-210ENST00000484077 SPINK8P0C7L1 97 aa3.8□□□□□ -1.8
RIF1-210ENST00000484077 HNRNPA3P51991 378 aaKnown RBP3.8□□□□□ -1.8
RIF1-210ENST00000484077 NDUFA6P56556 154 aa3.8□□□□□ -1.8
RIF1-210ENST00000484077 C9orf116Q5BN46 136 aaPredicted RBP3.8□□□□□ -1.8
RIF1-210ENST00000484077 BAGE3Q86Y29 109 aa3.8□□□□□ -1.8
RIF1-210ENST00000484077 F8VRH5 84 aa3.79□□□□□ -1.8
RIF1-210ENST00000484077 ZNF22P17026 224 aaPredicted RBP3.79□□□□□ -1.8
RIF1-210ENST00000484077 C6orf226Q5I0X4 101 aa3.79□□□□□ -1.8
RIF1-210ENST00000484077 KRTAP5-4Q6L8H1 288 aa3.79□□□□□ -1.8
RIF1-210ENST00000484077 PET117Q6UWS5 81 aa3.79□□□□□ -1.8
RIF1-210ENST00000484077 FAM19A5Q7Z5A7 132 aaPredicted RBP3.79□□□□□ -1.8
RIF1-210ENST00000484077 COX7B2Q8TF08 81 aa3.79□□□□□ -1.8
RIF1-210ENST00000484077 DMBT1Q9UGM3 2413 aaPredicted RBP3.78□□□□□ -1.8
RIF1-210ENST00000484077 A0A1W2PNN7 141 aa3.78□□□□□ -1.8
RIF1-210ENST00000484077 FAM168BA1KXE4 195 aa3.78□□□□□ -1.8
RIF1-210ENST00000484077 C11orf86A6NJI1 115 aa3.78□□□□□ -1.8
RIF1-210ENST00000484077 COLCA2A8K830 154 aa3.78□□□□□ -1.8
RIF1-210ENST00000484077 M0QXV9 152 aa3.78□□□□□ -1.8
RIF1-210ENST00000484077 SCO1O75880 301 aa3.78□□□□□ -1.8
RIF1-210ENST00000484077 SERF1AO75920 110 aa3.78□□□□□ -1.8
RIF1-210ENST00000484077 IFI27L1Q96BM0 104 aa3.78□□□□□ -1.8
RIF1-210ENST00000484077 CHTOPQ9Y3Y2 248 aaKnown RBP3.78□□□□□ -1.8
RIF1-210ENST00000484077 LRP1Q07954 4544 aaKnown RBP3.77□□□□□ -1.81
RIF1-210ENST00000484077 TRAV12-1A0A0B4J245 112 aa3.77□□□□□ -1.81
RIF1-210ENST00000484077 H0Y8G0 127 aa3.77□□□□□ -1.81
RIF1-210ENST00000484077 C9orf129Q5T035 196 aaKnown RBP3.77□□□□□ -1.81
RIF1-210ENST00000484077 TMEM170BQ5T4T1 132 aa3.77□□□□□ -1.81
RIF1-210ENST00000484077 PHF5AQ7RTV0 110 aaKnown RBP3.77□□□□□ -1.81
RIF1-210ENST00000484077 FAM19A2Q8N3H0 131 aa3.77□□□□□ -1.81
RIF1-210ENST00000484077 LEPROTL1O95214 131 aa3.76□□□□□ -1.81
RIF1-210ENST00000484077 SRSF9Q13242 221 aaKnown RBP eCLIP3.76□□□□□ -1.81
RIF1-210ENST00000484077 A8MU10 97 aa3.75□□□□□ -1.81
RIF1-210ENST00000484077 HIST1H2BKO60814 126 aa3.75□□□□□ -1.81
RIF1-210ENST00000484077 OXTP01178 125 aa3.75□□□□□ -1.81
RIF1-210ENST00000484077 HIST1H2BJP06899 126 aa3.75□□□□□ -1.81
RIF1-210ENST00000484077 HIST1H2BOP23527 126 aa3.75□□□□□ -1.81
RIF1-210ENST00000484077 HIST1H2BBP33778 126 aa3.75□□□□□ -1.81
RIF1-210ENST00000484077 HIST1H2BDP58876 126 aa3.75□□□□□ -1.81
RIF1-210ENST00000484077 HIST1H2BCP62807 126 aa3.75□□□□□ -1.81
RIF1-210ENST00000484077 UBE2BP63146 152 aa3.75□□□□□ -1.81
RIF1-210ENST00000484077 HIST2H2BEQ16778 126 aa3.75□□□□□ -1.81
RIF1-210ENST00000484077 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.75□□□□□ -1.81
RIF1-210ENST00000484077 SFTA2Q6UW10 78 aa3.75□□□□□ -1.81
RIF1-210ENST00000484077 HIST1H2BHQ93079 126 aa3.75□□□□□ -1.81
RIF1-210ENST00000484077 HIST1H2BNQ99877 126 aa3.75□□□□□ -1.81
RIF1-210ENST00000484077 HIST1H2BMQ99879 126 aa3.75□□□□□ -1.81
RIF1-210ENST00000484077 XAGE1AQ9HD64 81 aa3.75□□□□□ -1.81
RIF1-210ENST00000484077 PSORS1C2Q9UIG4 136 aa3.75□□□□□ -1.81
RIF1-210ENST00000484077 HSPB8Q9UJY1 196 aa3.75□□□□□ -1.81
RIF1-210ENST00000484077 TMEM223A0PJW6 202 aa3.74□□□□□ -1.81
RIF1-210ENST00000484077 HERC1Q15751 4861 aa3.74□□□□□ -1.81
RIF1-210ENST00000484077 C1orf137Q5JT78 98 aa3.74□□□□□ -1.81
RIF1-210ENST00000484077 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
RIF1-210ENST00000484077 ERG28Q9UKR5 140 aa3.74□□□□□ -1.81
RIF1-210ENST00000484077 TNXBP22105 4242 aa3.74□□□□□ -1.81
RIF1-210ENST00000484077 NUPR1O60356 82 aa3.73□□□□□ -1.81
RIF1-210ENST00000484077 FABP4P15090 132 aa3.73□□□□□ -1.81
RIF1-210ENST00000484077 PLNP26678 52 aa3.73□□□□□ -1.81
RIF1-210ENST00000484077 PFN2P35080 140 aa3.73□□□□□ -1.81
RIF1-210ENST00000484077 SPINK6Q6UWN8 80 aa3.73□□□□□ -1.81
RIF1-210ENST00000484077 ZNF625Q96I27 306 aaPredicted RBP3.73□□□□□ -1.81
RIF1-210ENST00000484077 ATP6V1G1O75348 118 aa3.72□□□□□ -1.81
RIF1-210ENST00000484077 DPM2O94777 84 aa3.72□□□□□ -1.81
RIF1-210ENST00000484077 IGKCP01834 107 aa3.72□□□□□ -1.81
RIF1-210ENST00000484077 HERVK_113P61574 105 aa3.72□□□□□ -1.81
RIF1-210ENST00000484077 COX17Q14061 63 aa3.72□□□□□ -1.81
RIF1-210ENST00000484077 REG3GQ6UW15 175 aa3.72□□□□□ -1.81
RIF1-210ENST00000484077 MRPL55Q7Z7F7 128 aaKnown RBP3.72□□□□□ -1.81
RIF1-210ENST00000484077 KRTAP11-1Q8IUC1 163 aa3.72□□□□□ -1.81
RIF1-210ENST00000484077 NKAPP1Q8N9T2 125 aa3.72□□□□□ -1.81
RIF1-210ENST00000484077 MAP1LC3CQ9BXW4 147 aa3.72□□□□□ -1.81
RIF1-210ENST00000484077 TP73-AS1Q9UF72 201 aa3.72□□□□□ -1.81
RIF1-210ENST00000484077 C22orf24Q9Y442 160 aa3.72□□□□□ -1.81
RIF1-210ENST00000484077 A4D1N5 150 aa3.71□□□□□ -1.82
RIF1-210ENST00000484077 IGLV7-43P04211 117 aa3.71□□□□□ -1.82
RIF1-210ENST00000484077 TSPEAR-AS2P59090 65 aa3.71□□□□□ -1.82
RIF1-210ENST00000484077 LBHQ53QV2 105 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms