RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 LINC00308Q8TCZ7 52 aa9.1□□□□□ -0.95
SMAD9-204ENST00000483941 LOC107984156A0A0G2JMH3 177 aa9.09□□□□□ -0.95
SMAD9-204ENST00000483941 HINT1P49773 126 aaPredicted RBP9.09□□□□□ -0.95
SMAD9-204ENST00000483941 WFDC2Q14508 124 aa9.09□□□□□ -0.95
SMAD9-204ENST00000483941 C9orf116Q5BN46 136 aaPredicted RBP9.09□□□□□ -0.95
SMAD9-204ENST00000483941 BVES-AS1Q5T3Y7 98 aa9.09□□□□□ -0.95
SMAD9-204ENST00000483941 ARL17AQ8IVW1 177 aa9.09□□□□□ -0.95
SMAD9-204ENST00000483941 CDK2AP2O75956 126 aa9.08□□□□□ -0.96
SMAD9-204ENST00000483941 SLPIP03973 132 aa9.08□□□□□ -0.96
SMAD9-204ENST00000483941 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.07□□□□□ -0.96
SMAD9-204ENST00000483941 DAND5Q8N907 189 aa9.07□□□□□ -0.96
SMAD9-204ENST00000483941 SND1-IT1Q9HBX3 110 aa9.07□□□□□ -0.96
SMAD9-204ENST00000483941 C16orf90A8MZG2 172 aa9.06□□□□□ -0.96
SMAD9-204ENST00000483941 C9orf163Q8N9P6 203 aa9.06□□□□□ -0.96
SMAD9-204ENST00000483941 LINC00474Q9P2X8 69 aa9.06□□□□□ -0.96
SMAD9-204ENST00000483941 NDUFC2O95298 119 aa9.05□□□□□ -0.96
SMAD9-204ENST00000483941 RPL18AQ02543 176 aaKnown RBP9.05□□□□□ -0.96
SMAD9-204ENST00000483941 BATFQ16520 125 aa9.05□□□□□ -0.96
SMAD9-204ENST00000483941 LBHQ53QV2 105 aaPredicted RBP9.05□□□□□ -0.96
SMAD9-204ENST00000483941 DMBT1Q9UGM3 2413 aaPredicted RBP9.05□□□□□ -0.96
SMAD9-204ENST00000483941 A4D1N5 150 aa9.04□□□□□ -0.96
SMAD9-204ENST00000483941 NPC2P61916 151 aa9.04□□□□□ -0.96
SMAD9-204ENST00000483941 GAGE2EQ4V326 116 aa9.04□□□□□ -0.96
SMAD9-204ENST00000483941 PGPEP1Q9NXJ5 209 aa9.04□□□□□ -0.96
SMAD9-204ENST00000483941 GAGE2DQ9UEU5 116 aa9.04□□□□□ -0.96
SMAD9-204ENST00000483941 FXYD2P54710 66 aa9.03□□□□□ -0.96
SMAD9-204ENST00000483941 TNP2Q05952 138 aa9.03□□□□□ -0.96
SMAD9-204ENST00000483941 COL5A1-AS1Q5SY13 56 aa9.03□□□□□ -0.96
SMAD9-204ENST00000483941 Q6ZRP5 223 aa9.03□□□□□ -0.96
SMAD9-204ENST00000483941 Q8N1X5 172 aa9.03□□□□□ -0.96
SMAD9-204ENST00000483941 RAB37Q96AX2 223 aa9.03□□□□□ -0.96
SMAD9-204ENST00000483941 IGLV5-52A0A0A0MRZ9 124 aa9.02□□□□□ -0.97
SMAD9-204ENST00000483941 TRAV13-2A0A0B4J235 113 aa9.02□□□□□ -0.97
SMAD9-204ENST00000483941 A0A0B4J2C4 111 aa9.02□□□□□ -0.97
SMAD9-204ENST00000483941 GAGE2BQ13066 116 aa9.02□□□□□ -0.97
SMAD9-204ENST00000483941 SNHG12Q9BXW3 62 aa9.02□□□□□ -0.97
SMAD9-204ENST00000483941 NHP2Q9NX24 153 aaKnown RBP9.02□□□□□ -0.97
SMAD9-204ENST00000483941 A0A1B0GWB2 263 aa9.01□□□□□ -0.97
SMAD9-204ENST00000483941 SOSTDC1Q6X4U4 206 aa9.01□□□□□ -0.97
SMAD9-204ENST00000483941 PLA2G2DQ9UNK4 145 aa9.01□□□□□ -0.97
SMAD9-204ENST00000483941 CBY1Q9Y3M2 126 aa9.01□□□□□ -0.97
SMAD9-204ENST00000483941 VPS13BQ7Z7G8 4022 aa9□□□□□ -0.97
SMAD9-204ENST00000483941 TRBV10-2A0A0K0K1G8 114 aa9□□□□□ -0.97
SMAD9-204ENST00000483941 XAGE1AQ9HD64 81 aa9□□□□□ -0.97
SMAD9-204ENST00000483941 PRO1854Q9UHT4 67 aa9□□□□□ -0.97
SMAD9-204ENST00000483941 CFC1BP0CG36 223 aa8.99□□□□□ -0.97
SMAD9-204ENST00000483941 CFC1P0CG37 223 aa8.99□□□□□ -0.97
SMAD9-204ENST00000483941 MYCBP2O75592 4640 aa8.99□□□□□ -0.97
SMAD9-204ENST00000483941 SDIM1Q6ZPB5 146 aa8.98□□□□□ -0.97
SMAD9-204ENST00000483941 NKAPP1Q8N9T2 125 aa8.97□□□□□ -0.97
SMAD9-204ENST00000483941 FAT1Q14517 4588 aa8.96□□□□□ -0.97
SMAD9-204ENST00000483941 EIF4EBP3O60516 100 aaPredicted RBP8.96□□□□□ -0.98
SMAD9-204ENST00000483941 C9orf129Q5T035 196 aaKnown RBP8.96□□□□□ -0.98
SMAD9-204ENST00000483941 TMEM126AQ9H061 195 aa8.96□□□□□ -0.98
SMAD9-204ENST00000483941 M0R378 163 aa8.95□□□□□ -0.98
SMAD9-204ENST00000483941 S100A7L2Q5SY68 101 aa8.95□□□□□ -0.98
SMAD9-204ENST00000483941 DPH3Q96FX2 82 aa8.95□□□□□ -0.98
SMAD9-204ENST00000483941 IGLV5-37A0A075B6J1 123 aa8.94□□□□□ -0.98
SMAD9-204ENST00000483941 A0A096LNI7 61 aa8.94□□□□□ -0.98
SMAD9-204ENST00000483941 IGKV2-24A0A0C4DH68 120 aa8.94□□□□□ -0.98
SMAD9-204ENST00000483941 VPREB1P12018 145 aa8.94□□□□□ -0.98
SMAD9-204ENST00000483941 OR13C6PQ8NH95 151 aa8.94□□□□□ -0.98
SMAD9-204ENST00000483941 Q1RN00 199 aa8.93□□□□□ -0.98
SMAD9-204ENST00000483941 IGKV2-28A0A075B6P5 120 aa8.92□□□□□ -0.98
SMAD9-204ENST00000483941 K7ERJ3 54 aa8.92□□□□□ -0.98
SMAD9-204ENST00000483941 IGKV2D-28P01615 120 aa8.92□□□□□ -0.98
SMAD9-204ENST00000483941 RPL13AP40429 203 aaKnown RBP8.92□□□□□ -0.98
SMAD9-204ENST00000483941 LYRM7Q5U5X0 104 aa8.92□□□□□ -0.98
SMAD9-204ENST00000483941 NCR3O14931 201 aa8.91□□□□□ -0.98
SMAD9-204ENST00000483941 COX6CP09669 75 aa8.91□□□□□ -0.98
SMAD9-204ENST00000483941 LINC00337Q8N6G1 96 aa8.91□□□□□ -0.98
SMAD9-204ENST00000483941 C9orf118A6NHY6 69 aa8.9□□□□□ -0.98
SMAD9-204ENST00000483941 TAX1BP3O14907 124 aa8.89□□□□□ -0.99
SMAD9-204ENST00000483941 IGLV6-57P01721 117 aa8.89□□□□□ -0.99
SMAD9-204ENST00000483941 PSMB2P49721 201 aa8.89□□□□□ -0.99
SMAD9-204ENST00000483941 KRTAP10-2P60368 255 aa8.89□□□□□ -0.99
SMAD9-204ENST00000483941 PRR3P79522 188 aaKnown RBP8.89□□□□□ -0.99
SMAD9-204ENST00000483941 SPACA4Q8TDM5 124 aa8.89□□□□□ -0.99
SMAD9-204ENST00000483941 C22orf24Q9Y442 160 aa8.89□□□□□ -0.99
SMAD9-204ENST00000483941 EPM2AB3EWF7 344 aa8.88□□□□□ -0.99
SMAD9-204ENST00000483941 H7C2G1 150 aa8.88□□□□□ -0.99
SMAD9-204ENST00000483941 VAMP3Q15836 100 aa8.88□□□□□ -0.99
SMAD9-204ENST00000483941 LINC01620Q4KN68 170 aa8.88□□□□□ -0.99
SMAD9-204ENST00000483941 FAM19A5Q7Z5A7 132 aaPredicted RBP8.88□□□□□ -0.99
SMAD9-204ENST00000483941 MRPL55Q7Z7F7 128 aaKnown RBP8.88□□□□□ -0.99
SMAD9-204ENST00000483941 M0QXV9 152 aa8.87□□□□□ -0.99
SMAD9-204ENST00000483941 TSPAN13O95857 204 aa8.87□□□□□ -0.99
SMAD9-204ENST00000483941 SERTAD4-AS1Q5TG53 156 aa8.87□□□□□ -0.99
SMAD9-204ENST00000483941 CHTF8P0CG12 524 aa8.86□□□□□ -0.99
SMAD9-204ENST00000483941 INAFM2P0DMQ5 153 aa8.86□□□□□ -0.99
SMAD9-204ENST00000483941 SCGB1C2P0DMR2 95 aa8.86□□□□□ -0.99
SMAD9-204ENST00000483941 RPL28P46779 137 aaKnown RBP8.86□□□□□ -0.99
SMAD9-204ENST00000483941 Q8NDZ9 215 aa8.86□□□□□ -0.99
SMAD9-204ENST00000483941 FAM168BA1KXE4 195 aa8.85□□□□□ -0.99
SMAD9-204ENST00000483941 H3BUT2 72 aa8.85□□□□□ -0.99
SMAD9-204ENST00000483941 SNCGO76070 127 aa8.85□□□□□ -0.99
SMAD9-204ENST00000483941 FABP2P12104 132 aa8.85□□□□□ -0.99
SMAD9-204ENST00000483941 C7orf33Q8WU49 177 aa8.85□□□□□ -0.99
SMAD9-204ENST00000483941 TRAV23DV6A0A075B6W5 121 aa8.84□□□□□ -0.99
SMAD9-204ENST00000483941 TRBV10-3A0A0K0K1G6 114 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms