RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 RPL24P83731 157 aaKnown RBP7.1□□□□□ -1.27
UBR4-213ENST00000483922 KRTAP4-16G5E9R7 235 aaPredicted RBP7.09□□□□□ -1.27
UBR4-213ENST00000483922 PMVKQ15126 192 aa7.09□□□□□ -1.27
UBR4-213ENST00000483922 SMCR5Q8TEV8 140 aa7.09□□□□□ -1.27
UBR4-213ENST00000483922 MRPL18Q9H0U6 180 aaKnown RBP7.09□□□□□ -1.27
UBR4-213ENST00000483922 FLGP20930 4061 aaPredicted RBP7.08□□□□□ -1.28
UBR4-213ENST00000483922 G0S2P27469 103 aa7.08□□□□□ -1.28
UBR4-213ENST00000483922 KRTAP10-6P60371 365 aaPredicted RBP7.08□□□□□ -1.28
UBR4-213ENST00000483922 COX17Q14061 63 aa7.07□□□□□ -1.28
UBR4-213ENST00000483922 LINC00483Q53H64 154 aa7.07□□□□□ -1.28
UBR4-213ENST00000483922 ANAPC16Q96DE5 110 aa7.07□□□□□ -1.28
UBR4-213ENST00000483922 IGLC3P0DOY3 106 aa7.06□□□□□ -1.28
UBR4-213ENST00000483922 ZNF22P17026 224 aaPredicted RBP7.06□□□□□ -1.28
UBR4-213ENST00000483922 SPRR1AP35321 89 aa7.06□□□□□ -1.28
UBR4-213ENST00000483922 A0A096LNJ9 63 aa7.04□□□□□ -1.28
UBR4-213ENST00000483922 H3BRM9 83 aa7.04□□□□□ -1.28
UBR4-213ENST00000483922 ERC2-IT1O76042 136 aa7.04□□□□□ -1.28
UBR4-213ENST00000483922 ZNF706Q9Y5V0 76 aaPredicted RBP7.04□□□□□ -1.28
UBR4-213ENST00000483922 MT-ND4LP03901 98 aa7.03□□□□□ -1.28
UBR4-213ENST00000483922 RPS29P62273 56 aaKnown RBP7.03□□□□□ -1.28
UBR4-213ENST00000483922 KCNQ1DNQ9H478 68 aa7.03□□□□□ -1.28
UBR4-213ENST00000483922 A0A0U1RRA0 63 aa7.02□□□□□ -1.29
UBR4-213ENST00000483922 MOBPQ13875 183 aa7.02□□□□□ -1.29
UBR4-213ENST00000483922 IGLV9-49A0A0B4J1Y8 123 aa7.01□□□□□ -1.29
UBR4-213ENST00000483922 A0A1B0GVG6 124 aa7.01□□□□□ -1.29
UBR4-213ENST00000483922 PRYO14603 147 aa7.01□□□□□ -1.29
UBR4-213ENST00000483922 CFC1BP0CG36 223 aa7.01□□□□□ -1.29
UBR4-213ENST00000483922 PCOTHQ58A44 107 aa7.01□□□□□ -1.29
UBR4-213ENST00000483922 GAGE2AQ6NT46 116 aa7.01□□□□□ -1.29
UBR4-213ENST00000483922 SSBP3-AS1Q7Z2R9 100 aa7.01□□□□□ -1.29
UBR4-213ENST00000483922 URB1-AS1Q96HZ7 61 aa7.01□□□□□ -1.29
UBR4-213ENST00000483922 SSPOA2VEC9 5147 aa7□□□□□ -1.29
UBR4-213ENST00000483922 C11orf86A6NJI1 115 aa7□□□□□ -1.29
UBR4-213ENST00000483922 SLC25A20O43772 301 aa7□□□□□ -1.29
UBR4-213ENST00000483922 IGLV8-61A0A075B6I0 122 aa6.99□□□□□ -1.29
UBR4-213ENST00000483922 LINC01549A6NIU2 74 aa6.99□□□□□ -1.29
UBR4-213ENST00000483922 B5MCH6 92 aa6.99□□□□□ -1.29
UBR4-213ENST00000483922 NCR3O14931 201 aa6.99□□□□□ -1.29
UBR4-213ENST00000483922 LINC00158P58513 81 aa6.99□□□□□ -1.29
UBR4-213ENST00000483922 NDUFA6P56556 154 aa6.98□□□□□ -1.29
UBR4-213ENST00000483922 Q9BRP9 147 aa6.98□□□□□ -1.29
UBR4-213ENST00000483922 NDUFA12Q9UI09 145 aa6.98□□□□□ -1.29
UBR4-213ENST00000483922 TRBV10-3A0A0K0K1G6 114 aa6.97□□□□□ -1.29
UBR4-213ENST00000483922 SMIM13P0DJ93 91 aa6.97□□□□□ -1.29
UBR4-213ENST00000483922 FAM19A2Q8N3H0 131 aa6.97□□□□□ -1.29
UBR4-213ENST00000483922 USH2AO75445 5202 aa6.96□□□□□ -1.29
UBR4-213ENST00000483922 BOD1L2Q8IYS8 172 aa6.96□□□□□ -1.3
UBR4-213ENST00000483922 ETDCA0A1B0GVM5 59 aa6.95□□□□□ -1.3
UBR4-213ENST00000483922 KRTAP9-7A8MTY7 169 aa6.95□□□□□ -1.3
UBR4-213ENST00000483922 TMEM170BQ5T4T1 132 aa6.95□□□□□ -1.3
UBR4-213ENST00000483922 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.94□□□□□ -1.3
UBR4-213ENST00000483922 PMCHL1Q16048 86 aa6.94□□□□□ -1.3
UBR4-213ENST00000483922 FA2HQ7L5A8 372 aa6.94□□□□□ -1.3
UBR4-213ENST00000483922 C9orf92A6NGG3 77 aa6.93□□□□□ -1.3
UBR4-213ENST00000483922 BAGE3Q86Y29 109 aa6.93□□□□□ -1.3
UBR4-213ENST00000483922 MIR7-3HGQ8N6C7 128 aa6.93□□□□□ -1.3
UBR4-213ENST00000483922 TMEM223A0PJW6 202 aa6.92□□□□□ -1.3
UBR4-213ENST00000483922 SFTA2Q6UW10 78 aa6.92□□□□□ -1.3
UBR4-213ENST00000483922 SMCO4Q9NRQ5 59 aa6.92□□□□□ -1.3
UBR4-213ENST00000483922 TRAV9-1A0A075B6T8 112 aa6.91□□□□□ -1.3
UBR4-213ENST00000483922 FABP9Q0Z7S8 132 aa6.9□□□□□ -1.3
UBR4-213ENST00000483922 LINC00614P0C842 121 aa6.89□□□□□ -1.31
UBR4-213ENST00000483922 ST20-AS1Q8NBB2 130 aa6.89□□□□□ -1.31
UBR4-213ENST00000483922 M0R2T5 61 aa6.88□□□□□ -1.31
UBR4-213ENST00000483922 HBDP02042 147 aa6.88□□□□□ -1.31
UBR4-213ENST00000483922 Q6ZRX8 168 aa6.88□□□□□ -1.31
UBR4-213ENST00000483922 C18orf32Q8TCD1 76 aa6.88□□□□□ -1.31
UBR4-213ENST00000483922 CHTOPQ9Y3Y2 248 aaKnown RBP6.88□□□□□ -1.31
UBR4-213ENST00000483922 C9orf153Q5TBE3 101 aa6.87□□□□□ -1.31
UBR4-213ENST00000483922 LOC107984156A0A0G2JMH3 177 aa6.86□□□□□ -1.31
UBR4-213ENST00000483922 DDTP30046 118 aa6.86□□□□□ -1.31
UBR4-213ENST00000483922 MEIG1Q5JSS6 88 aa6.86□□□□□ -1.31
UBR4-213ENST00000483922 ARL17AQ8IVW1 177 aa6.86□□□□□ -1.31
UBR4-213ENST00000483922 HRCT1Q6UXD1 115 aa6.85□□□□□ -1.31
UBR4-213ENST00000483922 ATP6V1G1O75348 118 aa6.84□□□□□ -1.31
UBR4-213ENST00000483922 IGLV6-57P01721 117 aa6.84□□□□□ -1.31
UBR4-213ENST00000483922 TMEM218A2RU14 115 aa6.83□□□□□ -1.32
UBR4-213ENST00000483922 EIF4EBP3O60516 100 aaPredicted RBP6.83□□□□□ -1.32
UBR4-213ENST00000483922 TSPEAR-AS2P59090 65 aa6.83□□□□□ -1.32
UBR4-213ENST00000483922 FCGBPQ9Y6R7 5405 aaPredicted RBP6.83□□□□□ -1.32
UBR4-213ENST00000483922 TRBV10-2A0A0K0K1G8 114 aa6.82□□□□□ -1.32
UBR4-213ENST00000483922 HERV-K104P63124 156 aa6.82□□□□□ -1.32
UBR4-213ENST00000483922 RPS10P5Q9NQ39 176 aa6.82□□□□□ -1.32
UBR4-213ENST00000483922 TRAV12-1A0A0B4J245 112 aa6.81□□□□□ -1.32
UBR4-213ENST00000483922 S100PP25815 95 aa6.81□□□□□ -1.32
UBR4-213ENST00000483922 COX19Q49B96 90 aa6.81□□□□□ -1.32
UBR4-213ENST00000483922 SEC11CQ9BY50 192 aa6.81□□□□□ -1.32
UBR4-213ENST00000483922 SPRR1BP22528 89 aa6.8□□□□□ -1.32
UBR4-213ENST00000483922 RPL37P61927 97 aaKnown RBP6.79□□□□□ -1.32
UBR4-213ENST00000483922 CLLU1Q5K131 121 aa6.79□□□□□ -1.32
UBR4-213ENST00000483922 SOSTDC1Q6X4U4 206 aa6.79□□□□□ -1.32
UBR4-213ENST00000483922 TRAV23DV6A0A075B6W5 121 aa6.78□□□□□ -1.32
UBR4-213ENST00000483922 MYMXA0A1B0GTQ4 84 aa6.78□□□□□ -1.32
UBR4-213ENST00000483922 S100A12P80511 92 aa6.78□□□□□ -1.32
UBR4-213ENST00000483922 LIMD2Q9BT23 127 aa6.78□□□□□ -1.32
UBR4-213ENST00000483922 TRAPPC1Q9Y5R8 145 aa6.78□□□□□ -1.32
UBR4-213ENST00000483922 LINC00587B1AMM8 73 aa6.77□□□□□ -1.33
UBR4-213ENST00000483922 ZNF73O43830 326 aaPredicted RBP6.77□□□□□ -1.33
UBR4-213ENST00000483922 COX6B2Q6YFQ2 88 aa6.77□□□□□ -1.33
UBR4-213ENST00000483922 IFI27L1Q96BM0 104 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms