RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 CYSLTR1Q9Y271 337 aa3.46□□□□□ -1.86
CSDE1-207ENST00000483407 LOC389332A0A1B0GUA5 103 aa3.45□□□□□ -1.86
CSDE1-207ENST00000483407 BCE1O60756 84 aa3.45□□□□□ -1.86
CSDE1-207ENST00000483407 SEC11AP67812 179 aa3.45□□□□□ -1.86
CSDE1-207ENST00000483407 PEA15Q15121 130 aa3.45□□□□□ -1.86
CSDE1-207ENST00000483407 C2orf66Q6UXQ4 117 aa3.45□□□□□ -1.86
CSDE1-207ENST00000483407 ATP5L2Q7Z4Y8 100 aa3.45□□□□□ -1.86
CSDE1-207ENST00000483407 OCR1Q9BZK8 76 aa3.45□□□□□ -1.86
CSDE1-207ENST00000483407 MAP1LC3AQ9H492 121 aa3.45□□□□□ -1.86
CSDE1-207ENST00000483407 LAMTOR2Q9Y2Q5 125 aa3.45□□□□□ -1.86
CSDE1-207ENST00000483407 F8VRH5 84 aa3.44□□□□□ -1.86
CSDE1-207ENST00000483407 CXCL5P42830 114 aa3.44□□□□□ -1.86
CSDE1-207ENST00000483407 HERVK_113P63121 156 aa3.44□□□□□ -1.86
CSDE1-207ENST00000483407 ORMDL2Q53FV1 153 aa3.44□□□□□ -1.86
CSDE1-207ENST00000483407 Q8N8P6 123 aa3.44□□□□□ -1.86
CSDE1-207ENST00000483407 AMELXQ99217 191 aa3.44□□□□□ -1.86
CSDE1-207ENST00000483407 GEMIN7Q9H840 131 aaKnown RBP3.44□□□□□ -1.86
CSDE1-207ENST00000483407 NDUFAF8A1L188 74 aa3.43□□□□□ -1.86
CSDE1-207ENST00000483407 C9JQL5 133 aa3.43□□□□□ -1.86
CSDE1-207ENST00000483407 K7EMI3 77 aa3.43□□□□□ -1.86
CSDE1-207ENST00000483407 G0S2P27469 103 aa3.43□□□□□ -1.86
CSDE1-207ENST00000483407 UBE2AP49459 152 aa3.43□□□□□ -1.86
CSDE1-207ENST00000483407 LINC00173Q6ZV60 143 aa3.43□□□□□ -1.86
CSDE1-207ENST00000483407 FAM19A3Q7Z5A8 133 aa3.43□□□□□ -1.86
CSDE1-207ENST00000483407 IGIPA6NJ69 53 aa3.42□□□□□ -1.86
CSDE1-207ENST00000483407 RPL37AP8A6NKH3 93 aa3.42□□□□□ -1.86
CSDE1-207ENST00000483407 MT3P25713 68 aa3.42□□□□□ -1.86
CSDE1-207ENST00000483407 LINC00304Q8N9R0 145 aa3.42□□□□□ -1.86
CSDE1-207ENST00000483407 NKAPP1Q8N9T2 125 aa3.42□□□□□ -1.86
CSDE1-207ENST00000483407 LINC00167Q96N53 147 aa3.42□□□□□ -1.86
CSDE1-207ENST00000483407 NXT2Q9NPJ8 142 aaKnown RBP3.42□□□□□ -1.86
CSDE1-207ENST00000483407 CDKN2A-AS1Q9UH64 79 aa3.42□□□□□ -1.86
CSDE1-207ENST00000483407 IGKV2D-26A0A0A0MRZ7 120 aa3.41□□□□□ -1.86
CSDE1-207ENST00000483407 CTAG1AP78358 180 aa3.41□□□□□ -1.86
CSDE1-207ENST00000483407 TPRXLQ17RH7 258 aa3.41□□□□□ -1.86
CSDE1-207ENST00000483407 FAM229BQ4G0N7 80 aa3.41□□□□□ -1.86
CSDE1-207ENST00000483407 TIMM17AQ99595 171 aa3.41□□□□□ -1.86
CSDE1-207ENST00000483407 RETNLBQ9BQ08 111 aa3.41□□□□□ -1.86
CSDE1-207ENST00000483407 ANAPC11Q9NYG5 84 aa3.41□□□□□ -1.86
CSDE1-207ENST00000483407 KRTAP10-6P60371 365 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-207ENST00000483407 KRTAP13-2Q52LG2 175 aa3.4□□□□□ -1.87
CSDE1-207ENST00000483407 PDZD11Q5EBL8 140 aa3.4□□□□□ -1.87
CSDE1-207ENST00000483407 COX7B2Q8TF08 81 aa3.4□□□□□ -1.87
CSDE1-207ENST00000483407 IGKV2-28A0A075B6P5 120 aa3.39□□□□□ -1.87
CSDE1-207ENST00000483407 TINCRA0A1B0GVN0 87 aa3.39□□□□□ -1.87
CSDE1-207ENST00000483407 LINC01549A6NIU2 74 aa3.39□□□□□ -1.87
CSDE1-207ENST00000483407 ATP5LO75964 103 aa3.39□□□□□ -1.87
CSDE1-207ENST00000483407 IGKV2D-28P01615 120 aa3.39□□□□□ -1.87
CSDE1-207ENST00000483407 MT-ND4LP03901 98 aa3.39□□□□□ -1.87
CSDE1-207ENST00000483407 RAB5BP61020 215 aa3.39□□□□□ -1.87
CSDE1-207ENST00000483407 KRTAP13-1Q8IUC0 172 aa3.39□□□□□ -1.87
CSDE1-207ENST00000483407 Q8N377 158 aa3.39□□□□□ -1.87
CSDE1-207ENST00000483407 TOMM6Q96B49 74 aa3.39□□□□□ -1.87
CSDE1-207ENST00000483407 SCGB3A1Q96QR1 104 aa3.39□□□□□ -1.87
CSDE1-207ENST00000483407 H3BRM9 83 aa3.38□□□□□ -1.87
CSDE1-207ENST00000483407 FAM19A1Q7Z5A9 133 aa3.38□□□□□ -1.87
CSDE1-207ENST00000483407 PPDPFQ9H3Y8 114 aa3.38□□□□□ -1.87
CSDE1-207ENST00000483407 KRTAP16-1A8MUX0 517 aa3.37□□□□□ -1.87
CSDE1-207ENST00000483407 SPINK8P0C7L1 97 aa3.37□□□□□ -1.87
CSDE1-207ENST00000483407 PRLHP81277 87 aa3.37□□□□□ -1.87
CSDE1-207ENST00000483407 SPAG11AQ6PDA7 123 aa3.37□□□□□ -1.87
CSDE1-207ENST00000483407 GNB1LQ9BYB4 327 aa3.37□□□□□ -1.87
CSDE1-207ENST00000483407 TMEM126AQ9H061 195 aa3.37□□□□□ -1.87
CSDE1-207ENST00000483407 SCO1O75880 301 aa3.36□□□□□ -1.87
CSDE1-207ENST00000483407 ADCYAP1P18509 176 aa3.36□□□□□ -1.87
CSDE1-207ENST00000483407 PFN2P35080 140 aa3.36□□□□□ -1.87
CSDE1-207ENST00000483407 PMVKQ15126 192 aa3.36□□□□□ -1.87
CSDE1-207ENST00000483407 FP248Q71RG6 208 aaPredicted RBP3.36□□□□□ -1.87
CSDE1-207ENST00000483407 CBLN2Q8IUK8 224 aa3.36□□□□□ -1.87
CSDE1-207ENST00000483407 LINC00337Q8N6G1 96 aa3.36□□□□□ -1.87
CSDE1-207ENST00000483407 CST9LQ9H4G1 147 aa3.36□□□□□ -1.87
CSDE1-207ENST00000483407 TMEM238C9JI98 176 aa3.35□□□□□ -1.87
CSDE1-207ENST00000483407 M0R378 163 aa3.35□□□□□ -1.87
CSDE1-207ENST00000483407 RAB14P61106 215 aa3.35□□□□□ -1.87
CSDE1-207ENST00000483407 COX17Q14061 63 aa3.35□□□□□ -1.87
CSDE1-207ENST00000483407 PLEKHB2Q96CS7 222 aa3.35□□□□□ -1.87
CSDE1-207ENST00000483407 HIGD2AQ9BW72 106 aa3.35□□□□□ -1.87
CSDE1-207ENST00000483407 SND1-IT1Q9HBX3 110 aa3.35□□□□□ -1.87
CSDE1-207ENST00000483407 SMCO4Q9NRQ5 59 aa3.35□□□□□ -1.87
CSDE1-207ENST00000483407 ERG28Q9UKR5 140 aa3.35□□□□□ -1.87
CSDE1-207ENST00000483407 ZNF706Q9Y5V0 76 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-207ENST00000483407 SFTA2Q6UW10 78 aa3.34□□□□□ -1.87
CSDE1-207ENST00000483407 FA2HQ7L5A8 372 aa3.34□□□□□ -1.87
CSDE1-207ENST00000483407 C3orf22Q8N5N4 141 aa3.34□□□□□ -1.87
CSDE1-207ENST00000483407 TRAV9-1A0A075B6T8 112 aa3.33□□□□□ -1.88
CSDE1-207ENST00000483407 LINC01546A6NGU7 62 aa3.33□□□□□ -1.88
CSDE1-207ENST00000483407 IGLC3P0DOY3 106 aa3.33□□□□□ -1.88
CSDE1-207ENST00000483407 NDUFA6P56556 154 aa3.33□□□□□ -1.88
CSDE1-207ENST00000483407 ZNF625Q96I27 306 aaPredicted RBP3.33□□□□□ -1.88
CSDE1-207ENST00000483407 SPRR4Q96PI1 79 aa3.33□□□□□ -1.88
CSDE1-207ENST00000483407 SPINK1P00995 79 aa3.32□□□□□ -1.88
CSDE1-207ENST00000483407 ZNF22P17026 224 aaPredicted RBP3.32□□□□□ -1.88
CSDE1-207ENST00000483407 S100PP25815 95 aa3.32□□□□□ -1.88
CSDE1-207ENST00000483407 KRTAP13-3Q3SY46 172 aa3.32□□□□□ -1.88
CSDE1-207ENST00000483407 ASB16-AS1Q495Z4 193 aa3.32□□□□□ -1.88
CSDE1-207ENST00000483407 COX19Q49B96 90 aa3.32□□□□□ -1.88
CSDE1-207ENST00000483407 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
CSDE1-207ENST00000483407 NDUFA12Q9UI09 145 aa3.32□□□□□ -1.88
CSDE1-207ENST00000483407 A0A1B0GVG6 124 aa3.31□□□□□ -1.88
CSDE1-207ENST00000483407 LINC00158P58513 81 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms