RNA–Protein interactions for RNA: ENST00000483290.5

COMMD6-210, Transcript of COMM domain containing 6, humanhuman

TSL 2

Gene COMMD6, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-210ENST00000483290 PIGYQ3MUY2 71 aa3.26□□□□□ -1.89
COMMD6-210ENST00000483290 Q96NJ1 140 aa3.26□□□□□ -1.89
COMMD6-210ENST00000483290 COL4A4P53420 1690 aaPredicted RBP3.25□□□□□ -1.89
COMMD6-210ENST00000483290 A0A0J9YWU9 116 aa3.25□□□□□ -1.89
COMMD6-210ENST00000483290 CRIP1P50238 77 aa3.25□□□□□ -1.89
COMMD6-210ENST00000483290 R4GN34 69 aa3.25□□□□□ -1.89
COMMD6-210ENST00000483290 DEFB106AQ8N104 65 aa3.24□□□□□ -1.89
COMMD6-210ENST00000483290 ARHGAP32A7KAX9 2087 aa3.24□□□□□ -1.89
COMMD6-210ENST00000483290 MDC1Q14676 2089 aaKnown RBP3.24□□□□□ -1.89
COMMD6-210ENST00000483290 ZFHX3Q15911 3703 aa3.24□□□□□ -1.89
COMMD6-210ENST00000483290 SDK2Q58EX2 2172 aa3.24□□□□□ -1.89
COMMD6-210ENST00000483290 NUP214P35658 2090 aaPredicted RBP3.23□□□□□ -1.89
COMMD6-210ENST00000483290 DNAJC13O75165 2243 aa3.23□□□□□ -1.89
COMMD6-210ENST00000483290 PRCDQ00LT1 54 aa3.23□□□□□ -1.89
COMMD6-210ENST00000483290 LINC00304Q8N9R0 145 aa3.23□□□□□ -1.89
COMMD6-210ENST00000483290 SPTY2D1-AS1A0A0U1RR47 76 aa3.22□□□□□ -1.89
COMMD6-210ENST00000483290 SSBP3-AS1Q7Z2R9 100 aa3.22□□□□□ -1.89
COMMD6-210ENST00000483290 Q8IZM0 81 aa3.22□□□□□ -1.89
COMMD6-210ENST00000483290 LINC00612Q8N6U2 182 aa3.22□□□□□ -1.89
COMMD6-210ENST00000483290 Q8N9L7 120 aa3.22□□□□□ -1.89
COMMD6-210ENST00000483290 CCL19Q99731 98 aa3.22□□□□□ -1.89
COMMD6-210ENST00000483290 A0A0G2JQZ4 141 aa3.21□□□□□ -1.9
COMMD6-210ENST00000483290 C10orf55Q5SWW7 151 aa3.21□□□□□ -1.9
COMMD6-210ENST00000483290 KIAA0100Q14667 2235 aaKnown RBP3.2□□□□□ -1.9
COMMD6-210ENST00000483290 RPL39LQ96EH5 51 aaKnown RBP3.2□□□□□ -1.9
COMMD6-210ENST00000483290 CCL26Q9Y258 94 aa3.2□□□□□ -1.9
COMMD6-210ENST00000483290 COL4A5P29400 1685 aa3.2□□□□□ -1.9
COMMD6-210ENST00000483290 DIDO1Q9BTC0 2240 aaKnown RBP3.19□□□□□ -1.9
COMMD6-210ENST00000483290 CUL9Q8IWT3 2517 aa3.19□□□□□ -1.9
COMMD6-210ENST00000483290 IGLV6-57P01721 117 aa3.19□□□□□ -1.9
COMMD6-210ENST00000483290 POLR2KP53803 58 aaKnown RBP3.19□□□□□ -1.9
COMMD6-210ENST00000483290 KRTAP10-8P60410 259 aa3.19□□□□□ -1.9
COMMD6-210ENST00000483290 RPL39P62891 51 aaKnown RBP3.19□□□□□ -1.9
COMMD6-210ENST00000483290 DEFB134Q4QY38 66 aa3.19□□□□□ -1.9
COMMD6-210ENST00000483290 MED12Q93074 2177 aa3.19□□□□□ -1.9
COMMD6-210ENST00000483290 ESPL1Q14674 2120 aa3.19□□□□□ -1.9
COMMD6-210ENST00000483290 IGKV2-28A0A075B6P5 120 aa3.18□□□□□ -1.9
COMMD6-210ENST00000483290 IGKV2D-24A0A075B6R9 120 aa3.18□□□□□ -1.9
COMMD6-210ENST00000483290 IGKV2D-28P01615 120 aa3.18□□□□□ -1.9
COMMD6-210ENST00000483290 LINC00575Q6W349 94 aa3.18□□□□□ -1.9
COMMD6-210ENST00000483290 CDKN2A-AS1Q9UH64 79 aa3.18□□□□□ -1.9
COMMD6-210ENST00000483290 ANGP03950 147 aaKnown RBP3.17□□□□□ -1.9
COMMD6-210ENST00000483290 HRES1P13985 223 aa3.17□□□□□ -1.9
COMMD6-210ENST00000483290 LINC00315P59091 139 aa3.17□□□□□ -1.9
COMMD6-210ENST00000483290 ANAPC11Q9NYG5 84 aa3.17□□□□□ -1.9
COMMD6-210ENST00000483290 M0R2N4 97 aa3.16□□□□□ -1.9
COMMD6-210ENST00000483290 LY6G6CO95867 125 aa3.16□□□□□ -1.9
COMMD6-210ENST00000483290 H3BRN7 92 aa3.15□□□□□ -1.91
COMMD6-210ENST00000483290 ADAMTS9Q9P2N4 1935 aa3.15□□□□□ -1.91
COMMD6-210ENST00000483290 C14orf177Q52M58 125 aa3.14□□□□□ -1.91
COMMD6-210ENST00000483290 SPACA4Q8TDM5 124 aa3.14□□□□□ -1.91
COMMD6-210ENST00000483290 PRRC2AP48634 2157 aaKnown RBP3.14□□□□□ -1.91
COMMD6-210ENST00000483290 TPRXLQ17RH7 258 aa3.13□□□□□ -1.91
COMMD6-210ENST00000483290 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.13□□□□□ -1.91
COMMD6-210ENST00000483290 KRTAP11-1Q8IUC1 163 aa3.13□□□□□ -1.91
COMMD6-210ENST00000483290 TP53AIP1Q9HCN2 124 aa3.13□□□□□ -1.91
COMMD6-210ENST00000483290 GOLGA4Q13439 2230 aaKnown RBP3.13□□□□□ -1.91
COMMD6-210ENST00000483290 KMT2BQ9UMN6 2715 aaPredicted RBP3.13□□□□□ -1.91
COMMD6-210ENST00000483290 FREM1Q5H8C1 2179 aa3.12□□□□□ -1.91
COMMD6-210ENST00000483290 DOCK10Q96BY6 2186 aa3.11□□□□□ -1.91
COMMD6-210ENST00000483290 PRRC2BQ5JSZ5 2229 aaKnown RBP3.11□□□□□ -1.91
COMMD6-210ENST00000483290 MINOS1Q5TGZ0 78 aa3.11□□□□□ -1.91
COMMD6-210ENST00000483290 CACNA1DQ01668 2161 aa3.11□□□□□ -1.91
COMMD6-210ENST00000483290 SPAG17Q6Q759 2223 aa3.11□□□□□ -1.91
COMMD6-210ENST00000483290 INE1O15225 51 aa3.1□□□□□ -1.91
COMMD6-210ENST00000483290 Q6ZRX8 168 aa3.1□□□□□ -1.91
COMMD6-210ENST00000483290 LEAP2Q969E1 77 aa3.1□□□□□ -1.91
COMMD6-210ENST00000483290 PRO3102Q9H379 93 aa3.1□□□□□ -1.91
COMMD6-210ENST00000483290 K7EQZ3 153 aa3.09□□□□□ -1.91
COMMD6-210ENST00000483290 C6orf48Q9UBA6 75 aa3.08□□□□□ -1.92
COMMD6-210ENST00000483290 TNCP24821 2201 aa3.08□□□□□ -1.92
COMMD6-210ENST00000483290 SDK1Q7Z5N4 2213 aa3.08□□□□□ -1.92
COMMD6-210ENST00000483290 G3V318 75 aa3.07□□□□□ -1.92
COMMD6-210ENST00000483290 COL27A1Q8IZC6 1860 aaPredicted RBP3.07□□□□□ -1.92
COMMD6-210ENST00000483290 A0A096LNT2 108 aa3.06□□□□□ -1.92
COMMD6-210ENST00000483290 DSCR10P59022 87 aa3.06□□□□□ -1.92
COMMD6-210ENST00000483290 PCOTHQ58A44 107 aa3.06□□□□□ -1.92
COMMD6-210ENST00000483290 WFDC10BQ8IUB3 73 aa3.06□□□□□ -1.92
COMMD6-210ENST00000483290 WFDC13Q8IUB5 93 aa3.06□□□□□ -1.92
COMMD6-210ENST00000483290 COL4A2P08572 1712 aa3.05□□□□□ -1.92
COMMD6-210ENST00000483290 LYNX1G3V0Z9 82 aa3.05□□□□□ -1.92
COMMD6-210ENST00000483290 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
COMMD6-210ENST00000483290 PLAC4Q8WY50 150 aa3.05□□□□□ -1.92
COMMD6-210ENST00000483290 CRIPTQ9P021 101 aa3.05□□□□□ -1.92
COMMD6-210ENST00000483290 KRTAP12-2P59991 146 aa3.04□□□□□ -1.92
COMMD6-210ENST00000483290 GVQW2A0A096LPI5 108 aaPredicted RBP3.03□□□□□ -1.92
COMMD6-210ENST00000483290 M0QY20 66 aa3.03□□□□□ -1.92
COMMD6-210ENST00000483290 KRTAP5-5Q701N2 237 aaPredicted RBP3.03□□□□□ -1.92
COMMD6-210ENST00000483290 KRTAP7-1Q8IUC3 87 aa3.03□□□□□ -1.92
COMMD6-210ENST00000483290 TMEM167AQ8TBQ9 72 aa3.03□□□□□ -1.92
COMMD6-210ENST00000483290 ABCA4P78363 2273 aa3.02□□□□□ -1.93
COMMD6-210ENST00000483290 I3L2K1 104 aa3.02□□□□□ -1.93
COMMD6-210ENST00000483290 IGKV2-24A0A0C4DH68 120 aa3.01□□□□□ -1.93
COMMD6-210ENST00000483290 IGLV5-48A0A075B6I7 105 aa3□□□□□ -1.93
COMMD6-210ENST00000483290 SRCAPQ6ZRS2 3230 aa3□□□□□ -1.93
COMMD6-210ENST00000483290 SHANK1Q9Y566 2161 aa3□□□□□ -1.93
COMMD6-210ENST00000483290 WT1-ASQ06250 92 aa2.99□□□□□ -1.93
COMMD6-210ENST00000483290 RPL39P5Q59GN2 51 aa2.99□□□□□ -1.93
COMMD6-210ENST00000483290 SEC16AO15027 2179 aa2.99□□□□□ -1.93
COMMD6-210ENST00000483290 ALPK2Q86TB3 2170 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms