RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 NDUFV3P56181 108 aaKnown RBP4.47□□□□□ -1.69
CSDE1-206ENST00000483030 RPL18AQ02543 176 aaKnown RBP4.47□□□□□ -1.69
CSDE1-206ENST00000483030 ADIRFQ15847 76 aa4.47□□□□□ -1.69
CSDE1-206ENST00000483030 PRR4Q16378 134 aa4.47□□□□□ -1.69
CSDE1-206ENST00000483030 LCE4AQ5TA78 99 aa4.47□□□□□ -1.69
CSDE1-206ENST00000483030 ST20Q9HBF5 79 aa4.47□□□□□ -1.69
CSDE1-206ENST00000483030 A0A087WZ39 114 aa4.46□□□□□ -1.7
CSDE1-206ENST00000483030 TRBV6-5A0A0K0K1A5 114 aa4.46□□□□□ -1.7
CSDE1-206ENST00000483030 F8W1H4 67 aa4.46□□□□□ -1.7
CSDE1-206ENST00000483030 IFITM1P13164 125 aa4.46□□□□□ -1.7
CSDE1-206ENST00000483030 C5orf38Q86SI9 138 aa4.46□□□□□ -1.7
CSDE1-206ENST00000483030 MUC2Q02817 5179 aa4.45□□□□□ -1.7
CSDE1-206ENST00000483030 TRAV13-1A0A0B4J241 112 aa4.45□□□□□ -1.7
CSDE1-206ENST00000483030 FAM236DA0A1B0GTK5 79 aa4.45□□□□□ -1.7
CSDE1-206ENST00000483030 KRTAP23-1A1A580 65 aa4.45□□□□□ -1.7
CSDE1-206ENST00000483030 H0Y9J4 135 aa4.45□□□□□ -1.7
CSDE1-206ENST00000483030 FAM236CP0DP71 79 aa4.45□□□□□ -1.7
CSDE1-206ENST00000483030 POLR2KP53803 58 aaKnown RBP4.45□□□□□ -1.7
CSDE1-206ENST00000483030 SEC11AP67812 179 aa4.45□□□□□ -1.7
CSDE1-206ENST00000483030 PMAIP1Q13794 54 aa4.45□□□□□ -1.7
CSDE1-206ENST00000483030 RNASE13Q5GAN3 156 aaKnown RBP4.45□□□□□ -1.7
CSDE1-206ENST00000483030 Q6ZUT4 128 aa4.45□□□□□ -1.7
CSDE1-206ENST00000483030 KRTAP11-1Q8IUC1 163 aa4.45□□□□□ -1.7
CSDE1-206ENST00000483030 C2orf48Q96LS8 159 aa4.45□□□□□ -1.7
CSDE1-206ENST00000483030 NAA38Q9BRA0 125 aaKnown RBP4.45□□□□□ -1.7
CSDE1-206ENST00000483030 PAM16Q9Y3D7 125 aa4.45□□□□□ -1.7
CSDE1-206ENST00000483030 IGLV1-50A0A075B6I6 118 aa4.44□□□□□ -1.7
CSDE1-206ENST00000483030 TRBV27A0A0K0K1C4 114 aa4.44□□□□□ -1.7
CSDE1-206ENST00000483030 A0A0U1RQV1 116 aa4.44□□□□□ -1.7
CSDE1-206ENST00000483030 FAM168BA1KXE4 195 aa4.44□□□□□ -1.7
CSDE1-206ENST00000483030 TMEM250H0YL14 139 aa4.44□□□□□ -1.7
CSDE1-206ENST00000483030 H3BRM9 83 aa4.44□□□□□ -1.7
CSDE1-206ENST00000483030 KRTAP1-4P0C5Y4 121 aa4.44□□□□□ -1.7
CSDE1-206ENST00000483030 SPAG11BQ08648 103 aa4.44□□□□□ -1.7
CSDE1-206ENST00000483030 PNRC1Q12796 327 aaPredicted RBP4.44□□□□□ -1.7
CSDE1-206ENST00000483030 SPATA45Q537H7 98 aa4.44□□□□□ -1.7
CSDE1-206ENST00000483030 HRCT1Q6UXD1 115 aa4.44□□□□□ -1.7
CSDE1-206ENST00000483030 Q6ZVH6 145 aa4.44□□□□□ -1.7
CSDE1-206ENST00000483030 TMEM191AQ9H0A3 160 aa4.44□□□□□ -1.7
CSDE1-206ENST00000483030 A8MWL6 223 aa4.43□□□□□ -1.7
CSDE1-206ENST00000483030 DPM2O94777 84 aa4.43□□□□□ -1.7
CSDE1-206ENST00000483030 FCER1GP30273 86 aa4.43□□□□□ -1.7
CSDE1-206ENST00000483030 UBE2D1P51668 147 aa4.43□□□□□ -1.7
CSDE1-206ENST00000483030 PMCHL1Q16048 86 aa4.43□□□□□ -1.7
CSDE1-206ENST00000483030 Q5XG85 94 aa4.43□□□□□ -1.7
CSDE1-206ENST00000483030 TSKUQ8WUA8 353 aa4.43□□□□□ -1.7
CSDE1-206ENST00000483030 UBE2D4Q9Y2X8 147 aa4.43□□□□□ -1.7
CSDE1-206ENST00000483030 SMKR1H3BMG3 65 aa4.42□□□□□ -1.7
CSDE1-206ENST00000483030 KIAA1644Q3SXP7 199 aa4.42□□□□□ -1.7
CSDE1-206ENST00000483030 BVES-AS1Q5T3Y7 98 aa4.42□□□□□ -1.7
CSDE1-206ENST00000483030 C10orf25Q5T742 122 aa4.42□□□□□ -1.7
CSDE1-206ENST00000483030 MRPL35Q9NZE8 188 aaKnown RBP4.42□□□□□ -1.7
CSDE1-206ENST00000483030 A0A1B0GUT8 65 aa4.41□□□□□ -1.7
CSDE1-206ENST00000483030 NDUFA1O15239 70 aa4.41□□□□□ -1.7
CSDE1-206ENST00000483030 UNQ6190/PRO20217Q6UXQ8 127 aa4.41□□□□□ -1.7
CSDE1-206ENST00000483030 MRPL55Q7Z7F7 128 aaKnown RBP4.41□□□□□ -1.7
CSDE1-206ENST00000483030 KRTAP7-1Q8IUC3 87 aa4.41□□□□□ -1.7
CSDE1-206ENST00000483030 AMN1Q8IY45 258 aa4.41□□□□□ -1.7
CSDE1-206ENST00000483030 LAMTOR3Q9UHA4 124 aa4.41□□□□□ -1.7
CSDE1-206ENST00000483030 IGHV3OR16-9A0A0B4J2B5 98 aa4.4□□□□□ -1.71
CSDE1-206ENST00000483030 HIGD1CA8MV81 97 aa4.4□□□□□ -1.71
CSDE1-206ENST00000483030 MT-ATP8P03928 68 aa4.4□□□□□ -1.71
CSDE1-206ENST00000483030 TLX1NBP0CAT3 122 aa4.4□□□□□ -1.71
CSDE1-206ENST00000483030 UBE2BP63146 152 aa4.4□□□□□ -1.71
CSDE1-206ENST00000483030 ATOH7Q8N100 152 aa4.4□□□□□ -1.71
CSDE1-206ENST00000483030 PMCHL2Q9BQD1 86 aa4.4□□□□□ -1.71
CSDE1-206ENST00000483030 TIMM21Q9BVV7 248 aa4.4□□□□□ -1.71
CSDE1-206ENST00000483030 C6orf48Q9UBA6 75 aa4.4□□□□□ -1.71
CSDE1-206ENST00000483030 J3QQQ9 107 aa4.39□□□□□ -1.71
CSDE1-206ENST00000483030 PPP1R17O96001 155 aa4.39□□□□□ -1.71
CSDE1-206ENST00000483030 TMEM258P61165 79 aa4.39□□□□□ -1.71
CSDE1-206ENST00000483030 HERVK_113P63121 156 aa4.39□□□□□ -1.71
CSDE1-206ENST00000483030 NRACQ8N912 160 aa4.39□□□□□ -1.71
CSDE1-206ENST00000483030 SPCS1Q9Y6A9 102 aa4.39□□□□□ -1.71
CSDE1-206ENST00000483030 FAM240AA0A1B0GVK7 77 aa4.38□□□□□ -1.71
CSDE1-206ENST00000483030 C9JQL5 133 aa4.38□□□□□ -1.71
CSDE1-206ENST00000483030 FABP2P12104 132 aa4.38□□□□□ -1.71
CSDE1-206ENST00000483030 RPL39P62891 51 aaKnown RBP4.38□□□□□ -1.71
CSDE1-206ENST00000483030 LYRM7Q5U5X0 104 aa4.38□□□□□ -1.71
CSDE1-206ENST00000483030 FAM104AQ969W3 186 aa4.38□□□□□ -1.71
CSDE1-206ENST00000483030 A0A1W2PPM0 123 aa4.37□□□□□ -1.71
CSDE1-206ENST00000483030 UQCRQO14949 82 aa4.37□□□□□ -1.71
CSDE1-206ENST00000483030 ZNF861PO60384 105 aa4.37□□□□□ -1.71
CSDE1-206ENST00000483030 PFN2P35080 140 aa4.37□□□□□ -1.71
CSDE1-206ENST00000483030 RIGQ13278 110 aa4.37□□□□□ -1.71
CSDE1-206ENST00000483030 KIAA0087Q14695 138 aa4.37□□□□□ -1.71
CSDE1-206ENST00000483030 LCE5AQ5TCM9 118 aa4.37□□□□□ -1.71
CSDE1-206ENST00000483030 C3orf22Q8N5N4 141 aa4.37□□□□□ -1.71
CSDE1-206ENST00000483030 C18orf32Q8TCD1 76 aa4.37□□□□□ -1.71
CSDE1-206ENST00000483030 RAB37Q96AX2 223 aa4.37□□□□□ -1.71
CSDE1-206ENST00000483030 NMUP48645 174 aa4.36□□□□□ -1.71
CSDE1-206ENST00000483030 LINC00310P59036 64 aa4.36□□□□□ -1.71
CSDE1-206ENST00000483030 HBBP68871 147 aa4.36□□□□□ -1.71
CSDE1-206ENST00000483030 MRPL51Q4U2R6 128 aaKnown RBP4.36□□□□□ -1.71
CSDE1-206ENST00000483030 C9orf129Q5T035 196 aaKnown RBP4.36□□□□□ -1.71
CSDE1-206ENST00000483030 C9orf153Q5TBE3 101 aa4.36□□□□□ -1.71
CSDE1-206ENST00000483030 C2orf82Q6UX34 121 aa4.36□□□□□ -1.71
CSDE1-206ENST00000483030 LINC01561Q8N1V8 128 aa4.36□□□□□ -1.71
CSDE1-206ENST00000483030 C20orf78Q9BR46 151 aa4.36□□□□□ -1.71
CSDE1-206ENST00000483030 OSTCQ9NRP0 149 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 206.5 ms