RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 C10orf91Q5T1B1 145 aa9.62□□□□□ -0.87
RAB11FIP3-209ENST00000483002 Q8NDZ9 215 aa9.62□□□□□ -0.87
RAB11FIP3-209ENST00000483002 CBLN2Q8IUK8 224 aa9.6□□□□□ -0.87
RAB11FIP3-209ENST00000483002 PLEKHB2Q96CS7 222 aa9.6□□□□□ -0.87
RAB11FIP3-209ENST00000483002 LINC00158P58513 81 aa9.59□□□□□ -0.87
RAB11FIP3-209ENST00000483002 A0A0U1RRA0 63 aa9.58□□□□□ -0.88
RAB11FIP3-209ENST00000483002 SFTA2Q6UW10 78 aa9.58□□□□□ -0.88
RAB11FIP3-209ENST00000483002 HIGD2AQ9BW72 106 aa9.58□□□□□ -0.88
RAB11FIP3-209ENST00000483002 IGLV7-46A0A075B6I9 117 aa9.57□□□□□ -0.88
RAB11FIP3-209ENST00000483002 C3orf22Q8N5N4 141 aa9.57□□□□□ -0.88
RAB11FIP3-209ENST00000483002 CDIP1Q9H305 208 aa9.57□□□□□ -0.88
RAB11FIP3-209ENST00000483002 CHTOPQ9Y3Y2 248 aaKnown RBP9.57□□□□□ -0.88
RAB11FIP3-209ENST00000483002 ATP6V1G1O75348 118 aa9.53□□□□□ -0.88
RAB11FIP3-209ENST00000483002 CTAG1AP78358 180 aa9.53□□□□□ -0.88
RAB11FIP3-209ENST00000483002 TPRXLQ17RH7 258 aa9.53□□□□□ -0.88
RAB11FIP3-209ENST00000483002 TMEM223A0PJW6 202 aa9.52□□□□□ -0.89
RAB11FIP3-209ENST00000483002 APOC3P02656 99 aa9.52□□□□□ -0.89
RAB11FIP3-209ENST00000483002 SPRR4Q96PI1 79 aa9.52□□□□□ -0.89
RAB11FIP3-209ENST00000483002 SMIM13P0DJ93 91 aa9.51□□□□□ -0.89
RAB11FIP3-209ENST00000483002 MEIG1Q5JSS6 88 aa9.5□□□□□ -0.89
RAB11FIP3-209ENST00000483002 BOD1L2Q8IYS8 172 aa9.5□□□□□ -0.89
RAB11FIP3-209ENST00000483002 IFI27L1Q96BM0 104 aa9.5□□□□□ -0.89
RAB11FIP3-209ENST00000483002 PPDPFQ9H3Y8 114 aa9.5□□□□□ -0.89
RAB11FIP3-209ENST00000483002 TRAV12-1A0A0B4J245 112 aa9.49□□□□□ -0.89
RAB11FIP3-209ENST00000483002 C4orf48Q5BLP8 95 aa9.49□□□□□ -0.89
RAB11FIP3-209ENST00000483002 SPAG11AQ6PDA7 123 aa9.49□□□□□ -0.89
RAB11FIP3-209ENST00000483002 NCR3O14931 201 aa9.48□□□□□ -0.89
RAB11FIP3-209ENST00000483002 MIR7-3HGQ8N6C7 128 aa9.48□□□□□ -0.89
RAB11FIP3-209ENST00000483002 CHCHD1Q96BP2 118 aaKnown RBP9.48□□□□□ -0.89
RAB11FIP3-209ENST00000483002 ZNF706Q9Y5V0 76 aaPredicted RBP9.48□□□□□ -0.89
RAB11FIP3-209ENST00000483002 PRYO14603 147 aa9.47□□□□□ -0.89
RAB11FIP3-209ENST00000483002 SNAPINO95295 136 aa9.47□□□□□ -0.89
RAB11FIP3-209ENST00000483002 LCE2AQ5TA79 106 aaPredicted RBP9.47□□□□□ -0.89
RAB11FIP3-209ENST00000483002 SVBPQ8N300 66 aa9.46□□□□□ -0.9
RAB11FIP3-209ENST00000483002 DAND5Q8N907 189 aa9.46□□□□□ -0.9
RAB11FIP3-209ENST00000483002 SMCR5Q8TEV8 140 aa9.46□□□□□ -0.9
RAB11FIP3-209ENST00000483002 HERV-K104P63124 156 aa9.45□□□□□ -0.9
RAB11FIP3-209ENST00000483002 NDUFA5Q16718 116 aa9.45□□□□□ -0.9
RAB11FIP3-209ENST00000483002 LINC00337Q8N6G1 96 aa9.45□□□□□ -0.9
RAB11FIP3-209ENST00000483002 KRTAP9-2Q9BYQ4 174 aa9.45□□□□□ -0.9
RAB11FIP3-209ENST00000483002 KCNQ1DNQ9H478 68 aa9.45□□□□□ -0.9
RAB11FIP3-209ENST00000483002 ETDCA0A1B0GVM5 59 aa9.44□□□□□ -0.9
RAB11FIP3-209ENST00000483002 FAM19A2Q8N3H0 131 aa9.44□□□□□ -0.9
RAB11FIP3-209ENST00000483002 Q8NBF4 154 aa9.44□□□□□ -0.9
RAB11FIP3-209ENST00000483002 NDUFA12Q9UI09 145 aa9.44□□□□□ -0.9
RAB11FIP3-209ENST00000483002 TRBV10-3A0A0K0K1G6 114 aa9.43□□□□□ -0.9
RAB11FIP3-209ENST00000483002 LINC00587B1AMM8 73 aa9.43□□□□□ -0.9
RAB11FIP3-209ENST00000483002 SPRR1AP35321 89 aa9.43□□□□□ -0.9
RAB11FIP3-209ENST00000483002 FAT4Q6V0I7 4981 aa9.43□□□□□ -0.9
RAB11FIP3-209ENST00000483002 MYMXA0A1B0GTQ4 84 aa9.42□□□□□ -0.9
RAB11FIP3-209ENST00000483002 KRTAP4-16G5E9R7 235 aaPredicted RBP9.42□□□□□ -0.9
RAB11FIP3-209ENST00000483002 H0Y8G0 127 aa9.42□□□□□ -0.9
RAB11FIP3-209ENST00000483002 HSBP1O75506 76 aa9.42□□□□□ -0.9
RAB11FIP3-209ENST00000483002 FP248Q71RG6 208 aaPredicted RBP9.41□□□□□ -0.9
RAB11FIP3-209ENST00000483002 YPEL4Q96NS1 127 aa9.41□□□□□ -0.9
RAB11FIP3-209ENST00000483002 MAP1LC3CQ9BXW4 147 aa9.41□□□□□ -0.9
RAB11FIP3-209ENST00000483002 GAGE2AQ6NT46 116 aa9.4□□□□□ -0.9
RAB11FIP3-209ENST00000483002 MUC17Q685J3 4493 aa9.39□□□□□ -0.91
RAB11FIP3-209ENST00000483002 S100A12P80511 92 aa9.39□□□□□ -0.91
RAB11FIP3-209ENST00000483002 SPINK1P00995 79 aa9.38□□□□□ -0.91
RAB11FIP3-209ENST00000483002 B5MCH6 92 aa9.37□□□□□ -0.91
RAB11FIP3-209ENST00000483002 TSPEAR-AS2P59090 65 aa9.37□□□□□ -0.91
RAB11FIP3-209ENST00000483002 ERC2-IT1O76042 136 aa9.36□□□□□ -0.91
RAB11FIP3-209ENST00000483002 DDTP30046 118 aa9.36□□□□□ -0.91
RAB11FIP3-209ENST00000483002 KRTAP13-3Q3SY46 172 aa9.36□□□□□ -0.91
RAB11FIP3-209ENST00000483002 LINC00483Q53H64 154 aa9.36□□□□□ -0.91
RAB11FIP3-209ENST00000483002 IGLV9-49A0A0B4J1Y8 123 aa9.35□□□□□ -0.91
RAB11FIP3-209ENST00000483002 LEPROTO15243 131 aa9.35□□□□□ -0.91
RAB11FIP3-209ENST00000483002 LEPROTL1O95214 131 aa9.35□□□□□ -0.91
RAB11FIP3-209ENST00000483002 LOC107984156A0A0G2JMH3 177 aa9.34□□□□□ -0.91
RAB11FIP3-209ENST00000483002 MOBPQ13875 183 aa9.34□□□□□ -0.91
RAB11FIP3-209ENST00000483002 ARL17AQ8IVW1 177 aa9.34□□□□□ -0.91
RAB11FIP3-209ENST00000483002 TRBV10-2A0A0K0K1G8 114 aa9.33□□□□□ -0.92
RAB11FIP3-209ENST00000483002 TRGC2P03986 189 aa9.33□□□□□ -0.92
RAB11FIP3-209ENST00000483002 J3QQQ9 107 aa9.32□□□□□ -0.92
RAB11FIP3-209ENST00000483002 SERF1AO75920 110 aa9.32□□□□□ -0.92
RAB11FIP3-209ENST00000483002 PLNP26678 52 aa9.32□□□□□ -0.92
RAB11FIP3-209ENST00000483002 SSBP3-AS1Q7Z2R9 100 aa9.32□□□□□ -0.92
RAB11FIP3-209ENST00000483002 Q9BRP9 147 aa9.32□□□□□ -0.92
RAB11FIP3-209ENST00000483002 MIEN1Q9BRT3 115 aa9.32□□□□□ -0.92
RAB11FIP3-209ENST00000483002 FABP4P15090 132 aa9.31□□□□□ -0.92
RAB11FIP3-209ENST00000483002 S100A7L2Q5SY68 101 aa9.31□□□□□ -0.92
RAB11FIP3-209ENST00000483002 PMCHL2Q9BQD1 86 aa9.31□□□□□ -0.92
RAB11FIP3-209ENST00000483002 LGALS3P17931 250 aaKnown RBP9.3□□□□□ -0.92
RAB11FIP3-209ENST00000483002 LINC00310P59036 64 aa9.3□□□□□ -0.92
RAB11FIP3-209ENST00000483002 HERVK_113P61574 105 aa9.3□□□□□ -0.92
RAB11FIP3-209ENST00000483002 ASB16-AS1Q495Z4 193 aa9.3□□□□□ -0.92
RAB11FIP3-209ENST00000483002 Q6ZRX8 168 aa9.3□□□□□ -0.92
RAB11FIP3-209ENST00000483002 SPANXB1Q9NS25 103 aaPredicted RBP9.3□□□□□ -0.92
RAB11FIP3-209ENST00000483002 DPM2O94777 84 aa9.29□□□□□ -0.92
RAB11FIP3-209ENST00000483002 HSPB8Q9UJY1 196 aa9.29□□□□□ -0.92
RAB11FIP3-209ENST00000483002 NMUP48645 174 aa9.28□□□□□ -0.92
RAB11FIP3-209ENST00000483002 Q8N377 158 aa9.28□□□□□ -0.92
RAB11FIP3-209ENST00000483002 NDUFC2O95298 119 aa9.27□□□□□ -0.93
RAB11FIP3-209ENST00000483002 IGLV6-57P01721 117 aa9.27□□□□□ -0.93
RAB11FIP3-209ENST00000483002 IGKCP01834 107 aa9.27□□□□□ -0.93
RAB11FIP3-209ENST00000483002 NPC2P61916 151 aa9.27□□□□□ -0.93
RAB11FIP3-209ENST00000483002 RPS29P62273 56 aaKnown RBP9.27□□□□□ -0.93
RAB11FIP3-209ENST00000483002 TRAV23DV6A0A075B6W5 121 aa9.26□□□□□ -0.93
RAB11FIP3-209ENST00000483002 SLC25A20O43772 301 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms