RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 H3BQ85 93 aa10.38□□□□□ -0.75
C9orf3-218ENST00000482056 LYPD5Q6UWN5 251 aa10.38□□□□□ -0.75
C9orf3-218ENST00000482056 ENHOQ6UWT2 76 aa10.38□□□□□ -0.75
C9orf3-218ENST00000482056 Q8NDZ9 215 aa10.38□□□□□ -0.75
C9orf3-218ENST00000482056 ATP5EP2Q5VTU8 51 aa10.37□□□□□ -0.75
C9orf3-218ENST00000482056 LINC00526Q96FQ7 95 aa10.37□□□□□ -0.75
C9orf3-218ENST00000482056 IGLV6-57P01721 117 aa10.37□□□□□ -0.75
C9orf3-218ENST00000482056 RPL18AQ02543 176 aaKnown RBP10.37□□□□□ -0.75
C9orf3-218ENST00000482056 VWFP04275 2813 aa10.37□□□□□ -0.75
C9orf3-218ENST00000482056 KMT2BQ9UMN6 2715 aaPredicted RBP10.37□□□□□ -0.75
C9orf3-218ENST00000482056 NOTCH2Q04721 2471 aa10.36□□□□□ -0.75
C9orf3-218ENST00000482056 COX7CP15954 63 aa10.36□□□□□ -0.75
C9orf3-218ENST00000482056 ZNF561-AS1K7EIQ3 104 aa10.35□□□□□ -0.75
C9orf3-218ENST00000482056 H3BNG1 76 aa10.35□□□□□ -0.75
C9orf3-218ENST00000482056 RBM3P98179 157 aaKnown RBP10.34□□□□□ -0.75
C9orf3-218ENST00000482056 UBL5Q9BZL1 73 aa10.33□□□□□ -0.76
C9orf3-218ENST00000482056 C6orf48Q9UBA6 75 aa10.33□□□□□ -0.76
C9orf3-218ENST00000482056 NSD1Q96L73 2696 aaPredicted RBP10.32□□□□□ -0.76
C9orf3-218ENST00000482056 DIRC1Q969H9 104 aa10.32□□□□□ -0.76
C9orf3-218ENST00000482056 LAMTOR3Q9UHA4 124 aa10.32□□□□□ -0.76
C9orf3-218ENST00000482056 TRAV23DV6A0A075B6W5 121 aa10.32□□□□□ -0.76
C9orf3-218ENST00000482056 GHRHP01286 108 aa10.32□□□□□ -0.76
C9orf3-218ENST00000482056 LOC110117498A0A087WWA1 95 aa10.3□□□□□ -0.76
C9orf3-218ENST00000482056 KPRPQ5T749 579 aaPredicted RBP10.3□□□□□ -0.76
C9orf3-218ENST00000482056 C3orf56Q8N813 242 aa10.3□□□□□ -0.76
C9orf3-218ENST00000482056 C2orf48Q96LS8 159 aa10.3□□□□□ -0.76
C9orf3-218ENST00000482056 CAMK2N2Q96S95 79 aa10.3□□□□□ -0.76
C9orf3-218ENST00000482056 TRBV10-3A0A0K0K1G6 114 aa10.3□□□□□ -0.76
C9orf3-218ENST00000482056 USP17L23D6RBM5 183 aa10.29□□□□□ -0.76
C9orf3-218ENST00000482056 PDE6GP18545 87 aa10.29□□□□□ -0.76
C9orf3-218ENST00000482056 XAGE1AQ9HD64 81 aa10.29□□□□□ -0.76
C9orf3-218ENST00000482056 A0A087WVE0 104 aa10.28□□□□□ -0.76
C9orf3-218ENST00000482056 CRYGAP11844 174 aa10.28□□□□□ -0.76
C9orf3-218ENST00000482056 Q6ZQT0 140 aa10.28□□□□□ -0.76
C9orf3-218ENST00000482056 WFDC10BQ8IUB3 73 aa10.28□□□□□ -0.76
C9orf3-218ENST00000482056 SERP2Q8N6R1 65 aa10.28□□□□□ -0.76
C9orf3-218ENST00000482056 DSCR8Q96T75 97 aa10.28□□□□□ -0.76
C9orf3-218ENST00000482056 EGFEM1PQ0D2K5 195 aa10.28□□□□□ -0.76
C9orf3-218ENST00000482056 Q6ZQY7 126 aa10.28□□□□□ -0.76
C9orf3-218ENST00000482056 TENM1Q9UKZ4 2725 aa10.28□□□□□ -0.76
C9orf3-218ENST00000482056 HECTD1Q9ULT8 2610 aa10.27□□□□□ -0.77
C9orf3-218ENST00000482056 TRBV7-6A0A0J9YX20 115 aa10.27□□□□□ -0.77
C9orf3-218ENST00000482056 COX7BP24311 80 aa10.27□□□□□ -0.77
C9orf3-218ENST00000482056 SMIM20Q8N5G0 67 aa10.27□□□□□ -0.77
C9orf3-218ENST00000482056 ZNF73O43830 326 aaPredicted RBP10.26□□□□□ -0.77
C9orf3-218ENST00000482056 HIGD2BQ4VC39 106 aa10.26□□□□□ -0.77
C9orf3-218ENST00000482056 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.26□□□□□ -0.77
C9orf3-218ENST00000482056 TEP1Q99973 2627 aaKnown RBP10.26□□□□□ -0.77
C9orf3-218ENST00000482056 OTOGQ6ZRI0 2925 aa10.26□□□□□ -0.77
C9orf3-218ENST00000482056 ATRQ13535 2644 aa10.25□□□□□ -0.77
C9orf3-218ENST00000482056 M0R378 163 aa10.25□□□□□ -0.77
C9orf3-218ENST00000482056 RETNQ9HD89 108 aa10.25□□□□□ -0.77
C9orf3-218ENST00000482056 F8WDY8 70 aa10.24□□□□□ -0.77
C9orf3-218ENST00000482056 VPREB1P12018 145 aa10.23□□□□□ -0.77
C9orf3-218ENST00000482056 ELOF1P60002 83 aaKnown RBP10.23□□□□□ -0.77
C9orf3-218ENST00000482056 Q6ZTC4 211 aa10.23□□□□□ -0.77
C9orf3-218ENST00000482056 C1orf43Q9BWL3 253 aa10.23□□□□□ -0.77
C9orf3-218ENST00000482056 NDUFC2-KCTD14E9PQ53 114 aa10.23□□□□□ -0.77
C9orf3-218ENST00000482056 KRTAP26-1Q6PEX3 210 aa10.23□□□□□ -0.77
C9orf3-218ENST00000482056 Q6ZRU5 148 aa10.22□□□□□ -0.77
C9orf3-218ENST00000482056 OXLD1Q5BKU9 147 aa10.21□□□□□ -0.77
C9orf3-218ENST00000482056 C15orf56Q8N910 161 aa10.21□□□□□ -0.78
C9orf3-218ENST00000482056 UPK3BQ9BT76 320 aa10.21□□□□□ -0.78
C9orf3-218ENST00000482056 KRTAP10-11P60412 298 aa10.2□□□□□ -0.78
C9orf3-218ENST00000482056 HIVEP1P15822 2718 aa10.2□□□□□ -0.78
C9orf3-218ENST00000482056 ESRGQ1W209 222 aa10.19□□□□□ -0.78
C9orf3-218ENST00000482056 LINC01556Q5JQF7 62 aa10.19□□□□□ -0.78
C9orf3-218ENST00000482056 FAM19A1Q7Z5A9 133 aa10.19□□□□□ -0.78
C9orf3-218ENST00000482056 SVIPQ8NHG7 77 aa10.17□□□□□ -0.78
C9orf3-218ENST00000482056 IGKV2D-24A0A075B6R9 120 aa10.17□□□□□ -0.78
C9orf3-218ENST00000482056 DEFB131BA0A096LNP1 70 aa10.17□□□□□ -0.78
C9orf3-218ENST00000482056 Q6ZVQ6 151 aa10.16□□□□□ -0.78
C9orf3-218ENST00000482056 BCE1O60756 84 aa10.15□□□□□ -0.78
C9orf3-218ENST00000482056 LINC01547P58512 204 aaPredicted RBP10.15□□□□□ -0.78
C9orf3-218ENST00000482056 HAMPP81172 84 aa10.15□□□□□ -0.78
C9orf3-218ENST00000482056 C11orf45Q8TAV5 145 aa10.15□□□□□ -0.78
C9orf3-218ENST00000482056 TRBV7-4A0A0J9YYF1 115 aa10.15□□□□□ -0.78
C9orf3-218ENST00000482056 TMEM258P61165 79 aa10.15□□□□□ -0.78
C9orf3-218ENST00000482056 SYCNQ0VAF6 134 aa10.15□□□□□ -0.78
C9orf3-218ENST00000482056 CXCL6P80162 114 aa10.14□□□□□ -0.79
C9orf3-218ENST00000482056 M0R2N4 97 aa10.14□□□□□ -0.79
C9orf3-218ENST00000482056 LINC00528Q8N1L1 170 aa10.14□□□□□ -0.79
C9orf3-218ENST00000482056 J3KT08 172 aa10.13□□□□□ -0.79
C9orf3-218ENST00000482056 Q6ZRP5 223 aa10.13□□□□□ -0.79
C9orf3-218ENST00000482056 NKAPP1Q8N9T2 125 aa10.13□□□□□ -0.79
C9orf3-218ENST00000482056 TRRAPQ9Y4A5 3859 aa10.11□□□□□ -0.79
C9orf3-218ENST00000482056 DNAH10OSP0CZ25 163 aa10.1□□□□□ -0.79
C9orf3-218ENST00000482056 CYSTM1Q9H1C7 97 aa10.08□□□□□ -0.8
C9orf3-218ENST00000482056 KCNQ1DNQ9H478 68 aa10.08□□□□□ -0.8
C9orf3-218ENST00000482056 RPS28P62857 69 aaKnown RBP10.08□□□□□ -0.8
C9orf3-218ENST00000482056 TRAV7A0A075B6U4 112 aa10.07□□□□□ -0.8
C9orf3-218ENST00000482056 TLX1NBP0CAT3 122 aa10.06□□□□□ -0.8
C9orf3-218ENST00000482056 TRAV10A0A0B4J240 114 aa10.05□□□□□ -0.8
C9orf3-218ENST00000482056 PLA2G2DQ9UNK4 145 aa10.05□□□□□ -0.8
C9orf3-218ENST00000482056 KRTAP24-1Q3LI83 254 aa10.05□□□□□ -0.8
C9orf3-218ENST00000482056 C7orf33Q8WU49 177 aa10.05□□□□□ -0.8
C9orf3-218ENST00000482056 MRAPQ8TCY5 172 aa10.04□□□□□ -0.8
C9orf3-218ENST00000482056 RMI2Q96E14 147 aa10.04□□□□□ -0.8
C9orf3-218ENST00000482056 LOC107984640A0A0U1RRK4 108 aa10.03□□□□□ -0.8
C9orf3-218ENST00000482056 SERTAD4-AS1Q5TG53 156 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms