RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 SFTA2Q6UW10 78 aa13.11□□□□□ -0.31
GPCPD1-206ENST00000481690 PRLHP81277 87 aa13.09□□□□□ -0.31
GPCPD1-206ENST00000481690 FAM19A1Q7Z5A9 133 aa13.09□□□□□ -0.31
GPCPD1-206ENST00000481690 TMEM238C9JI98 176 aa13.08□□□□□ -0.32
GPCPD1-206ENST00000481690 TMEM126AQ9H061 195 aa13.08□□□□□ -0.32
GPCPD1-206ENST00000481690 LINC00158P58513 81 aa13.07□□□□□ -0.32
GPCPD1-206ENST00000481690 Q8NDZ9 215 aa13.07□□□□□ -0.32
GPCPD1-206ENST00000481690 IFI27L1Q96BM0 104 aa13.07□□□□□ -0.32
GPCPD1-206ENST00000481690 CHCHD1Q96BP2 118 aaKnown RBP13.07□□□□□ -0.32
GPCPD1-206ENST00000481690 A0A0U1RRA0 63 aa13.05□□□□□ -0.32
GPCPD1-206ENST00000481690 TMEM223A0PJW6 202 aa13.05□□□□□ -0.32
GPCPD1-206ENST00000481690 YPEL4Q96NS1 127 aa13.05□□□□□ -0.32
GPCPD1-206ENST00000481690 TRAV12-1A0A0B4J245 112 aa13.04□□□□□ -0.32
GPCPD1-206ENST00000481690 KRTAP13-2Q52LG2 175 aa13.04□□□□□ -0.32
GPCPD1-206ENST00000481690 M0R378 163 aa13.03□□□□□ -0.32
GPCPD1-206ENST00000481690 FAM229BQ4G0N7 80 aa13.02□□□□□ -0.33
GPCPD1-206ENST00000481690 ATP6V1G1O75348 118 aa13□□□□□ -0.33
GPCPD1-206ENST00000481690 HSBP1O75506 76 aa13□□□□□ -0.33
GPCPD1-206ENST00000481690 CBLN2Q8IUK8 224 aa13□□□□□ -0.33
GPCPD1-206ENST00000481690 IGKV2D-26A0A0A0MRZ7 120 aa12.99□□□□□ -0.33
GPCPD1-206ENST00000481690 MEIG1Q5JSS6 88 aa12.99□□□□□ -0.33
GPCPD1-206ENST00000481690 FAM19A2Q8N3H0 131 aa12.99□□□□□ -0.33
GPCPD1-206ENST00000481690 H0Y8G0 127 aa12.98□□□□□ -0.33
GPCPD1-206ENST00000481690 SMIM13P0DJ93 91 aa12.98□□□□□ -0.33
GPCPD1-206ENST00000481690 LINC00304Q8N9R0 145 aa12.97□□□□□ -0.33
GPCPD1-206ENST00000481690 HIGD2AQ9BW72 106 aa12.97□□□□□ -0.33
GPCPD1-206ENST00000481690 BOD1L2Q8IYS8 172 aa12.94□□□□□ -0.34
GPCPD1-206ENST00000481690 PLEKHB2Q96CS7 222 aa12.94□□□□□ -0.34
GPCPD1-206ENST00000481690 NCR3O14931 201 aa12.93□□□□□ -0.34
GPCPD1-206ENST00000481690 HERV-K104P63124 156 aa12.93□□□□□ -0.34
GPCPD1-206ENST00000481690 MIR7-3HGQ8N6C7 128 aa12.93□□□□□ -0.34
GPCPD1-206ENST00000481690 RETNLBQ9BQ08 111 aa12.93□□□□□ -0.34
GPCPD1-206ENST00000481690 TRGC2P03986 189 aa12.92□□□□□ -0.34
GPCPD1-206ENST00000481690 NDUFA12Q9UI09 145 aa12.92□□□□□ -0.34
GPCPD1-206ENST00000481690 MYMXA0A1B0GTQ4 84 aa12.89□□□□□ -0.35
GPCPD1-206ENST00000481690 PRYO14603 147 aa12.89□□□□□ -0.35
GPCPD1-206ENST00000481690 LEPROTL1O95214 131 aa12.89□□□□□ -0.35
GPCPD1-206ENST00000481690 C3orf22Q8N5N4 141 aa12.89□□□□□ -0.35
GPCPD1-206ENST00000481690 LINC00587B1AMM8 73 aa12.88□□□□□ -0.35
GPCPD1-206ENST00000481690 SERF1AO75920 110 aa12.88□□□□□ -0.35
GPCPD1-206ENST00000481690 LCE2AQ5TA79 106 aaPredicted RBP12.88□□□□□ -0.35
GPCPD1-206ENST00000481690 MAP1LC3CQ9BXW4 147 aa12.87□□□□□ -0.35
GPCPD1-206ENST00000481690 LINC00310P59036 64 aa12.86□□□□□ -0.35
GPCPD1-206ENST00000481690 TSPEAR-AS2P59090 65 aa12.86□□□□□ -0.35
GPCPD1-206ENST00000481690 SPRR4Q96PI1 79 aa12.86□□□□□ -0.35
GPCPD1-206ENST00000481690 ZNF706Q9Y5V0 76 aaPredicted RBP12.85□□□□□ -0.35
GPCPD1-206ENST00000481690 LEPROTO15243 131 aa12.84□□□□□ -0.35
GPCPD1-206ENST00000481690 PLNP26678 52 aa12.84□□□□□ -0.35
GPCPD1-206ENST00000481690 ETDCA0A1B0GVM5 59 aa12.83□□□□□ -0.36
GPCPD1-206ENST00000481690 FABP4P15090 132 aa12.83□□□□□ -0.36
GPCPD1-206ENST00000481690 DAND5Q8N907 189 aa12.83□□□□□ -0.36
GPCPD1-206ENST00000481690 KCNQ1DNQ9H478 68 aa12.83□□□□□ -0.36
GPCPD1-206ENST00000481690 HSPB8Q9UJY1 196 aa12.83□□□□□ -0.36
GPCPD1-206ENST00000481690 TRBV10-3A0A0K0K1G6 114 aa12.82□□□□□ -0.36
GPCPD1-206ENST00000481690 LINC00337Q8N6G1 96 aa12.82□□□□□ -0.36
GPCPD1-206ENST00000481690 PMCHL2Q9BQD1 86 aa12.82□□□□□ -0.36
GPCPD1-206ENST00000481690 SPRR1AP35321 89 aa12.81□□□□□ -0.36
GPCPD1-206ENST00000481690 HERVK_113P61574 105 aa12.81□□□□□ -0.36
GPCPD1-206ENST00000481690 J3QQQ9 107 aa12.8□□□□□ -0.36
GPCPD1-206ENST00000481690 DPM2O94777 84 aa12.8□□□□□ -0.36
GPCPD1-206ENST00000481690 S100A12P80511 92 aa12.8□□□□□ -0.36
GPCPD1-206ENST00000481690 LCE2CQ5TA81 110 aa12.79□□□□□ -0.36
GPCPD1-206ENST00000481690 SMCR5Q8TEV8 140 aa12.79□□□□□ -0.36
GPCPD1-206ENST00000481690 LGALS3P17931 250 aaKnown RBP12.78□□□□□ -0.36
GPCPD1-206ENST00000481690 CTAG1AP78358 180 aa12.78□□□□□ -0.36
GPCPD1-206ENST00000481690 PPDPFQ9H3Y8 114 aa12.78□□□□□ -0.36
GPCPD1-206ENST00000481690 IGLV7-46A0A075B6I9 117 aa12.77□□□□□ -0.37
GPCPD1-206ENST00000481690 IGKCP01834 107 aa12.77□□□□□ -0.37
GPCPD1-206ENST00000481690 SLC7A5P1Q8MH63 180 aa12.77□□□□□ -0.37
GPCPD1-206ENST00000481690 KRTAP4-16G5E9R7 235 aaPredicted RBP12.76□□□□□ -0.37
GPCPD1-206ENST00000481690 SPAG11AQ6PDA7 123 aa12.76□□□□□ -0.37
GPCPD1-206ENST00000481690 MIEN1Q9BRT3 115 aa12.76□□□□□ -0.37
GPCPD1-206ENST00000481690 CDIP1Q9H305 208 aa12.76□□□□□ -0.37
GPCPD1-206ENST00000481690 DDTP30046 118 aa12.75□□□□□ -0.37
GPCPD1-206ENST00000481690 NMUP48645 174 aa12.75□□□□□ -0.37
GPCPD1-206ENST00000481690 A0A0U1RQV1 116 aa12.74□□□□□ -0.37
GPCPD1-206ENST00000481690 LOC107984156A0A0G2JMH3 177 aa12.73□□□□□ -0.37
GPCPD1-206ENST00000481690 COLCA2A8K830 154 aa12.73□□□□□ -0.37
GPCPD1-206ENST00000481690 TPRXLQ17RH7 258 aa12.73□□□□□ -0.37
GPCPD1-206ENST00000481690 ARL17AQ8IVW1 177 aa12.73□□□□□ -0.37
GPCPD1-206ENST00000481690 Q8NBF4 154 aa12.73□□□□□ -0.37
GPCPD1-206ENST00000481690 MUC2Q02817 5179 aa12.72□□□□□ -0.37
GPCPD1-206ENST00000481690 TRBV10-2A0A0K0K1G8 114 aa12.72□□□□□ -0.37
GPCPD1-206ENST00000481690 SPANXB1Q9NS25 103 aaPredicted RBP12.72□□□□□ -0.37
GPCPD1-206ENST00000481690 B5MCH6 92 aa12.71□□□□□ -0.37
GPCPD1-206ENST00000481690 GAGE2AQ6NT46 116 aa12.71□□□□□ -0.37
GPCPD1-206ENST00000481690 S100A7L2Q5SY68 101 aa12.7□□□□□ -0.38
GPCPD1-206ENST00000481690 NPC2P61916 151 aa12.69□□□□□ -0.38
GPCPD1-206ENST00000481690 ERC2-IT1O76042 136 aa12.67□□□□□ -0.38
GPCPD1-206ENST00000481690 LINC00483Q53H64 154 aa12.67□□□□□ -0.38
GPCPD1-206ENST00000481690 IGLV9-49A0A0B4J1Y8 123 aa12.66□□□□□ -0.38
GPCPD1-206ENST00000481690 NDUFC2O95298 119 aa12.66□□□□□ -0.38
GPCPD1-206ENST00000481690 Q6ZRX8 168 aa12.66□□□□□ -0.38
GPCPD1-206ENST00000481690 A0A0J9YXY3 114 aa12.65□□□□□ -0.38
GPCPD1-206ENST00000481690 E9PLD3 99 aa12.65□□□□□ -0.38
GPCPD1-206ENST00000481690 MOBPQ13875 183 aa12.65□□□□□ -0.38
GPCPD1-206ENST00000481690 Q9BRP9 147 aa12.65□□□□□ -0.38
GPCPD1-206ENST00000481690 TRAV23DV6A0A075B6W5 121 aa12.64□□□□□ -0.39
GPCPD1-206ENST00000481690 SOSTDC1Q6X4U4 206 aa12.64□□□□□ -0.39
GPCPD1-206ENST00000481690 IGLV6-57P01721 117 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms