RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 LINC00336Q6ZUF6 198 aa6.58□□□□□ -1.36
GARNL3-216ENST00000481242 A0A087WVE0 104 aa6.58□□□□□ -1.36
GARNL3-216ENST00000481242 ADAMTSL4-AS1Q5T5F5 129 aa6.58□□□□□ -1.36
GARNL3-216ENST00000481242 C22orf24Q9Y442 160 aa6.57□□□□□ -1.36
GARNL3-216ENST00000481242 LINC00575Q6W349 94 aa6.57□□□□□ -1.36
GARNL3-216ENST00000481242 MGAM2Q2M2H8 2515 aa6.57□□□□□ -1.36
GARNL3-216ENST00000481242 ERC2-IT1O76042 136 aa6.56□□□□□ -1.36
GARNL3-216ENST00000481242 LINC01600Q96MT4 127 aa6.56□□□□□ -1.36
GARNL3-216ENST00000481242 A0A1B0GW54 56 aa6.56□□□□□ -1.36
GARNL3-216ENST00000481242 PRR3P79522 188 aaKnown RBP6.56□□□□□ -1.36
GARNL3-216ENST00000481242 Q8NAQ8 132 aa6.56□□□□□ -1.36
GARNL3-216ENST00000481242 IGLV5-45A0A087WSX0 123 aa6.55□□□□□ -1.36
GARNL3-216ENST00000481242 NBDYA0A0U1RRE5 68 aa6.55□□□□□ -1.36
GARNL3-216ENST00000481242 SERTAD4-AS1Q5TG53 156 aa6.55□□□□□ -1.36
GARNL3-216ENST00000481242 LINC00846Q9NV44 126 aa6.54□□□□□ -1.36
GARNL3-216ENST00000481242 USP24Q9UPU5 2620 aa6.54□□□□□ -1.36
GARNL3-216ENST00000481242 A0A087WSZ3 146 aa6.54□□□□□ -1.36
GARNL3-216ENST00000481242 SMCR5Q8TEV8 140 aa6.54□□□□□ -1.36
GARNL3-216ENST00000481242 FAM229AH3BQW9 127 aa6.53□□□□□ -1.36
GARNL3-216ENST00000481242 Q6ZVQ6 151 aa6.53□□□□□ -1.36
GARNL3-216ENST00000481242 A0A087WYN8 130 aa6.53□□□□□ -1.36
GARNL3-216ENST00000481242 Q8N3U1 123 aa6.53□□□□□ -1.36
GARNL3-216ENST00000481242 IGHV6-1A0A0B4J1U7 121 aa6.52□□□□□ -1.37
GARNL3-216ENST00000481242 PRR15Q8IV56 129 aa6.52□□□□□ -1.37
GARNL3-216ENST00000481242 CYP4F30PQ9H0H9 118 aa6.52□□□□□ -1.37
GARNL3-216ENST00000481242 SPATA3Q8NHX4 192 aa6.52□□□□□ -1.37
GARNL3-216ENST00000481242 KLKP1Q107X0 134 aa6.51□□□□□ -1.37
GARNL3-216ENST00000481242 LINC00337Q8N6G1 96 aa6.51□□□□□ -1.37
GARNL3-216ENST00000481242 KTN1-AS1Q86SY8 53 aa6.51□□□□□ -1.37
GARNL3-216ENST00000481242 MAST4O15021 2626 aa6.51□□□□□ -1.37
GARNL3-216ENST00000481242 A8MTW9 85 aa6.51□□□□□ -1.37
GARNL3-216ENST00000481242 PRLHP81277 87 aa6.51□□□□□ -1.37
GARNL3-216ENST00000481242 hDV103S1A0JD37 113 aa6.5□□□□□ -1.37
GARNL3-216ENST00000481242 PSPHP1O15172 72 aa6.5□□□□□ -1.37
GARNL3-216ENST00000481242 LINC00167Q96N53 147 aa6.5□□□□□ -1.37
GARNL3-216ENST00000481242 DNAH10OSP0CZ25 163 aa6.5□□□□□ -1.37
GARNL3-216ENST00000481242 A0A096LNT2 108 aa6.5□□□□□ -1.37
GARNL3-216ENST00000481242 Q6ZRP5 223 aa6.5□□□□□ -1.37
GARNL3-216ENST00000481242 C6orf48Q9UBA6 75 aa6.5□□□□□ -1.37
GARNL3-216ENST00000481242 COL27A1Q8IZC6 1860 aaPredicted RBP6.5□□□□□ -1.37
GARNL3-216ENST00000481242 LINC00208Q96KT6 92 aa6.5□□□□□ -1.37
GARNL3-216ENST00000481242 LINC01547P58512 204 aaPredicted RBP6.49□□□□□ -1.37
GARNL3-216ENST00000481242 PCSK5Q92824 1860 aa6.49□□□□□ -1.37
GARNL3-216ENST00000481242 GVQW2A0A096LPI5 108 aaPredicted RBP6.49□□□□□ -1.37
GARNL3-216ENST00000481242 C16orf90A8MZG2 172 aa6.49□□□□□ -1.37
GARNL3-216ENST00000481242 LINC00588Q9Y4M8 146 aa6.49□□□□□ -1.37
GARNL3-216ENST00000481242 HELZ2Q9BYK8 2649 aaKnown RBP6.48□□□□□ -1.37
GARNL3-216ENST00000481242 RTL8CO15255 209 aa6.48□□□□□ -1.37
GARNL3-216ENST00000481242 FAM30AQ9NZY2 134 aa6.47□□□□□ -1.37
GARNL3-216ENST00000481242 ATP11AUNQ6ZP68 121 aa6.47□□□□□ -1.37
GARNL3-216ENST00000481242 LCA10Q71F78 164 aa6.46□□□□□ -1.37
GARNL3-216ENST00000481242 C19orf73Q9NVV2 129 aa6.45□□□□□ -1.38
GARNL3-216ENST00000481242 HCG22E2RYF7 251 aa6.45□□□□□ -1.38
GARNL3-216ENST00000481242 ATRQ13535 2644 aa6.44□□□□□ -1.38
GARNL3-216ENST00000481242 ELOF1P60002 83 aaKnown RBP6.44□□□□□ -1.38
GARNL3-216ENST00000481242 TP53AIP1Q9HCN2 124 aa6.44□□□□□ -1.38
GARNL3-216ENST00000481242 PLA2G1BP04054 148 aaKnown RBP6.44□□□□□ -1.38
GARNL3-216ENST00000481242 H3BPC8 53 aa6.43□□□□□ -1.38
GARNL3-216ENST00000481242 KIAA0087Q14695 138 aa6.43□□□□□ -1.38
GARNL3-216ENST00000481242 Q6ZRX8 168 aa6.43□□□□□ -1.38
GARNL3-216ENST00000481242 Q8NBF4 154 aa6.43□□□□□ -1.38
GARNL3-216ENST00000481242 CSNK1G2-AS1Q8NCQ2 148 aa6.43□□□□□ -1.38
GARNL3-216ENST00000481242 C7orf65Q6ZTY9 151 aa6.43□□□□□ -1.38
GARNL3-216ENST00000481242 K7EIL1 84 aa6.43□□□□□ -1.38
GARNL3-216ENST00000481242 MOBPQ13875 183 aa6.42□□□□□ -1.38
GARNL3-216ENST00000481242 H0Y9P7 68 aa6.41□□□□□ -1.38
GARNL3-216ENST00000481242 PRR4Q16378 134 aa6.41□□□□□ -1.38
GARNL3-216ENST00000481242 H7BZZ5 65 aa6.41□□□□□ -1.38
GARNL3-216ENST00000481242 PRRC2CQ9Y520 2896 aaKnown RBP6.4□□□□□ -1.38
GARNL3-216ENST00000481242 Q5XG85 94 aa6.4□□□□□ -1.38
GARNL3-216ENST00000481242 LOC110117498A0A087WWA1 95 aa6.4□□□□□ -1.39
GARNL3-216ENST00000481242 TYMSOSQ8TAI1 123 aa6.39□□□□□ -1.39
GARNL3-216ENST00000481242 SPACA4Q8TDM5 124 aa6.39□□□□□ -1.39
GARNL3-216ENST00000481242 C8orf87E5RJ46 101 aa6.39□□□□□ -1.39
GARNL3-216ENST00000481242 PHF5AQ7RTV0 110 aaKnown RBP6.38□□□□□ -1.39
GARNL3-216ENST00000481242 Q9UF83 564 aa6.38□□□□□ -1.39
GARNL3-216ENST00000481242 EPM2AB3EWF7 344 aa6.38□□□□□ -1.39
GARNL3-216ENST00000481242 LINC00612Q8N6U2 182 aa6.38□□□□□ -1.39
GARNL3-216ENST00000481242 FLNAP21333 2647 aaKnown RBP6.38□□□□□ -1.39
GARNL3-216ENST00000481242 TM2D3Q9BRN9 247 aa6.38□□□□□ -1.39
GARNL3-216ENST00000481242 GOLGB1Q14789 3259 aaKnown RBP6.37□□□□□ -1.39
GARNL3-216ENST00000481242 PRR34Q9NV39 138 aa6.37□□□□□ -1.39
GARNL3-216ENST00000481242 KRTAP10-11P60412 298 aa6.36□□□□□ -1.39
GARNL3-216ENST00000481242 RETNLBQ9BQ08 111 aa6.36□□□□□ -1.39
GARNL3-216ENST00000481242 ITPR3Q14573 2671 aa6.35□□□□□ -1.39
GARNL3-216ENST00000481242 DEFB116Q30KQ4 102 aa6.35□□□□□ -1.39
GARNL3-216ENST00000481242 LITAFQ99732 161 aa6.35□□□□□ -1.39
GARNL3-216ENST00000481242 PCOTHQ58A44 107 aa6.35□□□□□ -1.39
GARNL3-216ENST00000481242 LINC00476Q8WZB0 136 aa6.35□□□□□ -1.39
GARNL3-216ENST00000481242 KRTAP1-3Q8IUG1 177 aa6.34□□□□□ -1.39
GARNL3-216ENST00000481242 C1orf64Q8NEQ6 169 aa6.34□□□□□ -1.39
GARNL3-216ENST00000481242 RPL37AP61513 92 aaKnown RBP6.34□□□□□ -1.39
GARNL3-216ENST00000481242 IGLV6-57P01721 117 aa6.33□□□□□ -1.4
GARNL3-216ENST00000481242 Q1T7F1 81 aa6.33□□□□□ -1.4
GARNL3-216ENST00000481242 SPAG11AQ6PDA7 123 aa6.33□□□□□ -1.4
GARNL3-216ENST00000481242 IGKV2D-30A0A075B6S6 120 aa6.33□□□□□ -1.4
GARNL3-216ENST00000481242 TRBV7-4A0A0J9YYF1 115 aa6.33□□□□□ -1.4
GARNL3-216ENST00000481242 IGKV2-30P06310 120 aa6.33□□□□□ -1.4
GARNL3-216ENST00000481242 FAM218AQ96MZ4 157 aa6.33□□□□□ -1.4
GARNL3-216ENST00000481242 KCNQ1DNQ9H478 68 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms