RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 HIGD2AQ9BW72 106 aa5.35□□□□□ -1.55
SMARCE1-210ENST00000481231 TRAV9-1A0A075B6T8 112 aa5.34□□□□□ -1.55
SMARCE1-210ENST00000481231 ZNF22P17026 224 aaPredicted RBP5.34□□□□□ -1.55
SMARCE1-210ENST00000481231 LORP23490 312 aaPredicted RBP5.34□□□□□ -1.55
SMARCE1-210ENST00000481231 RAB14P61106 215 aa5.34□□□□□ -1.55
SMARCE1-210ENST00000481231 SPAG11AQ6PDA7 123 aa5.34□□□□□ -1.55
SMARCE1-210ENST00000481231 FA2HQ7L5A8 372 aa5.34□□□□□ -1.55
SMARCE1-210ENST00000481231 ZNF625Q96I27 306 aaPredicted RBP5.34□□□□□ -1.55
SMARCE1-210ENST00000481231 SPRR4Q96PI1 79 aa5.34□□□□□ -1.55
SMARCE1-210ENST00000481231 GNB1LQ9BYB4 327 aa5.34□□□□□ -1.55
SMARCE1-210ENST00000481231 CFC1BP0CG36 223 aa5.33□□□□□ -1.56
SMARCE1-210ENST00000481231 COX17Q14061 63 aa5.33□□□□□ -1.56
SMARCE1-210ENST00000481231 KRTAP13-3Q3SY46 172 aa5.33□□□□□ -1.56
SMARCE1-210ENST00000481231 FP248Q71RG6 208 aaPredicted RBP5.33□□□□□ -1.56
SMARCE1-210ENST00000481231 NDUFA6P56556 154 aa5.32□□□□□ -1.56
SMARCE1-210ENST00000481231 KRTAP10-6P60371 365 aaPredicted RBP5.32□□□□□ -1.56
SMARCE1-210ENST00000481231 KRTAP19-2Q3LHN2 52 aa5.32□□□□□ -1.56
SMARCE1-210ENST00000481231 SMCO4Q9NRQ5 59 aa5.32□□□□□ -1.56
SMARCE1-210ENST00000481231 A0A096LNJ9 63 aa5.31□□□□□ -1.56
SMARCE1-210ENST00000481231 LINC00337Q8N6G1 96 aa5.31□□□□□ -1.56
SMARCE1-210ENST00000481231 DAND5Q8N907 189 aa5.31□□□□□ -1.56
SMARCE1-210ENST00000481231 Q8NBF4 154 aa5.31□□□□□ -1.56
SMARCE1-210ENST00000481231 C11orf86A6NJI1 115 aa5.3□□□□□ -1.56
SMARCE1-210ENST00000481231 FABP9Q0Z7S8 132 aa5.3□□□□□ -1.56
SMARCE1-210ENST00000481231 ZNF706Q9Y5V0 76 aaPredicted RBP5.3□□□□□ -1.56
SMARCE1-210ENST00000481231 S100PP25815 95 aa5.29□□□□□ -1.56
SMARCE1-210ENST00000481231 LINC00158P58513 81 aa5.29□□□□□ -1.56
SMARCE1-210ENST00000481231 SFTA2Q6UW10 78 aa5.29□□□□□ -1.56
SMARCE1-210ENST00000481231 A0A0U1RRA0 63 aa5.28□□□□□ -1.56
SMARCE1-210ENST00000481231 TMEM218A2RU14 115 aa5.28□□□□□ -1.56
SMARCE1-210ENST00000481231 PMCHL1Q16048 86 aa5.28□□□□□ -1.56
SMARCE1-210ENST00000481231 CLLU1Q5K131 121 aa5.28□□□□□ -1.56
SMARCE1-210ENST00000481231 TMEM170BQ5T4T1 132 aa5.28□□□□□ -1.56
SMARCE1-210ENST00000481231 URB1-AS1Q96HZ7 61 aa5.28□□□□□ -1.56
SMARCE1-210ENST00000481231 PRYO14603 147 aa5.27□□□□□ -1.57
SMARCE1-210ENST00000481231 SPINK1P00995 79 aa5.27□□□□□ -1.57
SMARCE1-210ENST00000481231 HBDP02042 147 aa5.27□□□□□ -1.57
SMARCE1-210ENST00000481231 SEC61BP60468 96 aaKnown RBP5.27□□□□□ -1.57
SMARCE1-210ENST00000481231 COX19Q49B96 90 aa5.27□□□□□ -1.57
SMARCE1-210ENST00000481231 BAGE3Q86Y29 109 aa5.27□□□□□ -1.57
SMARCE1-210ENST00000481231 KRTAP4-16G5E9R7 235 aaPredicted RBP5.26□□□□□ -1.57
SMARCE1-210ENST00000481231 SPRR1AP35321 89 aa5.26□□□□□ -1.57
SMARCE1-210ENST00000481231 LINC00483Q53H64 154 aa5.26□□□□□ -1.57
SMARCE1-210ENST00000481231 UQCC3Q6UW78 93 aa5.26□□□□□ -1.57
SMARCE1-210ENST00000481231 BOD1L2Q8IYS8 172 aa5.26□□□□□ -1.57
SMARCE1-210ENST00000481231 C18orf32Q8TCD1 76 aa5.26□□□□□ -1.57
SMARCE1-210ENST00000481231 SMCR5Q8TEV8 140 aa5.26□□□□□ -1.57
SMARCE1-210ENST00000481231 SEC11CQ9BY50 192 aa5.26□□□□□ -1.57
SMARCE1-210ENST00000481231 KCNQ1DNQ9H478 68 aa5.26□□□□□ -1.57
SMARCE1-210ENST00000481231 SSPOA2VEC9 5147 aa5.25□□□□□ -1.57
SMARCE1-210ENST00000481231 NCR3O14931 201 aa5.25□□□□□ -1.57
SMARCE1-210ENST00000481231 LINC00614P0C842 121 aa5.25□□□□□ -1.57
SMARCE1-210ENST00000481231 SMIM13P0DJ93 91 aa5.25□□□□□ -1.57
SMARCE1-210ENST00000481231 USH2AO75445 5202 aa5.25□□□□□ -1.57
SMARCE1-210ENST00000481231 TRBV10-3A0A0K0K1G6 114 aa5.24□□□□□ -1.57
SMARCE1-210ENST00000481231 ETDCA0A1B0GVM5 59 aa5.24□□□□□ -1.57
SMARCE1-210ENST00000481231 TMEM223A0PJW6 202 aa5.24□□□□□ -1.57
SMARCE1-210ENST00000481231 GAGE2AQ6NT46 116 aa5.24□□□□□ -1.57
SMARCE1-210ENST00000481231 CHTOPQ9Y3Y2 248 aaKnown RBP5.24□□□□□ -1.57
SMARCE1-210ENST00000481231 ATP6V1G1O75348 118 aa5.23□□□□□ -1.57
SMARCE1-210ENST00000481231 MOBPQ13875 183 aa5.23□□□□□ -1.57
SMARCE1-210ENST00000481231 Q8N377 158 aa5.23□□□□□ -1.57
SMARCE1-210ENST00000481231 MIR7-3HGQ8N6C7 128 aa5.23□□□□□ -1.57
SMARCE1-210ENST00000481231 NDUFA12Q9UI09 145 aa5.23□□□□□ -1.57
SMARCE1-210ENST00000481231 IGLV9-49A0A0B4J1Y8 123 aa5.22□□□□□ -1.57
SMARCE1-210ENST00000481231 ERC2-IT1O76042 136 aa5.22□□□□□ -1.57
SMARCE1-210ENST00000481231 GHRHP01286 108 aa5.22□□□□□ -1.57
SMARCE1-210ENST00000481231 RPS29P62273 56 aaKnown RBP5.22□□□□□ -1.57
SMARCE1-210ENST00000481231 MEIG1Q5JSS6 88 aa5.22□□□□□ -1.57
SMARCE1-210ENST00000481231 TRAPPC1Q9Y5R8 145 aa5.22□□□□□ -1.57
SMARCE1-210ENST00000481231 FCGBPQ9Y6R7 5405 aaPredicted RBP5.21□□□□□ -1.58
SMARCE1-210ENST00000481231 B5MCH6 92 aa5.21□□□□□ -1.58
SMARCE1-210ENST00000481231 M0R2T5 61 aa5.21□□□□□ -1.58
SMARCE1-210ENST00000481231 RHEBQ15382 184 aa5.21□□□□□ -1.58
SMARCE1-210ENST00000481231 XP32Q5T750 250 aa5.21□□□□□ -1.58
SMARCE1-210ENST00000481231 FAM19A2Q8N3H0 131 aa5.21□□□□□ -1.58
SMARCE1-210ENST00000481231 RPS10P5Q9NQ39 176 aa5.21□□□□□ -1.58
SMARCE1-210ENST00000481231 TRAV12-1A0A0B4J245 112 aa5.2□□□□□ -1.58
SMARCE1-210ENST00000481231 SLC25A20O43772 301 aa5.2□□□□□ -1.58
SMARCE1-210ENST00000481231 HERV-K104P63124 156 aa5.2□□□□□ -1.58
SMARCE1-210ENST00000481231 SSBP3-AS1Q7Z2R9 100 aa5.2□□□□□ -1.58
SMARCE1-210ENST00000481231 Q9BRP9 147 aa5.2□□□□□ -1.58
SMARCE1-210ENST00000481231 IFITM2Q01629 132 aa5.19□□□□□ -1.58
SMARCE1-210ENST00000481231 C10orf91Q5T1B1 145 aa5.19□□□□□ -1.58
SMARCE1-210ENST00000481231 IFI27L1Q96BM0 104 aa5.19□□□□□ -1.58
SMARCE1-210ENST00000481231 S100A12P80511 92 aa5.18□□□□□ -1.58
SMARCE1-210ENST00000481231 Q6ZRX8 168 aa5.18□□□□□ -1.58
SMARCE1-210ENST00000481231 COMMD7Q86VX2 200 aa5.18□□□□□ -1.58
SMARCE1-210ENST00000481231 TRBV10-2A0A0K0K1G8 114 aa5.17□□□□□ -1.58
SMARCE1-210ENST00000481231 MYMXA0A1B0GTQ4 84 aa5.17□□□□□ -1.58
SMARCE1-210ENST00000481231 LINC00587B1AMM8 73 aa5.17□□□□□ -1.58
SMARCE1-210ENST00000481231 DDTP30046 118 aa5.17□□□□□ -1.58
SMARCE1-210ENST00000481231 TSPEAR-AS2P59090 65 aa5.17□□□□□ -1.58
SMARCE1-210ENST00000481231 MAP1LC3CQ9BXW4 147 aa5.17□□□□□ -1.58
SMARCE1-210ENST00000481231 LOC107984156A0A0G2JMH3 177 aa5.16□□□□□ -1.58
SMARCE1-210ENST00000481231 LOC100996750A0A140TA64 210 aa5.16□□□□□ -1.58
SMARCE1-210ENST00000481231 C9orf153Q5TBE3 101 aa5.16□□□□□ -1.58
SMARCE1-210ENST00000481231 ARL17AQ8IVW1 177 aa5.16□□□□□ -1.58
SMARCE1-210ENST00000481231 CHCHD1Q96BP2 118 aaKnown RBP5.16□□□□□ -1.58
SMARCE1-210ENST00000481231 KRTAP4-6Q9BYQ5 205 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms