RNA–Protein interactions for RNA: ENST00000481115.2

PKP4-211, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-211ENST00000481115 IGHV3-23P01764 117 aa5□□□□□ -1.61
PKP4-211ENST00000481115 LYNX1P0DP58 116 aa5□□□□□ -1.61
PKP4-211ENST00000481115 DSCR9P59020 149 aa5□□□□□ -1.61
PKP4-211ENST00000481115 UNQ9165/PRO28630Q6UXU0 137 aa5□□□□□ -1.61
PKP4-211ENST00000481115 PHF5AQ7RTV0 110 aaKnown RBP5□□□□□ -1.61
PKP4-211ENST00000481115 BPESC1Q9GZL8 116 aa5□□□□□ -1.61
PKP4-211ENST00000481115 WNK2Q9Y3S1 2297 aa5□□□□□ -1.61
PKP4-211ENST00000481115 IGHV4-30-2A0A087WSY4 118 aa4.99□□□□□ -1.61
PKP4-211ENST00000481115 A8MTW9 85 aa4.99□□□□□ -1.61
PKP4-211ENST00000481115 COX7B2Q8TF08 81 aa4.99□□□□□ -1.61
PKP4-211ENST00000481115 RETNQ9HD89 108 aa4.99□□□□□ -1.61
PKP4-211ENST00000481115 SNURFQ9Y675 71 aa4.99□□□□□ -1.61
PKP4-211ENST00000481115 TACC2O95359 2948 aa4.98□□□□□ -1.61
PKP4-211ENST00000481115 IGHV3-38A0A0C4DH36 116 aa4.98□□□□□ -1.61
PKP4-211ENST00000481115 BPY2O14599 106 aa4.98□□□□□ -1.61
PKP4-211ENST00000481115 CCL18P55774 89 aa4.98□□□□□ -1.61
PKP4-211ENST00000481115 COX17Q14061 63 aa4.98□□□□□ -1.61
PKP4-211ENST00000481115 NTM-AS1Q6ZSK4 140 aa4.98□□□□□ -1.61
PKP4-211ENST00000481115 ITPR3Q14573 2671 aa4.98□□□□□ -1.61
PKP4-211ENST00000481115 CSPG4Q6UVK1 2322 aa4.97□□□□□ -1.61
PKP4-211ENST00000481115 ACANP16112 2415 aa4.97□□□□□ -1.61
PKP4-211ENST00000481115 SETXQ7Z333 2677 aaKnown RBP4.97□□□□□ -1.61
PKP4-211ENST00000481115 TRAV10A0A0B4J240 114 aa4.97□□□□□ -1.61
PKP4-211ENST00000481115 IGHV4-61A0A0C4DH41 118 aa4.97□□□□□ -1.61
PKP4-211ENST00000481115 IGHV3-66A0A0C4DH42 116 aa4.97□□□□□ -1.61
PKP4-211ENST00000481115 NDUFB1O75438 58 aa4.97□□□□□ -1.61
PKP4-211ENST00000481115 COX6A2Q02221 97 aa4.97□□□□□ -1.61
PKP4-211ENST00000481115 ATP11AUNQ6ZP68 121 aa4.97□□□□□ -1.61
PKP4-211ENST00000481115 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.97□□□□□ -1.61
PKP4-211ENST00000481115 C11orf72Q8NBR9 251 aa4.97□□□□□ -1.61
PKP4-211ENST00000481115 OCR1Q9BZK8 76 aa4.97□□□□□ -1.61
PKP4-211ENST00000481115 CDC42SE2Q9NRR3 84 aa4.97□□□□□ -1.61
PKP4-211ENST00000481115 UBE2L6O14933 153 aa4.96□□□□□ -1.62
PKP4-211ENST00000481115 ELOF1P60002 83 aaKnown RBP4.96□□□□□ -1.62
PKP4-211ENST00000481115 LMO4P61968 165 aa4.96□□□□□ -1.62
PKP4-211ENST00000481115 RHPN1-AS1Q9BWJ2 59 aa4.96□□□□□ -1.62
PKP4-211ENST00000481115 FLNAP21333 2647 aaKnown RBP4.96□□□□□ -1.62
PKP4-211ENST00000481115 F8P00451 2351 aa4.96□□□□□ -1.62
PKP4-211ENST00000481115 UBE2AP49459 152 aa4.95□□□□□ -1.62
PKP4-211ENST00000481115 LINC00158P58513 81 aa4.95□□□□□ -1.62
PKP4-211ENST00000481115 HAMPP81172 84 aa4.95□□□□□ -1.62
PKP4-211ENST00000481115 ECSCRQ19T08 205 aa4.95□□□□□ -1.62
PKP4-211ENST00000481115 LIMD2Q9BT23 127 aa4.95□□□□□ -1.62
PKP4-211ENST00000481115 LINC00588Q9Y4M8 146 aa4.95□□□□□ -1.62
PKP4-211ENST00000481115 TLN2Q9Y4G6 2542 aa4.94□□□□□ -1.62
PKP4-211ENST00000481115 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.94□□□□□ -1.62
PKP4-211ENST00000481115 IGHV3OR16-8A0A075B7F1 116 aa4.94□□□□□ -1.62
PKP4-211ENST00000481115 K7EQG2 157 aa4.94□□□□□ -1.62
PKP4-211ENST00000481115 IGHV4-59P01825 116 aa4.94□□□□□ -1.62
PKP4-211ENST00000481115 FAM229BQ4G0N7 80 aa4.94□□□□□ -1.62
PKP4-211ENST00000481115 LINC00575Q6W349 94 aa4.94□□□□□ -1.62
PKP4-211ENST00000481115 Q6ZRP5 223 aa4.94□□□□□ -1.62
PKP4-211ENST00000481115 WFDC9Q8NEX5 89 aa4.94□□□□□ -1.62
PKP4-211ENST00000481115 IGHV3OR16-13A0A075B7E8 117 aa4.93□□□□□ -1.62
PKP4-211ENST00000481115 A0A087X002 238 aa4.93□□□□□ -1.62
PKP4-211ENST00000481115 TRBV6-8A0A0A6YYG3 113 aa4.93□□□□□ -1.62
PKP4-211ENST00000481115 IGHV3-74A0A0B4J1X5 117 aa4.93□□□□□ -1.62
PKP4-211ENST00000481115 KRTAP1-1Q07627 177 aa4.93□□□□□ -1.62
PKP4-211ENST00000481115 C5orf56Q8N8D9 126 aa4.93□□□□□ -1.62
PKP4-211ENST00000481115 MAPK1IP1LQ8NDC0 245 aa4.93□□□□□ -1.62
PKP4-211ENST00000481115 KRTAP17-1Q9BYP8 105 aa4.93□□□□□ -1.62
PKP4-211ENST00000481115 RBM12B-AS1Q9P1G2 102 aa4.93□□□□□ -1.62
PKP4-211ENST00000481115 SVEP1Q4LDE5 3571 aa4.93□□□□□ -1.62
PKP4-211ENST00000481115 MAST4O15021 2626 aa4.92□□□□□ -1.62
PKP4-211ENST00000481115 B4DSR2 109 aa4.92□□□□□ -1.62
PKP4-211ENST00000481115 M0R378 163 aa4.92□□□□□ -1.62
PKP4-211ENST00000481115 MSMBP08118 114 aa4.92□□□□□ -1.62
PKP4-211ENST00000481115 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.92□□□□□ -1.62
PKP4-211ENST00000481115 Q9UF83 564 aa4.92□□□□□ -1.62
PKP4-211ENST00000481115 OTOGQ6ZRI0 2925 aa4.92□□□□□ -1.62
PKP4-211ENST00000481115 ANK3Q12955 4377 aaKnown RBP4.92□□□□□ -1.62
PKP4-211ENST00000481115 SONP18583 2426 aaKnown RBP4.92□□□□□ -1.62
PKP4-211ENST00000481115 TEX15Q9BXT5 2789 aa4.91□□□□□ -1.62
PKP4-211ENST00000481115 IGHV3-49A0A0A0MS15 119 aa4.91□□□□□ -1.62
PKP4-211ENST00000481115 TRAV22A0A0B4J277 110 aa4.91□□□□□ -1.62
PKP4-211ENST00000481115 COX7BP24311 80 aa4.91□□□□□ -1.62
PKP4-211ENST00000481115 RNASE13Q5GAN3 156 aaKnown RBP4.91□□□□□ -1.62
PKP4-211ENST00000481115 Q8IZM0 81 aa4.91□□□□□ -1.62
PKP4-211ENST00000481115 ZCCHC13Q8WW36 166 aaKnown RBP4.91□□□□□ -1.62
PKP4-211ENST00000481115 HIVEP1P15822 2718 aa4.91□□□□□ -1.62
PKP4-211ENST00000481115 HIVEP2P31629 2446 aa4.91□□□□□ -1.62
PKP4-211ENST00000481115 IGHV3OR16-9A0A0B4J2B5 98 aa4.9□□□□□ -1.63
PKP4-211ENST00000481115 SLPIP03973 132 aa4.9□□□□□ -1.63
PKP4-211ENST00000481115 NANOS2P60321 138 aaKnown RBP4.9□□□□□ -1.63
PKP4-211ENST00000481115 SYCNQ0VAF6 134 aa4.9□□□□□ -1.63
PKP4-211ENST00000481115 Q6ZTI0 123 aa4.9□□□□□ -1.63
PKP4-211ENST00000481115 ZFHX3Q15911 3703 aa4.89□□□□□ -1.63
PKP4-211ENST00000481115 ZANQ9Y493 2812 aa4.89□□□□□ -1.63
PKP4-211ENST00000481115 LOC100131303A0A0U1RQF7 123 aa4.89□□□□□ -1.63
PKP4-211ENST00000481115 G3V318 75 aa4.89□□□□□ -1.63
PKP4-211ENST00000481115 H3BPC8 53 aa4.89□□□□□ -1.63
PKP4-211ENST00000481115 ASB16-AS1Q495Z4 193 aa4.89□□□□□ -1.63
PKP4-211ENST00000481115 SPANXA2-OT1Q8N9U9 137 aa4.89□□□□□ -1.63
PKP4-211ENST00000481115 C1orf64Q8NEQ6 169 aa4.89□□□□□ -1.63
PKP4-211ENST00000481115 SMR3AQ99954 134 aa4.89□□□□□ -1.63
PKP4-211ENST00000481115 MAP1AP78559 2803 aaPredicted RBP4.89□□□□□ -1.63
PKP4-211ENST00000481115 FN1P02751 2386 aaKnown RBP4.89□□□□□ -1.63
PKP4-211ENST00000481115 PSCAO43653 123 aa4.88□□□□□ -1.63
PKP4-211ENST00000481115 FSHBP01225 129 aa4.88□□□□□ -1.63
PKP4-211ENST00000481115 IGKV4-1P06312 121 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms