RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 A0A087X002 238 aa9.03□□□□□ -0.96
LIMS3-203ENST00000480744 TRAV12-1A0A0B4J245 112 aa9.03□□□□□ -0.96
LIMS3-203ENST00000480744 S100A1P23297 94 aa9.03□□□□□ -0.96
LIMS3-203ENST00000480744 CHTOPQ9Y3Y2 248 aaKnown RBP9.03□□□□□ -0.96
LIMS3-203ENST00000480744 IGLV5-39A0A0G2JS06 123 aa9.02□□□□□ -0.97
LIMS3-203ENST00000480744 LEPROTL1O95214 131 aa9.02□□□□□ -0.97
LIMS3-203ENST00000480744 CRYGAP11844 174 aa9.01□□□□□ -0.97
LIMS3-203ENST00000480744 FABP4P15090 132 aa9.01□□□□□ -0.97
LIMS3-203ENST00000480744 PFN2P35080 140 aa9.01□□□□□ -0.97
LIMS3-203ENST00000480744 UBE2AP49459 152 aa9.01□□□□□ -0.97
LIMS3-203ENST00000480744 TYMSOSQ8TAI1 123 aa9.01□□□□□ -0.97
LIMS3-203ENST00000480744 IGLV5-37A0A075B6J1 123 aa9□□□□□ -0.97
LIMS3-203ENST00000480744 H0Y8G0 127 aa9□□□□□ -0.97
LIMS3-203ENST00000480744 ANAPC11Q9NYG5 84 aa9□□□□□ -0.97
LIMS3-203ENST00000480744 IGKV2-28A0A075B6P5 120 aa8.99□□□□□ -0.97
LIMS3-203ENST00000480744 IGKV2D-28P01615 120 aa8.99□□□□□ -0.97
LIMS3-203ENST00000480744 TMEM170BQ5T4T1 132 aa8.99□□□□□ -0.97
LIMS3-203ENST00000480744 TMEM223A0PJW6 202 aa8.97□□□□□ -0.97
LIMS3-203ENST00000480744 PMCHL2Q9BQD1 86 aa8.97□□□□□ -0.97
LIMS3-203ENST00000480744 HSPB8Q9UJY1 196 aa8.97□□□□□ -0.97
LIMS3-203ENST00000480744 COA6Q5JTJ3 125 aaKnown RBP8.96□□□□□ -0.98
LIMS3-203ENST00000480744 KRTAP13-1Q8IUC0 172 aa8.96□□□□□ -0.98
LIMS3-203ENST00000480744 ERG28Q9UKR5 140 aa8.96□□□□□ -0.98
LIMS3-203ENST00000480744 PRLHP81277 87 aa8.95□□□□□ -0.98
LIMS3-203ENST00000480744 ZNF625Q96I27 306 aaPredicted RBP8.95□□□□□ -0.98
LIMS3-203ENST00000480744 SND1-IT1Q9HBX3 110 aa8.95□□□□□ -0.98
LIMS3-203ENST00000480744 KRTAP13-2Q52LG2 175 aa8.94□□□□□ -0.98
LIMS3-203ENST00000480744 FAM19A1Q7Z5A9 133 aa8.94□□□□□ -0.98
LIMS3-203ENST00000480744 TMEM238C9JI98 176 aa8.93□□□□□ -0.98
LIMS3-203ENST00000480744 VPREB1P12018 145 aa8.93□□□□□ -0.98
LIMS3-203ENST00000480744 RPL24P83731 157 aaKnown RBP8.92□□□□□ -0.98
LIMS3-203ENST00000480744 TMEM126AQ9H061 195 aa8.92□□□□□ -0.98
LIMS3-203ENST00000480744 TSPEAR-AS2P59090 65 aa8.91□□□□□ -0.98
LIMS3-203ENST00000480744 COX17Q14061 63 aa8.91□□□□□ -0.98
LIMS3-203ENST00000480744 FAM229BQ4G0N7 80 aa8.91□□□□□ -0.98
LIMS3-203ENST00000480744 MAP1LC3CQ9BXW4 147 aa8.91□□□□□ -0.98
LIMS3-203ENST00000480744 IGKV2D-26A0A0A0MRZ7 120 aa8.9□□□□□ -0.98
LIMS3-203ENST00000480744 SYS1-DBNDD2H3BUS1 97 aa8.9□□□□□ -0.98
LIMS3-203ENST00000480744 DPM2O94777 84 aa8.9□□□□□ -0.98
LIMS3-203ENST00000480744 PLNP26678 52 aa8.9□□□□□ -0.98
LIMS3-203ENST00000480744 LINC00304Q8N9R0 145 aa8.9□□□□□ -0.98
LIMS3-203ENST00000480744 RETNLBQ9BQ08 111 aa8.9□□□□□ -0.98
LIMS3-203ENST00000480744 IGKCP01834 107 aa8.89□□□□□ -0.99
LIMS3-203ENST00000480744 Q8NDZ9 215 aa8.89□□□□□ -0.99
LIMS3-203ENST00000480744 MUC2Q02817 5179 aa8.89□□□□□ -0.99
LIMS3-203ENST00000480744 M0R378 163 aa8.88□□□□□ -0.99
LIMS3-203ENST00000480744 C3orf79P0CE67 100 aa8.88□□□□□ -0.99
LIMS3-203ENST00000480744 LINC00158P58513 81 aa8.88□□□□□ -0.99
LIMS3-203ENST00000480744 SFTA2Q6UW10 78 aa8.88□□□□□ -0.99
LIMS3-203ENST00000480744 A0A0U1RRA0 63 aa8.87□□□□□ -0.99
LIMS3-203ENST00000480744 LINC01545Q5VT33 79 aa8.86□□□□□ -0.99
LIMS3-203ENST00000480744 HIGD2AQ9BW72 106 aa8.86□□□□□ -0.99
LIMS3-203ENST00000480744 A0A0U1RQV1 116 aa8.85□□□□□ -0.99
LIMS3-203ENST00000480744 LEPROTO15243 131 aa8.85□□□□□ -0.99
LIMS3-203ENST00000480744 KRTDAPP60985 99 aa8.84□□□□□ -0.99
LIMS3-203ENST00000480744 PET117Q6UWS5 81 aa8.84□□□□□ -0.99
LIMS3-203ENST00000480744 HIST3H2BBQ8N257 126 aa8.84□□□□□ -0.99
LIMS3-203ENST00000480744 PLEKHB2Q96CS7 222 aa8.84□□□□□ -0.99
LIMS3-203ENST00000480744 C3orf22Q8N5N4 141 aa8.83□□□□□ -1
LIMS3-203ENST00000480744 NDUFA12Q9UI09 145 aa8.83□□□□□ -1
LIMS3-203ENST00000480744 J3QQQ9 107 aa8.82□□□□□ -1
LIMS3-203ENST00000480744 SMIM13P0DJ93 91 aa8.81□□□□□ -1
LIMS3-203ENST00000480744 HERVK_113P61574 105 aa8.81□□□□□ -1
LIMS3-203ENST00000480744 MEIG1Q5JSS6 88 aa8.81□□□□□ -1
LIMS3-203ENST00000480744 HIST1H2BLQ99880 126 aa8.81□□□□□ -1
LIMS3-203ENST00000480744 IGLV7-46A0A075B6I9 117 aa8.8□□□□□ -1
LIMS3-203ENST00000480744 E9PLD3 99 aa8.8□□□□□ -1
LIMS3-203ENST00000480744 CDIP1Q9H305 208 aa8.8□□□□□ -1
LIMS3-203ENST00000480744 MYMXA0A1B0GTQ4 84 aa8.79□□□□□ -1
LIMS3-203ENST00000480744 NCR3O14931 201 aa8.79□□□□□ -1
LIMS3-203ENST00000480744 HERV-K104P63124 156 aa8.79□□□□□ -1
LIMS3-203ENST00000480744 BOD1L2Q8IYS8 172 aa8.79□□□□□ -1
LIMS3-203ENST00000480744 SPRR4Q96PI1 79 aa8.78□□□□□ -1
LIMS3-203ENST00000480744 PRYO14603 147 aa8.77□□□□□ -1.01
LIMS3-203ENST00000480744 LGALS3P17931 250 aaKnown RBP8.77□□□□□ -1.01
LIMS3-203ENST00000480744 ATOH7Q8N100 152 aa8.77□□□□□ -1.01
LIMS3-203ENST00000480744 MIR7-3HGQ8N6C7 128 aa8.77□□□□□ -1.01
LIMS3-203ENST00000480744 TTTY13Q9BZ97 58 aa8.77□□□□□ -1.01
LIMS3-203ENST00000480744 ZNF706Q9Y5V0 76 aaPredicted RBP8.77□□□□□ -1.01
LIMS3-203ENST00000480744 SNRPEP62304 92 aaKnown RBP8.76□□□□□ -1.01
LIMS3-203ENST00000480744 TPRXLQ17RH7 258 aa8.76□□□□□ -1.01
LIMS3-203ENST00000480744 DAND5Q8N907 189 aa8.76□□□□□ -1.01
LIMS3-203ENST00000480744 S100A6P06703 90 aa8.75□□□□□ -1.01
LIMS3-203ENST00000480744 NMUP48645 174 aa8.75□□□□□ -1.01
LIMS3-203ENST00000480744 CTAG1AP78358 180 aa8.75□□□□□ -1.01
LIMS3-203ENST00000480744 ETDCA0A1B0GVM5 59 aa8.74□□□□□ -1.01
LIMS3-203ENST00000480744 ANKRD39Q53RE8 183 aa8.74□□□□□ -1.01
LIMS3-203ENST00000480744 C4orf48Q5BLP8 95 aa8.74□□□□□ -1.01
LIMS3-203ENST00000480744 SPAG11AQ6PDA7 123 aa8.74□□□□□ -1.01
LIMS3-203ENST00000480744 PPDPFQ9H3Y8 114 aa8.74□□□□□ -1.01
LIMS3-203ENST00000480744 A0A0J9YXY3 114 aa8.73□□□□□ -1.01
LIMS3-203ENST00000480744 C20orf202A1L168 122 aa8.73□□□□□ -1.01
LIMS3-203ENST00000480744 C5orf52A6NGY3 159 aa8.73□□□□□ -1.01
LIMS3-203ENST00000480744 S100A2P29034 98 aa8.73□□□□□ -1.01
LIMS3-203ENST00000480744 LINC00337Q8N6G1 96 aa8.73□□□□□ -1.01
LIMS3-203ENST00000480744 SMCR5Q8TEV8 140 aa8.73□□□□□ -1.01
LIMS3-203ENST00000480744 MUC17Q685J3 4493 aa8.72□□□□□ -1.01
LIMS3-203ENST00000480744 TRBV10-3A0A0K0K1G6 114 aa8.72□□□□□ -1.01
LIMS3-203ENST00000480744 LINC00587B1AMM8 73 aa8.72□□□□□ -1.01
LIMS3-203ENST00000480744 EIF4EBP3O60516 100 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms