RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 SDIM1Q6ZPB5 146 aa11.29□□□□□ -0.6
UPF3A-206ENST00000480362 KRTAP10-2P60368 255 aa11.28□□□□□ -0.6
UPF3A-206ENST00000480362 BATFQ16520 125 aa11.28□□□□□ -0.6
UPF3A-206ENST00000480362 C9orf129Q5T035 196 aaKnown RBP11.28□□□□□ -0.6
UPF3A-206ENST00000480362 PKIGQ9Y2B9 76 aa11.28□□□□□ -0.6
UPF3A-206ENST00000480362 RYR2Q92736 4967 aa11.27□□□□□ -0.61
UPF3A-206ENST00000480362 A0A096LNI7 61 aa11.27□□□□□ -0.61
UPF3A-206ENST00000480362 PGPEP1Q9NXJ5 209 aa11.27□□□□□ -0.61
UPF3A-206ENST00000480362 TMEM238LA0A1B0GVL6 79 aa11.26□□□□□ -0.61
UPF3A-206ENST00000480362 A6NJY4 79 aa11.26□□□□□ -0.61
UPF3A-206ENST00000480362 C16orf90A8MZG2 172 aa11.26□□□□□ -0.61
UPF3A-206ENST00000480362 SNHG12Q9BXW3 62 aa11.26□□□□□ -0.61
UPF3A-206ENST00000480362 IGKV2-24A0A0C4DH68 120 aa11.25□□□□□ -0.61
UPF3A-206ENST00000480362 Q8NDZ9 215 aa11.24□□□□□ -0.61
UPF3A-206ENST00000480362 NHP2Q9NX24 153 aaKnown RBP11.24□□□□□ -0.61
UPF3A-206ENST00000480362 NDUFC2O95298 119 aa11.23□□□□□ -0.61
UPF3A-206ENST00000480362 PRR3P79522 188 aaKnown RBP11.23□□□□□ -0.61
UPF3A-206ENST00000480362 A6NDN8 102 aa11.22□□□□□ -0.61
UPF3A-206ENST00000480362 CHTF8P0CG12 524 aa11.22□□□□□ -0.61
UPF3A-206ENST00000480362 CFC1BP0CG36 223 aa11.22□□□□□ -0.61
UPF3A-206ENST00000480362 CFC1P0CG37 223 aa11.22□□□□□ -0.61
UPF3A-206ENST00000480362 IGKV2-28A0A075B6P5 120 aa11.2□□□□□ -0.62
UPF3A-206ENST00000480362 FAM168BA1KXE4 195 aa11.2□□□□□ -0.62
UPF3A-206ENST00000480362 IGKV2D-28P01615 120 aa11.2□□□□□ -0.62
UPF3A-206ENST00000480362 VPREB1P12018 145 aa11.2□□□□□ -0.62
UPF3A-206ENST00000480362 SERTAD4-AS1Q5TG53 156 aa11.2□□□□□ -0.62
UPF3A-206ENST00000480362 PLA2G2DQ9UNK4 145 aa11.2□□□□□ -0.62
UPF3A-206ENST00000480362 A0A1B0GVY2 172 aa11.19□□□□□ -0.62
UPF3A-206ENST00000480362 A0A1B0GWB2 263 aa11.19□□□□□ -0.62
UPF3A-206ENST00000480362 K7ERJ3 54 aa11.19□□□□□ -0.62
UPF3A-206ENST00000480362 RAB37Q96AX2 223 aa11.19□□□□□ -0.62
UPF3A-206ENST00000480362 LINC00474Q9P2X8 69 aa11.19□□□□□ -0.62
UPF3A-206ENST00000480362 A0A0B4J2C4 111 aa11.18□□□□□ -0.62
UPF3A-206ENST00000480362 PANO1I0J062 215 aa11.18□□□□□ -0.62
UPF3A-206ENST00000480362 NCR3O14931 201 aa11.18□□□□□ -0.62
UPF3A-206ENST00000480362 DPH3Q96FX2 82 aa11.18□□□□□ -0.62
UPF3A-206ENST00000480362 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.18□□□□□ -0.62
UPF3A-206ENST00000480362 RYR3Q15413 4870 aa11.17□□□□□ -0.62
UPF3A-206ENST00000480362 FAM19A5Q7Z5A7 132 aaPredicted RBP11.17□□□□□ -0.62
UPF3A-206ENST00000480362 KRTAP7-1Q8IUC3 87 aa11.17□□□□□ -0.62
UPF3A-206ENST00000480362 LINC00337Q8N6G1 96 aa11.17□□□□□ -0.62
UPF3A-206ENST00000480362 FAT2Q9NYQ8 4349 aa11.17□□□□□ -0.62
UPF3A-206ENST00000480362 A0A1W2PNN7 141 aa11.16□□□□□ -0.62
UPF3A-206ENST00000480362 SPACA4Q8TDM5 124 aa11.16□□□□□ -0.62
UPF3A-206ENST00000480362 PRO1854Q9UHT4 67 aa11.16□□□□□ -0.62
UPF3A-206ENST00000480362 IGLV5-37A0A075B6J1 123 aa11.15□□□□□ -0.62
UPF3A-206ENST00000480362 TRAV13-2A0A0B4J235 113 aa11.15□□□□□ -0.62
UPF3A-206ENST00000480362 TRBV10-2A0A0K0K1G8 114 aa11.15□□□□□ -0.62
UPF3A-206ENST00000480362 KRTAP10-1P60331 282 aa11.15□□□□□ -0.62
UPF3A-206ENST00000480362 NKAPP1Q8N9T2 125 aa11.15□□□□□ -0.62
UPF3A-206ENST00000480362 DNAH11Q96DT5 4516 aa11.15□□□□□ -0.63
UPF3A-206ENST00000480362 HECTD4Q9Y4D8 3996 aa11.15□□□□□ -0.63
UPF3A-206ENST00000480362 M0R378 163 aa11.14□□□□□ -0.63
UPF3A-206ENST00000480362 OR13C6PQ8NH95 151 aa11.14□□□□□ -0.63
UPF3A-206ENST00000480362 C22orf24Q9Y442 160 aa11.14□□□□□ -0.63
UPF3A-206ENST00000480362 RPL13AP40429 203 aaKnown RBP11.13□□□□□ -0.63
UPF3A-206ENST00000480362 COL5A1-AS1Q5SY13 56 aa11.13□□□□□ -0.63
UPF3A-206ENST00000480362 S100A7L2Q5SY68 101 aa11.12□□□□□ -0.63
UPF3A-206ENST00000480362 H7C2G1 150 aa11.11□□□□□ -0.63
UPF3A-206ENST00000480362 C7orf33Q8WU49 177 aa11.11□□□□□ -0.63
UPF3A-206ENST00000480362 FAM30AQ9NZY2 134 aa11.11□□□□□ -0.63
UPF3A-206ENST00000480362 A0A087WYN8 130 aa11.1□□□□□ -0.63
UPF3A-206ENST00000480362 GAGE10A6NGK3 116 aa11.1□□□□□ -0.63
UPF3A-206ENST00000480362 M0QXV9 152 aa11.1□□□□□ -0.63
UPF3A-206ENST00000480362 TMEM126AQ9H061 195 aa11.1□□□□□ -0.63
UPF3A-206ENST00000480362 PKD1P98161 4303 aa11.09□□□□□ -0.63
UPF3A-206ENST00000480362 TAX1BP3O14907 124 aa11.09□□□□□ -0.63
UPF3A-206ENST00000480362 IGLV6-57P01721 117 aa11.09□□□□□ -0.63
UPF3A-206ENST00000480362 MRPL55Q7Z7F7 128 aaKnown RBP11.09□□□□□ -0.63
UPF3A-206ENST00000480362 TRBV10-3A0A0K0K1G6 114 aa11.08□□□□□ -0.64
UPF3A-206ENST00000480362 TSPAN13O95857 204 aa11.08□□□□□ -0.64
UPF3A-206ENST00000480362 LINC00167Q96N53 147 aa11.08□□□□□ -0.64
UPF3A-206ENST00000480362 EPM2AB3EWF7 344 aa11.07□□□□□ -0.64
UPF3A-206ENST00000480362 Q1RN00 199 aa11.07□□□□□ -0.64
UPF3A-206ENST00000480362 LBHQ53QV2 105 aaPredicted RBP11.07□□□□□ -0.64
UPF3A-206ENST00000480362 PLAC8Q9NZF1 115 aa11.07□□□□□ -0.64
UPF3A-206ENST00000480362 Q6ZSA8 131 aa11.06□□□□□ -0.64
UPF3A-206ENST00000480362 PHF5AQ7RTV0 110 aaKnown RBP11.06□□□□□ -0.64
UPF3A-206ENST00000480362 RPL37AP8A6NKH3 93 aa11.05□□□□□ -0.64
UPF3A-206ENST00000480362 SMIM11BQ8TCY0 68 aa11.05□□□□□ -0.64
UPF3A-206ENST00000480362 NAA38Q9BRA0 125 aaKnown RBP11.05□□□□□ -0.64
UPF3A-206ENST00000480362 DNAH5Q8TE73 4624 aa11.04□□□□□ -0.64
UPF3A-206ENST00000480362 IGLV1-50A0A075B6I6 118 aa11.04□□□□□ -0.64
UPF3A-206ENST00000480362 C9orf118A6NHY6 69 aa11.04□□□□□ -0.64
UPF3A-206ENST00000480362 TRAV23DV6A0A075B6W5 121 aa11.02□□□□□ -0.65
UPF3A-206ENST00000480362 H3BUT2 72 aa11.02□□□□□ -0.65
UPF3A-206ENST00000480362 RPL28P46779 137 aaKnown RBP11.02□□□□□ -0.65
UPF3A-206ENST00000480362 PSMB2P49721 201 aa11.02□□□□□ -0.65
UPF3A-206ENST00000480362 UBE2BP63146 152 aa11.01□□□□□ -0.65
UPF3A-206ENST00000480362 CIRBP-AS1Q8TBR5 109 aa11.01□□□□□ -0.65
UPF3A-206ENST00000480362 KCNQ1DNQ9H478 68 aa11.01□□□□□ -0.65
UPF3A-206ENST00000480362 SCXQ7RTU7 201 aa11□□□□□ -0.65
UPF3A-206ENST00000480362 CBY1Q9Y3M2 126 aa11□□□□□ -0.65
UPF3A-206ENST00000480362 TRIAP1O43715 76 aa10.99□□□□□ -0.65
UPF3A-206ENST00000480362 KRTAP11-1Q8IUC1 163 aa10.99□□□□□ -0.65
UPF3A-206ENST00000480362 PRYO14603 147 aa10.98□□□□□ -0.65
UPF3A-206ENST00000480362 HAMPP81172 84 aa10.98□□□□□ -0.65
UPF3A-206ENST00000480362 ZNF73O43830 326 aaPredicted RBP10.97□□□□□ -0.65
UPF3A-206ENST00000480362 C6orf99Q4VX62 202 aa10.97□□□□□ -0.65
UPF3A-206ENST00000480362 DNAH8Q96JB1 4490 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms