RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 Q8TAT8 98 aa3.02□□□□□ -1.93
PBRM1-220ENST00000480064 KLK9Q9UKQ9 250 aa3.02□□□□□ -1.93
PBRM1-220ENST00000480064 C10orf55Q5SWW7 151 aa3.01□□□□□ -1.93
PBRM1-220ENST00000480064 ALPK2Q86TB3 2170 aa3.01□□□□□ -1.93
PBRM1-220ENST00000480064 BRWD1Q9NSI6 2320 aa3.01□□□□□ -1.93
PBRM1-220ENST00000480064 CEP192Q8TEP8 1941 aa3□□□□□ -1.93
PBRM1-220ENST00000480064 I3L2K1 104 aa3□□□□□ -1.93
PBRM1-220ENST00000480064 NCR3O14931 201 aa3□□□□□ -1.93
PBRM1-220ENST00000480064 MGPP08493 103 aa3□□□□□ -1.93
PBRM1-220ENST00000480064 TRGV2A0A075B6R0 118 aa2.99□□□□□ -1.93
PBRM1-220ENST00000480064 IGKV2-40A0A087WW87 121 aaPredicted RBP2.99□□□□□ -1.93
PBRM1-220ENST00000480064 TRBV10-1A0A0K0K1A3 114 aa2.99□□□□□ -1.93
PBRM1-220ENST00000480064 IGKV2D-40P01614 121 aaPredicted RBP2.99□□□□□ -1.93
PBRM1-220ENST00000480064 RPL39LQ96EH5 51 aaKnown RBP2.99□□□□□ -1.93
PBRM1-220ENST00000480064 BPTFQ12830 3046 aa2.99□□□□□ -1.93
PBRM1-220ENST00000480064 SMIM11BQ8TCY0 68 aa2.98□□□□□ -1.93
PBRM1-220ENST00000480064 LINC00208Q96KT6 92 aa2.98□□□□□ -1.93
PBRM1-220ENST00000480064 PRR15LQ9BU68 103 aa2.98□□□□□ -1.93
PBRM1-220ENST00000480064 DOCK10Q96BY6 2186 aa2.97□□□□□ -1.93
PBRM1-220ENST00000480064 ETDCA0A1B0GVM5 59 aa2.97□□□□□ -1.93
PBRM1-220ENST00000480064 IGKV2-29A2NJV5 120 aaPredicted RBP2.97□□□□□ -1.93
PBRM1-220ENST00000480064 K7EIM0 57 aa2.97□□□□□ -1.93
PBRM1-220ENST00000480064 RPL39P62891 51 aaKnown RBP2.97□□□□□ -1.93
PBRM1-220ENST00000480064 WFDC9Q8NEX5 89 aa2.97□□□□□ -1.93
PBRM1-220ENST00000480064 ZCCHC13Q8WW36 166 aaKnown RBP2.97□□□□□ -1.93
PBRM1-220ENST00000480064 LINC01558Q9Y6Z2 57 aa2.97□□□□□ -1.93
PBRM1-220ENST00000480064 MUC22E2RYF6 1773 aaPredicted RBP2.97□□□□□ -1.93
PBRM1-220ENST00000480064 TRBV6-4A0A1B0GX49 114 aa2.96□□□□□ -1.94
PBRM1-220ENST00000480064 MUC4Q99102 2169 aa2.95□□□□□ -1.94
PBRM1-220ENST00000480064 MYO7BQ6PIF6 2116 aa2.95□□□□□ -1.94
PBRM1-220ENST00000480064 M0QY20 66 aa2.95□□□□□ -1.94
PBRM1-220ENST00000480064 DEFB110Q30KQ9 67 aa2.95□□□□□ -1.94
PBRM1-220ENST00000480064 COX7BP24311 80 aa2.94□□□□□ -1.94
PBRM1-220ENST00000480064 KRTAP10-1P60331 282 aa2.94□□□□□ -1.94
PBRM1-220ENST00000480064 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
PBRM1-220ENST00000480064 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
PBRM1-220ENST00000480064 KRTAP26-1Q6PEX3 210 aa2.94□□□□□ -1.94
PBRM1-220ENST00000480064 PATE1Q8WXA2 126 aa2.94□□□□□ -1.94
PBRM1-220ENST00000480064 WFDC10AQ9H1F0 79 aa2.94□□□□□ -1.94
PBRM1-220ENST00000480064 NDUFA4O00483 81 aa2.93□□□□□ -1.94
PBRM1-220ENST00000480064 COX17Q14061 63 aa2.93□□□□□ -1.94
PBRM1-220ENST00000480064 KLK9Q2XQG4 91 aa2.93□□□□□ -1.94
PBRM1-220ENST00000480064 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.93□□□□□ -1.94
PBRM1-220ENST00000480064 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.93□□□□□ -1.94
PBRM1-220ENST00000480064 Q6ZRN7 208 aaPredicted RBP2.93□□□□□ -1.94
PBRM1-220ENST00000480064 COX7B2Q8TF08 81 aa2.93□□□□□ -1.94
PBRM1-220ENST00000480064 RNASE3P12724 160 aaKnown RBP2.92□□□□□ -1.94
PBRM1-220ENST00000480064 LINC00158P58513 81 aa2.92□□□□□ -1.94
PBRM1-220ENST00000480064 SPAG11BQ08648 103 aa2.92□□□□□ -1.94
PBRM1-220ENST00000480064 LINC00575Q6W349 94 aa2.92□□□□□ -1.94
PBRM1-220ENST00000480064 KCNQ1DNQ9H478 68 aa2.92□□□□□ -1.94
PBRM1-220ENST00000480064 CDKN2A-AS1Q9UH64 79 aa2.92□□□□□ -1.94
PBRM1-220ENST00000480064 SPAG17Q6Q759 2223 aa2.92□□□□□ -1.94
PBRM1-220ENST00000480064 C10orf142B7Z368 130 aa2.91□□□□□ -1.94
PBRM1-220ENST00000480064 GAFA1Q96PS6 74 aa2.91□□□□□ -1.94
PBRM1-220ENST00000480064 COL4A5P29400 1685 aa2.91□□□□□ -1.94
PBRM1-220ENST00000480064 MED12Q93074 2177 aa2.91□□□□□ -1.94
PBRM1-220ENST00000480064 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.9□□□□□ -1.95
PBRM1-220ENST00000480064 SPTY2D1-AS1A0A0U1RR47 76 aa2.9□□□□□ -1.95
PBRM1-220ENST00000480064 SPAG11AQ6PDA7 123 aa2.9□□□□□ -1.95
PBRM1-220ENST00000480064 LEAP2Q969E1 77 aa2.9□□□□□ -1.95
PBRM1-220ENST00000480064 PLAC8Q9NZF1 115 aa2.9□□□□□ -1.95
PBRM1-220ENST00000480064 USF3Q68DE3 2245 aa2.9□□□□□ -1.95
PBRM1-220ENST00000480064 INTS1Q8N201 2190 aaKnown RBP2.9□□□□□ -1.95
PBRM1-220ENST00000480064 UNC13CQ8NB66 2214 aa2.89□□□□□ -1.95
PBRM1-220ENST00000480064 CCL18P55774 89 aa2.89□□□□□ -1.95
PBRM1-220ENST00000480064 ARFGEF3Q5TH69 2177 aa2.89□□□□□ -1.95
PBRM1-220ENST00000480064 UNC79Q9P2D8 2635 aa2.89□□□□□ -1.95
PBRM1-220ENST00000480064 CACNA1GO43497 2377 aa2.88□□□□□ -1.95
PBRM1-220ENST00000480064 PCNX2A6NKB5 2137 aa2.88□□□□□ -1.95
PBRM1-220ENST00000480064 H0Y9P7 68 aa2.88□□□□□ -1.95
PBRM1-220ENST00000480064 DEFB103AP81534 67 aa2.88□□□□□ -1.95
PBRM1-220ENST00000480064 FDCSPQ8NFU4 85 aa2.87□□□□□ -1.95
PBRM1-220ENST00000480064 KAAG1Q9UBP8 84 aa2.87□□□□□ -1.95
PBRM1-220ENST00000480064 KRTAP13-4Q3LI77 160 aa2.86□□□□□ -1.95
PBRM1-220ENST00000480064 CLPSL1A2RUU4 121 aa2.85□□□□□ -1.95
PBRM1-220ENST00000480064 PRB4P10163 310 aaPredicted RBP2.85□□□□□ -1.95
PBRM1-220ENST00000480064 KRTAP10-10P60014 251 aa2.85□□□□□ -1.95
PBRM1-220ENST00000480064 DEFB112Q30KQ8 113 aa2.85□□□□□ -1.95
PBRM1-220ENST00000480064 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
PBRM1-220ENST00000480064 ESPL1Q14674 2120 aa2.84□□□□□ -1.95
PBRM1-220ENST00000480064 UQCR11O14957 56 aa2.84□□□□□ -1.95
PBRM1-220ENST00000480064 SPATA8Q6RVD6 105 aa2.84□□□□□ -1.95
PBRM1-220ENST00000480064 Q8IZM0 81 aa2.84□□□□□ -1.95
PBRM1-220ENST00000480064 CACNA1AO00555 2505 aa2.84□□□□□ -1.96
PBRM1-220ENST00000480064 KNTC1P50748 2209 aa2.83□□□□□ -1.96
PBRM1-220ENST00000480064 DEFB131BA0A096LNP1 70 aa2.83□□□□□ -1.96
PBRM1-220ENST00000480064 COX6A2Q02221 97 aa2.83□□□□□ -1.96
PBRM1-220ENST00000480064 MINOS1Q5TGZ0 78 aa2.83□□□□□ -1.96
PBRM1-220ENST00000480064 H3BUA1 57 aa2.82□□□□□ -1.96
PBRM1-220ENST00000480064 INE1O15225 51 aa2.82□□□□□ -1.96
PBRM1-220ENST00000480064 Q6ZQY7 126 aa2.82□□□□□ -1.96
PBRM1-220ENST00000480064 TP53AIP1Q9HCN2 124 aa2.82□□□□□ -1.96
PBRM1-220ENST00000480064 BAHCC1Q9P281 2608 aa2.82□□□□□ -1.96
PBRM1-220ENST00000480064 A0A096LNT2 108 aa2.81□□□□□ -1.96
PBRM1-220ENST00000480064 M0R2N4 97 aa2.81□□□□□ -1.96
PBRM1-220ENST00000480064 DMAC1Q96GE9 116 aa2.81□□□□□ -1.96
PBRM1-220ENST00000480064 USMG5Q96IX5 58 aa2.81□□□□□ -1.96
PBRM1-220ENST00000480064 IGLV5-48A0A075B6I7 105 aa2.8□□□□□ -1.96
PBRM1-220ENST00000480064 CCL3L1P16619 93 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms